RNA–Protein interactions for RNA: ENSMUST00000108419.8

Vps53-203, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

TSL 1 (best) BASIC

Gene Vps53, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-203ENSMUST00000108419 Igkv4-78A0A0A6YYE5 119 aa12.15□□□□□ -0.46
Vps53-203ENSMUST00000108419 E130114P18RikF6S0S7 154 aa12.15□□□□□ -0.46
Vps53-203ENSMUST00000108419 Dand5Q76LW6 185 aa12.15□□□□□ -0.46
Vps53-203ENSMUST00000108419 Ss18l2Q9D174 77 aa12.14□□□□□ -0.47
Vps53-203ENSMUST00000108419 Znf740Q6NZQ6 180 aa12.14□□□□□ -0.47
Vps53-203ENSMUST00000108419 Trav3-4A0A075B654 114 aa12.13□□□□□ -0.47
Vps53-203ENSMUST00000108419 Apoc4Q61268 124 aa12.13□□□□□ -0.47
Vps53-203ENSMUST00000108419 TeppQ6IMH0 216 aa12.13□□□□□ -0.47
Vps53-203ENSMUST00000108419 Igkv4-91A0A075B5L2 119 aa12.13□□□□□ -0.47
Vps53-203ENSMUST00000108419 CirbpP60824 172 aaKnown RBP12.13□□□□□ -0.47
Vps53-203ENSMUST00000108419 Phpt1Q9DAK9 124 aa12.13□□□□□ -0.47
Vps53-203ENSMUST00000108419 Ly6hQ9WUC3 139 aa12.13□□□□□ -0.47
Vps53-203ENSMUST00000108419 Gm11020F6ZGD5 61 aa12.12□□□□□ -0.47
Vps53-203ENSMUST00000108419 Pla2g1bQ9Z0Y2 146 aa12.12□□□□□ -0.47
Vps53-203ENSMUST00000108419 Q8R092 253 aa12.11□□□□□ -0.47
Vps53-203ENSMUST00000108419 Spry2Q9QXV8 315 aa12.11□□□□□ -0.47
Vps53-203ENSMUST00000108419 Chchd7Q8K2Q5 85 aa12.11□□□□□ -0.47
Vps53-203ENSMUST00000108419 Notch1Q01705 2531 aa12.1□□□□□ -0.47
Vps53-203ENSMUST00000108419 P01823 113 aa12.1□□□□□ -0.47
Vps53-203ENSMUST00000108419 Sostdc1Q9CQN4 206 aa12.1□□□□□ -0.47
Vps53-203ENSMUST00000108419 Gm17472A0A075B683 117 aa12.09□□□□□ -0.47
Vps53-203ENSMUST00000108419 Gm7257D3YX25 99 aa12.09□□□□□ -0.47
Vps53-203ENSMUST00000108419 Dnah10D3YYQ8 4591 aa12.09□□□□□ -0.47
Vps53-203ENSMUST00000108419 RetnQ99P87 114 aa12.08□□□□□ -0.48
Vps53-203ENSMUST00000108419 Leap2Q91V13 76 aa12.07□□□□□ -0.48
Vps53-203ENSMUST00000108419 Trav14d-3-dv8A0A075B619 120 aa12.07□□□□□ -0.48
Vps53-203ENSMUST00000108419 D730001G18RikA0A087WQU7 115 aa12.07□□□□□ -0.48
Vps53-203ENSMUST00000108419 Cmc4Q61908 68 aa12.07□□□□□ -0.48
Vps53-203ENSMUST00000108419 Kmt2aP55200 3966 aa12.06□□□□□ -0.48
Vps53-203ENSMUST00000108419 Cops9Q3U898 57 aa12.06□□□□□ -0.48
Vps53-203ENSMUST00000108419 Gpha2Q925Q5 128 aa12.06□□□□□ -0.48
Vps53-203ENSMUST00000108419 4930546C10RikE9Q4Y3 121 aa12.05□□□□□ -0.48
Vps53-203ENSMUST00000108419 Phxr5P08399 672 aa12.05□□□□□ -0.48
Vps53-203ENSMUST00000108419 Defa1P11477 93 aa12.05□□□□□ -0.48
Vps53-203ENSMUST00000108419 Klk11Q9QYN3 276 aa12.05□□□□□ -0.48
Vps53-203ENSMUST00000108419 Dnah6E9Q0B6 4144 aa12.05□□□□□ -0.48
Vps53-203ENSMUST00000108419 Gm10577Q3UDV9 132 aa12.05□□□□□ -0.48
Vps53-203ENSMUST00000108419 Shisa2Q8QZV2 295 aa12.05□□□□□ -0.48
Vps53-203ENSMUST00000108419 Trav13n-1A0A0G2JEU8 110 aa12.04□□□□□ -0.48
Vps53-203ENSMUST00000108419 Gm10542F6XDR3 90 aa12.04□□□□□ -0.48
Vps53-203ENSMUST00000108419 Pglyrp4Q0VB07 374 aa12.04□□□□□ -0.48
Vps53-203ENSMUST00000108419 Ighv1-62-1A0A075B5U3 116 aa12.03□□□□□ -0.48
Vps53-203ENSMUST00000108419 Lst1O08843 95 aa12.03□□□□□ -0.48
Vps53-203ENSMUST00000108419 Trav9d-3A0A075B695 113 aa12.02□□□□□ -0.49
Vps53-203ENSMUST00000108419 SelenowP63300 88 aa12.02□□□□□ -0.49
Vps53-203ENSMUST00000108419 PemtQ61907 199 aa12.02□□□□□ -0.49
Vps53-203ENSMUST00000108419 Igkv4-79A0A075B5L8 119 aa12.01□□□□□ -0.49
Vps53-203ENSMUST00000108419 5730596B20RikQ8BQ08 205 aa12.01□□□□□ -0.49
Vps53-203ENSMUST00000108419 Prss58Q8BW11 241 aa12.01□□□□□ -0.49
Vps53-203ENSMUST00000108419 Trav11A0A0B4J1J9 114 aa12□□□□□ -0.49
Vps53-203ENSMUST00000108419 Igkv4-54A0A0G2JES9 117 aa12□□□□□ -0.49
Vps53-203ENSMUST00000108419 1700011M02RikB1AX35 88 aa12□□□□□ -0.49
Vps53-203ENSMUST00000108419 Defa16P50714 93 aa12□□□□□ -0.49
Vps53-203ENSMUST00000108419 Gm10549Q3URY4 149 aa12□□□□□ -0.49
Vps53-203ENSMUST00000108419 Atp5g1Q9CR84 136 aa12□□□□□ -0.49
Vps53-203ENSMUST00000108419 MalO09198 153 aa11.99□□□□□ -0.49
Vps53-203ENSMUST00000108419 ScxQ64124 207 aa11.99□□□□□ -0.49
Vps53-203ENSMUST00000108419 Tfpi2O35536 230 aa11.98□□□□□ -0.49
Vps53-203ENSMUST00000108419 Rpl36aP83882 106 aaKnown RBP11.98□□□□□ -0.49
Vps53-203ENSMUST00000108419 Defa25Q5G864 92 aa11.98□□□□□ -0.49
Vps53-203ENSMUST00000108419 Lage3Q9CR70 148 aa11.98□□□□□ -0.49
Vps53-203ENSMUST00000108419 6430550D23RikE9Q1X6 194 aa11.97□□□□□ -0.49
Vps53-203ENSMUST00000108419 Xcl1P47993 114 aa11.97□□□□□ -0.49
Vps53-203ENSMUST00000108419 Gm9513B3GLJ6 99 aa11.96□□□□□ -0.49
Vps53-203ENSMUST00000108419 Defa2P28309 93 aa11.96□□□□□ -0.49
Vps53-203ENSMUST00000108419 Vmo1Q5SXG7 201 aa11.96□□□□□ -0.49
Vps53-203ENSMUST00000108419 Rpl28P41105 137 aaKnown RBP11.96□□□□□ -0.49
Vps53-203ENSMUST00000108419 P01745 121 aa11.95□□□□□ -0.5
Vps53-203ENSMUST00000108419 Csdc2Q91YQ3 154 aa11.95□□□□□ -0.5
Vps53-203ENSMUST00000108419 Higd2aQ9CQJ1 106 aa11.95□□□□□ -0.5
Vps53-203ENSMUST00000108419 TnxbO35452 4006 aa11.95□□□□□ -0.5
Vps53-203ENSMUST00000108419 Cox7a1P56392 80 aa11.95□□□□□ -0.5
Vps53-203ENSMUST00000108419 Cdc42se2Q8BGH7 84 aa11.95□□□□□ -0.5
Vps53-203ENSMUST00000108419 9430069I07RikQ9CX21 111 aa11.94□□□□□ -0.5
Vps53-203ENSMUST00000108419 Igkv4-72A0A0B4J1I4 117 aa11.94□□□□□ -0.5
Vps53-203ENSMUST00000108419 Acyp1P56376 99 aa11.94□□□□□ -0.5
Vps53-203ENSMUST00000108419 Hist1h4aP62806 103 aaKnown RBP11.94□□□□□ -0.5
Vps53-203ENSMUST00000108419 Plac8l1Q08EJ0 177 aa11.94□□□□□ -0.5
Vps53-203ENSMUST00000108419 Tm2d2Q8R0I4 213 aa11.94□□□□□ -0.5
Vps53-203ENSMUST00000108419 4930524J08RikQ9CUJ5 163 aa11.94□□□□□ -0.5
Vps53-203ENSMUST00000108419 P01729 129 aa11.93□□□□□ -0.5
Vps53-203ENSMUST00000108419 Dad1P61804 113 aa11.93□□□□□ -0.5
Vps53-203ENSMUST00000108419 Ighv1-59A0A0A6YXE0 117 aa11.92□□□□□ -0.5
Vps53-203ENSMUST00000108419 Igf1P05017 153 aa11.92□□□□□ -0.5
Vps53-203ENSMUST00000108419 Spink1P09036 80 aa11.91□□□□□ -0.5
Vps53-203ENSMUST00000108419 4930519P11RikQ9CUJ8 166 aa11.91□□□□□ -0.5
Vps53-203ENSMUST00000108419 Dnah14A0A140LIJ4 4489 aa11.91□□□□□ -0.5
Vps53-203ENSMUST00000108419 Ppp1r32Q148A4 427 aa11.91□□□□□ -0.5
Vps53-203ENSMUST00000108419 Trav9d-4A0A0G2JG37 103 aa11.9□□□□□ -0.5
Vps53-203ENSMUST00000108419 Sh2d1aO88890 126 aa11.9□□□□□ -0.5
Vps53-203ENSMUST00000108419 Igkv4-61A0A0G2JH00 117 aa11.9□□□□□ -0.51
Vps53-203ENSMUST00000108419 CrygaP04345 174 aa11.89□□□□□ -0.51
Vps53-203ENSMUST00000108419 Ighv2-9-1A0A075B697 116 aa11.88□□□□□ -0.51
Vps53-203ENSMUST00000108419 Spink4O35679 86 aa11.88□□□□□ -0.51
Vps53-203ENSMUST00000108419 Klk9Q32M27 251 aa11.88□□□□□ -0.51
Vps53-203ENSMUST00000108419 Igkv1-117A0A140T8M0 119 aa11.88□□□□□ -0.51
Vps53-203ENSMUST00000108419 FcgbpE9Q0B5 2583 aa11.87□□□□□ -0.51
Vps53-203ENSMUST00000108419 Gm10647E9Q8X0 124 aa11.87□□□□□ -0.51
Vps53-203ENSMUST00000108419 Ighv1-49A0A0A6YWX2 117 aa11.87□□□□□ -0.51
Vps53-203ENSMUST00000108419 Gm10772F7AIG4 85 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 62.7 ms