RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 Rhox8Q6VSS7 320 aa29.82■■■□□ 2.36
Shroom3-204ENSMUST00000168878 Rpgrip1Q9EPQ2 1331 aa27.88■■■□□ 2.05
Shroom3-204ENSMUST00000168878 Ehmt2Q9Z148 1263 aaKnown RBP27.03■■□□□ 1.92
Shroom3-204ENSMUST00000168878 Las1lA2BE28 776 aaKnown RBP26.75■■□□□ 1.87
Shroom3-204ENSMUST00000168878 Cngb1E1AZ71 1325 aa26.69■■□□□ 1.86
Shroom3-204ENSMUST00000168878 Ccdc136Q3TVA9 1136 aa26.41■■□□□ 1.82
Shroom3-204ENSMUST00000168878 Wdr66E9Q743 1299 aa26.38■■□□□ 1.81
Shroom3-204ENSMUST00000168878 Zeb1Q64318 1117 aa26.14■■□□□ 1.77
Shroom3-204ENSMUST00000168878 Esf1Q3V1V3 845 aaKnown RBP26.13■■□□□ 1.77
Shroom3-204ENSMUST00000168878 Pelp1Q9DBD5 1123 aaKnown RBP26.09■■□□□ 1.77
Shroom3-204ENSMUST00000168878 Gab3Q8BSM5 595 aa25.98■■□□□ 1.75
Shroom3-204ENSMUST00000168878 Trim41Q5NCC3 630 aa25.93■■□□□ 1.74
Shroom3-204ENSMUST00000168878 Ube2uB1AUC4 352 aa25.84■■□□□ 1.73
Shroom3-204ENSMUST00000168878 NischQ80TM9 1593 aa25.8■■□□□ 1.72
Shroom3-204ENSMUST00000168878 Acin1Q9JIX8 1338 aaKnown RBP25.72■■□□□ 1.71
Shroom3-204ENSMUST00000168878 Npm2Q80W85 207 aa25.68■■□□□ 1.7
Shroom3-204ENSMUST00000168878 Myt1lP97500 1187 aa25.51■■□□□ 1.67
Shroom3-204ENSMUST00000168878 CenpbP27790 599 aa25.48■■□□□ 1.67
Shroom3-204ENSMUST00000168878 NefmP08553 848 aa25.45■■□□□ 1.66
Shroom3-204ENSMUST00000168878 UbtfP25976 765 aaKnown RBP25.16■■□□□ 1.62
Shroom3-204ENSMUST00000168878 Stra8P70278 393 aa25.15■■□□□ 1.62
Shroom3-204ENSMUST00000168878 Ccdc180J3QNE4 1664 aa25.12■■□□□ 1.61
Shroom3-204ENSMUST00000168878 HrcG5E8J6 738 aa25.01■■□□□ 1.59
Shroom3-204ENSMUST00000168878 Amer1Q7TS75 1132 aa25■■□□□ 1.59
Shroom3-204ENSMUST00000168878 Pcgf6Q99NA9 353 aa24.85■■□□□ 1.57
Shroom3-204ENSMUST00000168878 Cdk11bP24788 784 aaKnown RBP24.84■■□□□ 1.57
Shroom3-204ENSMUST00000168878 Slc24a1Q91WD8 1130 aa24.83■■□□□ 1.57
Shroom3-204ENSMUST00000168878 Rtl1Q7M732 1744 aa24.78■■□□□ 1.56
Shroom3-204ENSMUST00000168878 Myt1Q8CFC2 1127 aa24.62■■□□□ 1.53
Shroom3-204ENSMUST00000168878 Tnnt3Q9QZ47 272 aa24.55■■□□□ 1.52
Shroom3-204ENSMUST00000168878 Nop58Q6DFW4 536 aaKnown RBP24.53■■□□□ 1.52
Shroom3-204ENSMUST00000168878 Il27Q8K3I6 234 aa24.41■■□□□ 1.5
Shroom3-204ENSMUST00000168878 NrdcQ8BHG1 1161 aa24.38■■□□□ 1.49
Shroom3-204ENSMUST00000168878 Supt5hO55201 1082 aaKnown RBP24.35■■□□□ 1.49
Shroom3-204ENSMUST00000168878 NclP09405 707 aaKnown RBP24.32■■□□□ 1.48
Shroom3-204ENSMUST00000168878 Ttbk1Q6PCN3 1308 aa24.32■■□□□ 1.48
Shroom3-204ENSMUST00000168878 Fam50aQ9WV03 339 aaKnown RBP24.31■■□□□ 1.48
Shroom3-204ENSMUST00000168878 Anp32bQ9EST5 272 aaKnown RBP24.3■■□□□ 1.48
Shroom3-204ENSMUST00000168878 Zcchc6Q5BLK4 1491 aaKnown RBP24.24■■□□□ 1.47
Shroom3-204ENSMUST00000168878 4933416C03RikQ3V063 378 aa24.23■■□□□ 1.47
Shroom3-204ENSMUST00000168878 Ap3b1Q9Z1T1 1105 aa24.22■■□□□ 1.47
Shroom3-204ENSMUST00000168878 TonslQ6NZL6 1363 aa24.21■■□□□ 1.47
Shroom3-204ENSMUST00000168878 Ppargc1bQ8VHJ7 1014 aa24.2■■□□□ 1.46
Shroom3-204ENSMUST00000168878 NeflP08551 543 aa24.19■■□□□ 1.46
Shroom3-204ENSMUST00000168878 Neurod1Q60867 357 aa24.17■■□□□ 1.46
Shroom3-204ENSMUST00000168878 Eif5bQ05D44 1216 aaKnown RBP24.14■■□□□ 1.46
Shroom3-204ENSMUST00000168878 4930567H17RikQ3V0K5 233 aa24.07■■□□□ 1.44
Shroom3-204ENSMUST00000168878 Mier1Q5UAK0 511 aa24.05■■□□□ 1.44
Shroom3-204ENSMUST00000168878 Rtl5Q5DTT4 599 aa23.99■■□□□ 1.43
Shroom3-204ENSMUST00000168878 Abcc9P70170 1546 aa23.97■■□□□ 1.43
Shroom3-204ENSMUST00000168878 Os9Q8K2C7 672 aa23.87■■□□□ 1.41
Shroom3-204ENSMUST00000168878 ClspnQ80YR7 1315 aa23.82■■□□□ 1.4
Shroom3-204ENSMUST00000168878 Anp32aO35381 247 aa23.66■■□□□ 1.38
Shroom3-204ENSMUST00000168878 Gm35339A0A140LHH9 1649 aa23.6■■□□□ 1.37
Shroom3-204ENSMUST00000168878 Plekhg3Q4VAC9 1341 aa23.6■■□□□ 1.37
Shroom3-204ENSMUST00000168878 Lmod2Q3UHZ5 550 aa23.53■■□□□ 1.36
Shroom3-204ENSMUST00000168878 Dcaf1Q80TR8 1506 aa23.43■■□□□ 1.34
Shroom3-204ENSMUST00000168878 DiexfQ8BTT6 772 aaKnown RBP23.42■■□□□ 1.34
Shroom3-204ENSMUST00000168878 Anks4bQ8K3X6 423 aa23.4■■□□□ 1.34
Shroom3-204ENSMUST00000168878 Sall2Q9QX96 1004 aa23.39■■□□□ 1.34
Shroom3-204ENSMUST00000168878 Npm1Q61937 292 aaKnown RBP23.37■■□□□ 1.33
Shroom3-204ENSMUST00000168878 DaxxO35613 739 aa23.37■■□□□ 1.33
Shroom3-204ENSMUST00000168878 Abcc8B2RUS7 1588 aa23.34■■□□□ 1.33
Shroom3-204ENSMUST00000168878 Zbtb7cQ8VCZ7 619 aa23.33■■□□□ 1.33
Shroom3-204ENSMUST00000168878 Mapk8ip2Q9ERE9 830 aa23.29■■□□□ 1.32
Shroom3-204ENSMUST00000168878 Cep164Q5DU05 1446 aa23.28■■□□□ 1.32
Shroom3-204ENSMUST00000168878 Csrnp3P59055 597 aa23.27■■□□□ 1.32
Shroom3-204ENSMUST00000168878 Eid3Q3V124 375 aa23.27■■□□□ 1.31
Shroom3-204ENSMUST00000168878 Hnrnpul2Q00PI9 745 aaKnown RBP23.25■■□□□ 1.31
Shroom3-204ENSMUST00000168878 Gm38655A0A286YDK6 273 aa23.24■■□□□ 1.31
Shroom3-204ENSMUST00000168878 Aplp2Q06335 707 aa23.24■■□□□ 1.31
Shroom3-204ENSMUST00000168878 Clip1Q922J3 1391 aa23.21■■□□□ 1.31
Shroom3-204ENSMUST00000168878 Brd4Q9ESU6 1400 aaKnown RBP23.17■■□□□ 1.3
Shroom3-204ENSMUST00000168878 Nlrp6Q91WS2 869 aa23.16■■□□□ 1.3
Shroom3-204ENSMUST00000168878 Zbtb4Q5F293 982 aa23.14■■□□□ 1.29
Shroom3-204ENSMUST00000168878 Ccer2J3QPU5 274 aa23.1■■□□□ 1.29
Shroom3-204ENSMUST00000168878 Chic1Q8CBW7 227 aa23.1■■□□□ 1.29
Shroom3-204ENSMUST00000168878 Calr4Q3TQS0 420 aa23.04■■□□□ 1.28
Shroom3-204ENSMUST00000168878 Erich6D3Z6S9 713 aa23.02■■□□□ 1.27
Shroom3-204ENSMUST00000168878 Hdac5Q9Z2V6 1113 aa23■■□□□ 1.27
Shroom3-204ENSMUST00000168878 Polr3glQ8R0C0 218 aa22.99■■□□□ 1.27
Shroom3-204ENSMUST00000168878 Gm13697A2AK42 830 aa22.95■■□□□ 1.26
Shroom3-204ENSMUST00000168878 Ppp4r2Q0VGB7 417 aa22.95■■□□□ 1.26
Shroom3-204ENSMUST00000168878 Prdm10Q3UTQ7 1184 aa22.9■■□□□ 1.26
Shroom3-204ENSMUST00000168878 Upf2A2AT37 1269 aaKnown RBP22.9■■□□□ 1.26
Shroom3-204ENSMUST00000168878 ArxO35085 564 aa22.9■■□□□ 1.26
Shroom3-204ENSMUST00000168878 Atp1b4Q99ME6 356 aa22.87■■□□□ 1.25
Shroom3-204ENSMUST00000168878 Wdr43Q6ZQL4 677 aaKnown RBP22.84■■□□□ 1.25
Shroom3-204ENSMUST00000168878 Ifnlr1Q8CGK5 535 aa22.83■■□□□ 1.24
Shroom3-204ENSMUST00000168878 Mrs2Q5NCE8 434 aa22.79■■□□□ 1.24
Shroom3-204ENSMUST00000168878 Rb1cc1Q9ESK9 1588 aa22.77■■□□□ 1.24
Shroom3-204ENSMUST00000168878 Fkbp15Q6P9Q6 1216 aaKnown RBP22.71■■□□□ 1.23
Shroom3-204ENSMUST00000168878 Chic2Q9D9G3 165 aa22.69■■□□□ 1.22
Shroom3-204ENSMUST00000168878 Rad21Q61550 635 aaKnown RBP22.68■■□□□ 1.22
Shroom3-204ENSMUST00000168878 BlmO88700 1416 aa22.67■■□□□ 1.22
Shroom3-204ENSMUST00000168878 Ccdc9Q8VC31 543 aaKnown RBP22.64■■□□□ 1.21
Shroom3-204ENSMUST00000168878 Gm13695A2AK44 830 aa22.61■■□□□ 1.21
Shroom3-204ENSMUST00000168878 Hsp90aa1P07901 733 aaKnown RBP22.61■■□□□ 1.21
Shroom3-204ENSMUST00000168878 1700123L14RikQ3V2K7 440 aa22.57■■□□□ 1.2
Shroom3-204ENSMUST00000168878 Aebp2Q9Z248 504 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms