RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Sostdc1Q9CQN4 206 aa10.24□□□□□ -0.77
Trim11-203ENSMUST00000108810 Ss18l2Q9D174 77 aa10.24□□□□□ -0.77
Trim11-203ENSMUST00000108810 Trav13d-4A0A0G2JFX3 110 aa10.24□□□□□ -0.77
Trim11-203ENSMUST00000108810 Igkv1-99F6XWB2 120 aa10.24□□□□□ -0.77
Trim11-203ENSMUST00000108810 Hint1P70349 126 aaKnown RBP10.24□□□□□ -0.77
Trim11-203ENSMUST00000108810 PtprqP0C5E4 2300 aa10.24□□□□□ -0.77
Trim11-203ENSMUST00000108810 Igkv6-13A0A0G2JGY3 119 aa10.23□□□□□ -0.77
Trim11-203ENSMUST00000108810 CirbpP60824 172 aaKnown RBP10.23□□□□□ -0.77
Trim11-203ENSMUST00000108810 4930415O20RikQ8CDT5 131 aa10.23□□□□□ -0.77
Trim11-203ENSMUST00000108810 Tmem223Q9CQE2 199 aaKnown RBP10.23□□□□□ -0.77
Trim11-203ENSMUST00000108810 Dppa2Q9CWH0 301 aa10.23□□□□□ -0.77
Trim11-203ENSMUST00000108810 Dnah3Q8BW94 4083 aa10.23□□□□□ -0.77
Trim11-203ENSMUST00000108810 Trav7-6A0A075B640 112 aa10.23□□□□□ -0.77
Trim11-203ENSMUST00000108810 Rpl32-psP17932 135 aa10.23□□□□□ -0.77
Trim11-203ENSMUST00000108810 Dnah6E9Q0B6 4144 aa10.23□□□□□ -0.77
Trim11-203ENSMUST00000108810 Ighv8-13A0A075B5Y0 101 aa10.22□□□□□ -0.77
Trim11-203ENSMUST00000108810 Dnah10D3YYQ8 4591 aa10.21□□□□□ -0.77
Trim11-203ENSMUST00000108810 1700011M02RikB1AX35 88 aa10.21□□□□□ -0.78
Trim11-203ENSMUST00000108810 NrepQ07475 68 aa10.21□□□□□ -0.78
Trim11-203ENSMUST00000108810 Ighv8-11A0A075B5X4 119 aa10.2□□□□□ -0.78
Trim11-203ENSMUST00000108810 Gm11020F6ZGD5 61 aa10.2□□□□□ -0.78
Trim11-203ENSMUST00000108810 6430550D23RikE9Q1X6 194 aa10.19□□□□□ -0.78
Trim11-203ENSMUST00000108810 Defb10Q8R2I8 73 aa10.19□□□□□ -0.78
Trim11-203ENSMUST00000108810 Gm7137J3QMW1 236 aa10.19□□□□□ -0.78
Trim11-203ENSMUST00000108810 Eif4ebp3Q80VV3 101 aa10.19□□□□□ -0.78
Trim11-203ENSMUST00000108810 Notch1Q01705 2531 aa10.18□□□□□ -0.78
Trim11-203ENSMUST00000108810 Trav9d-4A0A0G2JG37 103 aa10.18□□□□□ -0.78
Trim11-203ENSMUST00000108810 Igkv3-9A0A140T8P4 119 aa10.18□□□□□ -0.78
Trim11-203ENSMUST00000108810 Gm10577Q3UDV9 132 aa10.18□□□□□ -0.78
Trim11-203ENSMUST00000108810 Cox11Q6P8I6 275 aa10.18□□□□□ -0.78
Trim11-203ENSMUST00000108810 Spata3Q9D9T6 193 aa10.18□□□□□ -0.78
Trim11-203ENSMUST00000108810 Defb47Q30KN1 79 aa10.17□□□□□ -0.78
Trim11-203ENSMUST00000108810 P01755 137 aa10.17□□□□□ -0.78
Trim11-203ENSMUST00000108810 Rpl13aP19253 203 aaKnown RBP10.17□□□□□ -0.78
Trim11-203ENSMUST00000108810 Prh1P05142 261 aa10.16□□□□□ -0.78
Trim11-203ENSMUST00000108810 Try10Q792Z1 246 aaKnown RBP10.16□□□□□ -0.78
Trim11-203ENSMUST00000108810 VwfQ8CIZ8 2813 aa10.16□□□□□ -0.78
Trim11-203ENSMUST00000108810 Cryba4Q9JJV0 196 aa10.16□□□□□ -0.78
Trim11-203ENSMUST00000108810 Gm10135F6TEE5 83 aa10.15□□□□□ -0.79
Trim11-203ENSMUST00000108810 Cops9Q3U898 57 aa10.15□□□□□ -0.79
Trim11-203ENSMUST00000108810 Dnah14A0A140LIJ4 4489 aa10.14□□□□□ -0.79
Trim11-203ENSMUST00000108810 Ighv2-9-1A0A075B697 116 aa10.14□□□□□ -0.79
Trim11-203ENSMUST00000108810 Ly6hQ9WUC3 139 aa10.14□□□□□ -0.79
Trim11-203ENSMUST00000108810 Trav9n-4A0A075B631 113 aa10.13□□□□□ -0.79
Trim11-203ENSMUST00000108810 Krtap11-1E9Q2E9 183 aa10.13□□□□□ -0.79
Trim11-203ENSMUST00000108810 Ociad2Q9D8W7 154 aa10.13□□□□□ -0.79
Trim11-203ENSMUST00000108810 Bles03Q8VD62 251 aa10.12□□□□□ -0.79
Trim11-203ENSMUST00000108810 4930544G11RikQ9CR99 193 aa10.12□□□□□ -0.79
Trim11-203ENSMUST00000108810 Lst1O08843 95 aa10.12□□□□□ -0.79
Trim11-203ENSMUST00000108810 CenpwQ3URR0 86 aa10.12□□□□□ -0.79
Trim11-203ENSMUST00000108810 Snhg11Q4G0K9 87 aa10.12□□□□□ -0.79
Trim11-203ENSMUST00000108810 Gm4861Q8C5A4 106 aa10.11□□□□□ -0.79
Trim11-203ENSMUST00000108810 B230359F08RikA0A0B4J1K3 109 aa10.11□□□□□ -0.79
Trim11-203ENSMUST00000108810 Gm10647E9Q8X0 124 aa10.11□□□□□ -0.79
Trim11-203ENSMUST00000108810 Fam240bJ3QMB3 78 aa10.11□□□□□ -0.79
Trim11-203ENSMUST00000108810 Cby1Q9D1C2 127 aa10.11□□□□□ -0.79
Trim11-203ENSMUST00000108810 Gm11213A0A1B0GR83 88 aa10.1□□□□□ -0.79
Trim11-203ENSMUST00000108810 Gtf2h5Q8K2X8 71 aa10.1□□□□□ -0.79
Trim11-203ENSMUST00000108810 Prss58Q8BW11 241 aa10.1□□□□□ -0.79
Trim11-203ENSMUST00000108810 EnhoQ8K1D8 76 aa10.1□□□□□ -0.79
Trim11-203ENSMUST00000108810 Igkv8-34A0A0G2JDU0 121 aa10.09□□□□□ -0.79
Trim11-203ENSMUST00000108810 2010109I03RikQ9CQ11 111 aa10.09□□□□□ -0.79
Trim11-203ENSMUST00000108810 Gm29423A0A087WRM1 55 aa10.08□□□□□ -0.8
Trim11-203ENSMUST00000108810 MalO09198 153 aa10.08□□□□□ -0.8
Trim11-203ENSMUST00000108810 Gm10549Q3URY4 149 aa10.08□□□□□ -0.8
Trim11-203ENSMUST00000108810 Lage3Q9CR70 148 aa10.08□□□□□ -0.8
Trim11-203ENSMUST00000108810 Hrct1Q9D6B9 109 aa10.08□□□□□ -0.8
Trim11-203ENSMUST00000108810 Gm16181B0V2H2 73 aa10.08□□□□□ -0.8
Trim11-203ENSMUST00000108810 SpinklQ8CEK3 90 aa10.08□□□□□ -0.8
Trim11-203ENSMUST00000108810 Pfn2Q9JJV2 140 aa10.08□□□□□ -0.8
Trim11-203ENSMUST00000108810 C530025M09RikF6RGA8 229 aa10.07□□□□□ -0.8
Trim11-203ENSMUST00000108810 PemtQ61907 199 aa10.07□□□□□ -0.8
Trim11-203ENSMUST00000108810 E130208F15RikQ3UPV3 143 aa10.06□□□□□ -0.8
Trim11-203ENSMUST00000108810 AplnQ9R0R4 77 aa10.06□□□□□ -0.8
Trim11-203ENSMUST00000108810 Igkv3-1A0A075B5P1 119 aa10.06□□□□□ -0.8
Trim11-203ENSMUST00000108810 Ighv1-56A0A0A6YXG2 117 aa10.06□□□□□ -0.8
Trim11-203ENSMUST00000108810 Wdr38Q9D994 303 aa10.05□□□□□ -0.8
Trim11-203ENSMUST00000108810 TnxbO35452 4006 aa10.05□□□□□ -0.8
Trim11-203ENSMUST00000108810 Gm12057A0A087WR21 115 aa10.05□□□□□ -0.8
Trim11-203ENSMUST00000108810 Phpt1Q9DAK9 124 aa10.05□□□□□ -0.8
Trim11-203ENSMUST00000108810 Cks1bP61025 79 aa10.04□□□□□ -0.8
Trim11-203ENSMUST00000108810 Dnah17Q69Z23 4481 aa10.04□□□□□ -0.8
Trim11-203ENSMUST00000108810 Igkv1-117A0A140T8M0 119 aa10.04□□□□□ -0.8
Trim11-203ENSMUST00000108810 SelenowP63300 88 aa10.04□□□□□ -0.8
Trim11-203ENSMUST00000108810 Tmem86bQ497J1 226 aa10.04□□□□□ -0.8
Trim11-203ENSMUST00000108810 Mzt1Q8BUR9 78 aa10.03□□□□□ -0.8
Trim11-203ENSMUST00000108810 Lgals4Q8K419 326 aa10.03□□□□□ -0.8
Trim11-203ENSMUST00000108810 Ndufa12Q7TMF3 145 aaKnown RBP10.02□□□□□ -0.8
Trim11-203ENSMUST00000108810 LbhQ9CX60 105 aa10.02□□□□□ -0.81
Trim11-203ENSMUST00000108810 Gm867A0A1W2P7T4 151 aa10.01□□□□□ -0.81
Trim11-203ENSMUST00000108810 Reg3bP35230 175 aa10.01□□□□□ -0.81
Trim11-203ENSMUST00000108810 Rpl28P41105 137 aaKnown RBP10□□□□□ -0.81
Trim11-203ENSMUST00000108810 Cox6cQ9CPQ1 76 aa10□□□□□ -0.81
Trim11-203ENSMUST00000108810 Trav13-1A0A075B644 110 aa9.99□□□□□ -0.81
Trim11-203ENSMUST00000108810 P01896 185 aa9.99□□□□□ -0.81
Trim11-203ENSMUST00000108810 Pglyrp4Q0VB07 374 aa9.99□□□□□ -0.81
Trim11-203ENSMUST00000108810 Dnah1E9Q8T7 4250 aa9.99□□□□□ -0.81
Trim11-203ENSMUST00000108810 Igsf10Q3V1M1 2594 aa9.98□□□□□ -0.81
Trim11-203ENSMUST00000108810 Q9DAQ5 155 aa9.98□□□□□ -0.81
Trim11-203ENSMUST00000108810 Igkv8-24A0A140T8P5 121 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms