RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 NischQ80TM9 1593 aa30.51■■■□□ 2.47
Trim11-203ENSMUST00000108810 Gm35339A0A140LHH9 1649 aa30.42■■■□□ 2.46
Trim11-203ENSMUST00000108810 Abcc9P70170 1546 aa29.7■■■□□ 2.35
Trim11-203ENSMUST00000108810 Abcc8B2RUS7 1588 aa29.16■■■□□ 2.26
Trim11-203ENSMUST00000108810 Rhox8Q6VSS7 320 aa27.46■■□□□ 1.99
Trim11-203ENSMUST00000108810 ScribQ80U72 1612 aa27.46■■□□□ 1.99
Trim11-203ENSMUST00000108810 Dcaf1Q80TR8 1506 aa27.18■■□□□ 1.94
Trim11-203ENSMUST00000108810 Rtl1Q7M732 1744 aa27.08■■□□□ 1.92
Trim11-203ENSMUST00000108810 Kdm5dQ62240 1548 aa26.79■■□□□ 1.88
Trim11-203ENSMUST00000108810 Rb1cc1Q9ESK9 1588 aa26.72■■□□□ 1.87
Trim11-203ENSMUST00000108810 NacadQ5SWP3 1504 aa26.61■■□□□ 1.85
Trim11-203ENSMUST00000108810 Ccdc180J3QNE4 1664 aa26.57■■□□□ 1.84
Trim11-203ENSMUST00000108810 Baz1aO88379 1555 aa26.41■■□□□ 1.82
Trim11-203ENSMUST00000108810 Zcchc6Q5BLK4 1491 aaKnown RBP26.27■■□□□ 1.8
Trim11-203ENSMUST00000108810 Sycp2Q9CUU3 1500 aa26.07■■□□□ 1.76
Trim11-203ENSMUST00000108810 Crybg2B7ZCC2 1516 aa26.05■■□□□ 1.76
Trim11-203ENSMUST00000108810 Smarca2Q6DIC0 1577 aa25.82■■□□□ 1.72
Trim11-203ENSMUST00000108810 BicraF8VPZ9 1578 aa25.58■■□□□ 1.69
Trim11-203ENSMUST00000108810 Ccdc136Q3TVA9 1136 aa25.53■■□□□ 1.68
Trim11-203ENSMUST00000108810 Cecr2E9Q2Z1 1453 aa25.21■■□□□ 1.63
Trim11-203ENSMUST00000108810 Trim41Q5NCC3 630 aa25.12■■□□□ 1.61
Trim11-203ENSMUST00000108810 HrcG5E8J6 738 aa25.1■■□□□ 1.61
Trim11-203ENSMUST00000108810 Brd4Q9ESU6 1400 aaKnown RBP25.04■■□□□ 1.6
Trim11-203ENSMUST00000108810 Synj1Q8CHC4 1574 aa24.95■■□□□ 1.58
Trim11-203ENSMUST00000108810 Smarca4Q3TKT4 1613 aaKnown RBP24.84■■□□□ 1.57
Trim11-203ENSMUST00000108810 CftrP26361 1476 aa24.83■■□□□ 1.57
Trim11-203ENSMUST00000108810 Cttnbp2B9EJA2 1648 aa24.78■■□□□ 1.56
Trim11-203ENSMUST00000108810 Golga3P55937 1487 aa24.66■■□□□ 1.54
Trim11-203ENSMUST00000108810 Cep164Q5DU05 1446 aa24.61■■□□□ 1.53
Trim11-203ENSMUST00000108810 Top2bQ64511 1612 aa24.56■■□□□ 1.52
Trim11-203ENSMUST00000108810 Iqgap2Q3UQ44 1575 aa24.55■■□□□ 1.52
Trim11-203ENSMUST00000108810 Atad2bE9Q166 1460 aaKnown RBP24.5■■□□□ 1.51
Trim11-203ENSMUST00000108810 Rsf1E9PWW9 1441 aaKnown RBP24.49■■□□□ 1.51
Trim11-203ENSMUST00000108810 Cngb1E1AZ71 1325 aa24.46■■□□□ 1.51
Trim11-203ENSMUST00000108810 Pds5bQ4VA53 1446 aaKnown RBP24.43■■□□□ 1.5
Trim11-203ENSMUST00000108810 Ccdc88bQ4QRL3 1481 aa24.4■■□□□ 1.5
Trim11-203ENSMUST00000108810 Chic1Q8CBW7 227 aa24.33■■□□□ 1.49
Trim11-203ENSMUST00000108810 Esf1Q3V1V3 845 aaKnown RBP24.31■■□□□ 1.48
Trim11-203ENSMUST00000108810 Cc2d2aQ8CFW7 1633 aa24.28■■□□□ 1.48
Trim11-203ENSMUST00000108810 Wdr62Q3U3T8 1523 aa24.14■■□□□ 1.46
Trim11-203ENSMUST00000108810 Fmn1Q05860 1466 aa24.12■■□□□ 1.45
Trim11-203ENSMUST00000108810 Frmpd1A2AKB4 1549 aa24.11■■□□□ 1.45
Trim11-203ENSMUST00000108810 Top2aQ01320 1528 aaKnown RBP23.98■■□□□ 1.43
Trim11-203ENSMUST00000108810 TnnQ80Z71 1560 aa23.97■■□□□ 1.43
Trim11-203ENSMUST00000108810 Ercc6F8VPZ5 1481 aa23.96■■□□□ 1.43
Trim11-203ENSMUST00000108810 Unc13aQ4KUS2 1712 aa23.94■■□□□ 1.42
Trim11-203ENSMUST00000108810 Gab3Q8BSM5 595 aa23.89■■□□□ 1.41
Trim11-203ENSMUST00000108810 Thoc2B1AZI6 1594 aaKnown RBP23.88■■□□□ 1.41
Trim11-203ENSMUST00000108810 Ehmt2Q9Z148 1263 aaKnown RBP23.83■■□□□ 1.4
Trim11-203ENSMUST00000108810 Lamc3Q9R0B6 1581 aa23.82■■□□□ 1.4
Trim11-203ENSMUST00000108810 Rapgef2Q8CHG7 1496 aa23.76■■□□□ 1.39
Trim11-203ENSMUST00000108810 Rpgrip1Q9EPQ2 1331 aa23.73■■□□□ 1.39
Trim11-203ENSMUST00000108810 Acin1Q9JIX8 1338 aaKnown RBP23.71■■□□□ 1.39
Trim11-203ENSMUST00000108810 Kif15Q6P9L6 1387 aa23.59■■□□□ 1.37
Trim11-203ENSMUST00000108810 Phldb1Q6PDH0 1371 aaKnown RBP23.57■■□□□ 1.36
Trim11-203ENSMUST00000108810 Fam135aQ6NS59 1506 aa23.57■■□□□ 1.36
Trim11-203ENSMUST00000108810 Eif4g1Q6NZJ6 1600 aaKnown RBP23.57■■□□□ 1.36
Trim11-203ENSMUST00000108810 Camsap1A2AHC3 1581 aa23.56■■□□□ 1.36
Trim11-203ENSMUST00000108810 Cep162Q6ZQ06 1403 aa23.53■■□□□ 1.36
Trim11-203ENSMUST00000108810 NrkQ9R0G8 1455 aa23.39■■□□□ 1.33
Trim11-203ENSMUST00000108810 PtprkP35822 1457 aa23.38■■□□□ 1.33
Trim11-203ENSMUST00000108810 Ccdc18Q640L5 1455 aa23.36■■□□□ 1.33
Trim11-203ENSMUST00000108810 Shroom4Q1W617 1475 aa23.33■■□□□ 1.33
Trim11-203ENSMUST00000108810 Grin2bQ01097 1482 aa23.33■■□□□ 1.32
Trim11-203ENSMUST00000108810 Cux2P70298 1426 aa23.31■■□□□ 1.32
Trim11-203ENSMUST00000108810 Arhgap35Q91YM2 1499 aa23.3■■□□□ 1.32
Trim11-203ENSMUST00000108810 Npm2Q80W85 207 aa23.26■■□□□ 1.31
Trim11-203ENSMUST00000108810 Ubl4bQ9CQ84 188 aa23.26■■□□□ 1.31
Trim11-203ENSMUST00000108810 Il27Q8K3I6 234 aa23.24■■□□□ 1.31
Trim11-203ENSMUST00000108810 Map3k1P53349 1493 aa23.19■■□□□ 1.3
Trim11-203ENSMUST00000108810 Baz1bQ9Z277 1479 aa23.17■■□□□ 1.3
Trim11-203ENSMUST00000108810 Myt1lP97500 1187 aa23.15■■□□□ 1.3
Trim11-203ENSMUST00000108810 LrpprcQ6PB66 1392 aaKnown RBP23.08■■□□□ 1.29
Trim11-203ENSMUST00000108810 Mroh2bQ7M6Y6 1581 aa23.08■■□□□ 1.29
Trim11-203ENSMUST00000108810 PogzQ8BZH4 1409 aaKnown RBP23.07■■□□□ 1.28
Trim11-203ENSMUST00000108810 Efcab5A0JP43 1406 aa23.04■■□□□ 1.28
Trim11-203ENSMUST00000108810 Npm1Q61937 292 aaKnown RBP23.04■■□□□ 1.28
Trim11-203ENSMUST00000108810 Duox2A2AQ99 1517 aa23.01■■□□□ 1.27
Trim11-203ENSMUST00000108810 AqrQ8CFQ3 1481 aaKnown RBP23■■□□□ 1.27
Trim11-203ENSMUST00000108810 Clip1Q922J3 1391 aa22.99■■□□□ 1.27
Trim11-203ENSMUST00000108810 Dnajc5bQ9CQ94 199 aa22.98■■□□□ 1.27
Trim11-203ENSMUST00000108810 Mrc2Q64449 1479 aa22.98■■□□□ 1.27
Trim11-203ENSMUST00000108810 Arap1Q4LDD4 1452 aa22.94■■□□□ 1.26
Trim11-203ENSMUST00000108810 Kif21aQ9QXL2 1672 aa22.94■■□□□ 1.26
Trim11-203ENSMUST00000108810 Samd9lQ69Z37 1561 aa22.93■■□□□ 1.26
Trim11-203ENSMUST00000108810 Eea1Q8BL66 1411 aa22.92■■□□□ 1.26
Trim11-203ENSMUST00000108810 Dhx29Q6PGC1 1365 aaKnown RBP22.91■■□□□ 1.26
Trim11-203ENSMUST00000108810 Erich3F6QRE9 1637 aa22.91■■□□□ 1.26
Trim11-203ENSMUST00000108810 Ankrd26Q811D2 1581 aa22.88■■□□□ 1.25
Trim11-203ENSMUST00000108810 Mier1Q5UAK0 511 aa22.88■■□□□ 1.25
Trim11-203ENSMUST00000108810 Arhgef5E9Q7D5 1581 aa22.86■■□□□ 1.25
Trim11-203ENSMUST00000108810 Crocc2F6XLV1 1638 aa22.86■■□□□ 1.25
Trim11-203ENSMUST00000108810 SynmQ70IV5 1561 aa22.84■■□□□ 1.25
Trim11-203ENSMUST00000108810 Carmil1Q6EDY6 1374 aa22.81■■□□□ 1.24
Trim11-203ENSMUST00000108810 Setd5Q5XJV7 1441 aa22.81■■□□□ 1.24
Trim11-203ENSMUST00000108810 Zeb1Q64318 1117 aa22.79■■□□□ 1.24
Trim11-203ENSMUST00000108810 UbtfP25976 765 aaKnown RBP22.77■■□□□ 1.24
Trim11-203ENSMUST00000108810 Cux1P53564 1515 aa22.76■■□□□ 1.23
Trim11-203ENSMUST00000108810 Lmo7E9PYF4 1699 aaKnown RBP22.75■■□□□ 1.23
Trim11-203ENSMUST00000108810 Plekhg3Q4VAC9 1341 aa22.73■■□□□ 1.23
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms