RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

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Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 Rhox8Q6VSS7 320 aa29,82■■■□□ 2,36
Shroom3-204ENSMUST00000168878 Rpgrip1Q9EPQ2 1331 aa27,88■■■□□ 2,05
Shroom3-204ENSMUST00000168878 Ehmt2Q9Z148 1263 aaKnown RBP27,03■■□□□ 1,92
Shroom3-204ENSMUST00000168878 Las1lA2BE28 776 aaKnown RBP26,75■■□□□ 1,87
Shroom3-204ENSMUST00000168878 Cngb1E1AZ71 1325 aa26,69■■□□□ 1,86
Shroom3-204ENSMUST00000168878 Ccdc136Q3TVA9 1136 aa26,41■■□□□ 1,82
Shroom3-204ENSMUST00000168878 Wdr66E9Q743 1299 aa26,38■■□□□ 1,81
Shroom3-204ENSMUST00000168878 Zeb1Q64318 1117 aa26,14■■□□□ 1,77
Shroom3-204ENSMUST00000168878 Esf1Q3V1V3 845 aaKnown RBP26,13■■□□□ 1,77
Shroom3-204ENSMUST00000168878 Pelp1Q9DBD5 1123 aaKnown RBP26,09■■□□□ 1,77
Shroom3-204ENSMUST00000168878 Gab3Q8BSM5 595 aa25,98■■□□□ 1,75
Shroom3-204ENSMUST00000168878 Trim41Q5NCC3 630 aa25,93■■□□□ 1,74
Shroom3-204ENSMUST00000168878 Ube2uB1AUC4 352 aa25,84■■□□□ 1,73
Shroom3-204ENSMUST00000168878 NischQ80TM9 1593 aa25,8■■□□□ 1,72
Shroom3-204ENSMUST00000168878 Acin1Q9JIX8 1338 aaKnown RBP25,72■■□□□ 1,71
Shroom3-204ENSMUST00000168878 Npm2Q80W85 207 aa25,68■■□□□ 1,7
Shroom3-204ENSMUST00000168878 Myt1lP97500 1187 aa25,51■■□□□ 1,67
Shroom3-204ENSMUST00000168878 CenpbP27790 599 aa25,48■■□□□ 1,67
Shroom3-204ENSMUST00000168878 NefmP08553 848 aa25,45■■□□□ 1,66
Shroom3-204ENSMUST00000168878 UbtfP25976 765 aaKnown RBP25,16■■□□□ 1,62
Shroom3-204ENSMUST00000168878 Stra8P70278 393 aa25,15■■□□□ 1,62
Shroom3-204ENSMUST00000168878 Ccdc180J3QNE4 1664 aa25,12■■□□□ 1,61
Shroom3-204ENSMUST00000168878 HrcG5E8J6 738 aa25,01■■□□□ 1,59
Shroom3-204ENSMUST00000168878 Amer1Q7TS75 1132 aa25■■□□□ 1,59
Shroom3-204ENSMUST00000168878 Pcgf6Q99NA9 353 aa24,85■■□□□ 1,57
Shroom3-204ENSMUST00000168878 Cdk11bP24788 784 aaKnown RBP24,84■■□□□ 1,57
Shroom3-204ENSMUST00000168878 Slc24a1Q91WD8 1130 aa24,83■■□□□ 1,57
Shroom3-204ENSMUST00000168878 Rtl1Q7M732 1744 aa24,78■■□□□ 1,56
Shroom3-204ENSMUST00000168878 Myt1Q8CFC2 1127 aa24,62■■□□□ 1,53
Shroom3-204ENSMUST00000168878 Tnnt3Q9QZ47 272 aa24,55■■□□□ 1,52
Shroom3-204ENSMUST00000168878 Nop58Q6DFW4 536 aaKnown RBP24,53■■□□□ 1,52
Shroom3-204ENSMUST00000168878 Il27Q8K3I6 234 aa24,41■■□□□ 1,5
Shroom3-204ENSMUST00000168878 NrdcQ8BHG1 1161 aa24,38■■□□□ 1,49
Shroom3-204ENSMUST00000168878 Supt5hO55201 1082 aaKnown RBP24,35■■□□□ 1,49
Shroom3-204ENSMUST00000168878 NclP09405 707 aaKnown RBP24,32■■□□□ 1,48
Shroom3-204ENSMUST00000168878 Ttbk1Q6PCN3 1308 aa24,32■■□□□ 1,48
Shroom3-204ENSMUST00000168878 Fam50aQ9WV03 339 aaKnown RBP24,31■■□□□ 1,48
Shroom3-204ENSMUST00000168878 Anp32bQ9EST5 272 aaKnown RBP24,3■■□□□ 1,48
Shroom3-204ENSMUST00000168878 Zcchc6Q5BLK4 1491 aaKnown RBP24,24■■□□□ 1,47
Shroom3-204ENSMUST00000168878 4933416C03RikQ3V063 378 aa24,23■■□□□ 1,47
Shroom3-204ENSMUST00000168878 Ap3b1Q9Z1T1 1105 aa24,22■■□□□ 1,47
Shroom3-204ENSMUST00000168878 TonslQ6NZL6 1363 aa24,21■■□□□ 1,47
Shroom3-204ENSMUST00000168878 Ppargc1bQ8VHJ7 1014 aa24,2■■□□□ 1,46
Shroom3-204ENSMUST00000168878 NeflP08551 543 aa24,19■■□□□ 1,46
Shroom3-204ENSMUST00000168878 Neurod1Q60867 357 aa24,17■■□□□ 1,46
Shroom3-204ENSMUST00000168878 Eif5bQ05D44 1216 aaKnown RBP24,14■■□□□ 1,46
Shroom3-204ENSMUST00000168878 4930567H17RikQ3V0K5 233 aa24,07■■□□□ 1,44
Shroom3-204ENSMUST00000168878 Mier1Q5UAK0 511 aa24,05■■□□□ 1,44
Shroom3-204ENSMUST00000168878 Rtl5Q5DTT4 599 aa23,99■■□□□ 1,43
Shroom3-204ENSMUST00000168878 Abcc9P70170 1546 aa23,97■■□□□ 1,43
Shroom3-204ENSMUST00000168878 Os9Q8K2C7 672 aa23,87■■□□□ 1,41
Shroom3-204ENSMUST00000168878 ClspnQ80YR7 1315 aa23,82■■□□□ 1,4
Shroom3-204ENSMUST00000168878 Anp32aO35381 247 aa23,66■■□□□ 1,38
Shroom3-204ENSMUST00000168878 Gm35339A0A140LHH9 1649 aa23,6■■□□□ 1,37
Shroom3-204ENSMUST00000168878 Plekhg3Q4VAC9 1341 aa23,6■■□□□ 1,37
Shroom3-204ENSMUST00000168878 Lmod2Q3UHZ5 550 aa23,53■■□□□ 1,36
Shroom3-204ENSMUST00000168878 Dcaf1Q80TR8 1506 aa23,43■■□□□ 1,34
Shroom3-204ENSMUST00000168878 DiexfQ8BTT6 772 aaKnown RBP23,42■■□□□ 1,34
Shroom3-204ENSMUST00000168878 Anks4bQ8K3X6 423 aa23,4■■□□□ 1,34
Shroom3-204ENSMUST00000168878 Sall2Q9QX96 1004 aa23,39■■□□□ 1,34
Shroom3-204ENSMUST00000168878 Npm1Q61937 292 aaKnown RBP23,37■■□□□ 1,33
Shroom3-204ENSMUST00000168878 DaxxO35613 739 aa23,37■■□□□ 1,33
Shroom3-204ENSMUST00000168878 Abcc8B2RUS7 1588 aa23,34■■□□□ 1,33
Shroom3-204ENSMUST00000168878 Zbtb7cQ8VCZ7 619 aa23,33■■□□□ 1,33
Shroom3-204ENSMUST00000168878 Mapk8ip2Q9ERE9 830 aa23,29■■□□□ 1,32
Shroom3-204ENSMUST00000168878 Cep164Q5DU05 1446 aa23,28■■□□□ 1,32
Shroom3-204ENSMUST00000168878 Csrnp3P59055 597 aa23,27■■□□□ 1,32
Shroom3-204ENSMUST00000168878 Eid3Q3V124 375 aa23,27■■□□□ 1,31
Shroom3-204ENSMUST00000168878 Hnrnpul2Q00PI9 745 aaKnown RBP23,25■■□□□ 1,31
Shroom3-204ENSMUST00000168878 Gm38655A0A286YDK6 273 aa23,24■■□□□ 1,31
Shroom3-204ENSMUST00000168878 Aplp2Q06335 707 aa23,24■■□□□ 1,31
Shroom3-204ENSMUST00000168878 Clip1Q922J3 1391 aa23,21■■□□□ 1,31
Shroom3-204ENSMUST00000168878 Brd4Q9ESU6 1400 aaKnown RBP23,17■■□□□ 1,3
Shroom3-204ENSMUST00000168878 Nlrp6Q91WS2 869 aa23,16■■□□□ 1,3
Shroom3-204ENSMUST00000168878 Zbtb4Q5F293 982 aa23,14■■□□□ 1,29
Shroom3-204ENSMUST00000168878 Ccer2J3QPU5 274 aa23,1■■□□□ 1,29
Shroom3-204ENSMUST00000168878 Chic1Q8CBW7 227 aa23,1■■□□□ 1,29
Shroom3-204ENSMUST00000168878 Calr4Q3TQS0 420 aa23,04■■□□□ 1,28
Shroom3-204ENSMUST00000168878 Erich6D3Z6S9 713 aa23,02■■□□□ 1,27
Shroom3-204ENSMUST00000168878 Hdac5Q9Z2V6 1113 aa23■■□□□ 1,27
Shroom3-204ENSMUST00000168878 Polr3glQ8R0C0 218 aa22,99■■□□□ 1,27
Shroom3-204ENSMUST00000168878 Gm13697A2AK42 830 aa22,95■■□□□ 1,26
Shroom3-204ENSMUST00000168878 Ppp4r2Q0VGB7 417 aa22,95■■□□□ 1,26
Shroom3-204ENSMUST00000168878 Prdm10Q3UTQ7 1184 aa22,9■■□□□ 1,26
Shroom3-204ENSMUST00000168878 Upf2A2AT37 1269 aaKnown RBP22,9■■□□□ 1,26
Shroom3-204ENSMUST00000168878 ArxO35085 564 aa22,9■■□□□ 1,26
Shroom3-204ENSMUST00000168878 Atp1b4Q99ME6 356 aa22,87■■□□□ 1,25
Shroom3-204ENSMUST00000168878 Wdr43Q6ZQL4 677 aaKnown RBP22,84■■□□□ 1,25
Shroom3-204ENSMUST00000168878 Ifnlr1Q8CGK5 535 aa22,83■■□□□ 1,24
Shroom3-204ENSMUST00000168878 Mrs2Q5NCE8 434 aa22,79■■□□□ 1,24
Shroom3-204ENSMUST00000168878 Rb1cc1Q9ESK9 1588 aa22,77■■□□□ 1,24
Shroom3-204ENSMUST00000168878 Fkbp15Q6P9Q6 1216 aaKnown RBP22,71■■□□□ 1,23
Shroom3-204ENSMUST00000168878 Chic2Q9D9G3 165 aa22,69■■□□□ 1,22
Shroom3-204ENSMUST00000168878 Rad21Q61550 635 aaKnown RBP22,68■■□□□ 1,22
Shroom3-204ENSMUST00000168878 BlmO88700 1416 aa22,67■■□□□ 1,22
Shroom3-204ENSMUST00000168878 Ccdc9Q8VC31 543 aaKnown RBP22,64■■□□□ 1,21
Shroom3-204ENSMUST00000168878 Gm13695A2AK44 830 aa22,61■■□□□ 1,21
Shroom3-204ENSMUST00000168878 Hsp90aa1P07901 733 aaKnown RBP22,61■■□□□ 1,21
Shroom3-204ENSMUST00000168878 1700123L14RikQ3V2K7 440 aa22,57■■□□□ 1,2
Shroom3-204ENSMUST00000168878 Aebp2Q9Z248 504 aaKnown RBP22,54■■□□□ 1,2
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms