RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 MalO09198 153 aa8.23□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Gm10735Q3US96 136 aa8.23□□□□□ -1.09
Col9a1-202ENSMUST00000088349 D130052B06RikQ3UW13 202 aa8.23□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Notch1Q01705 2531 aa8.23□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Srsf12Q8C8K3 266 aa8.23□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Trav11A0A0B4J1J9 114 aa8.23□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Prh1P05142 261 aa8.23□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Cox7a1P56392 80 aa8.23□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Plac8l1Q08EJ0 177 aa8.23□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Cdc42se2Q8BGH7 84 aa8.23□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Fxyd5P97808 178 aa8.22□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Hivep1Q03172 2688 aa8.22□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Ighv1-61P01749 117 aa8.21□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Ndufa12Q7TMF3 145 aaKnown RBP8.21□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Tomm7Q9D173 55 aa8.21□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Fbn1Q61554 2873 aaKnown RBP8.21□□□□□ -1.09
Col9a1-202ENSMUST00000088349 Gm8439G3UWA7 96 aa8.21□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Defa25Q5G864 92 aa8.21□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Cd164l2Q9D6W7 172 aa8.21□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Trav13d-4A0A0G2JFX3 110 aa8.21□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Tfpi2O35536 230 aa8.21□□□□□ -1.1
Col9a1-202ENSMUST00000088349 5730596B20RikQ8BQ08 205 aa8.21□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Spata25Q9DA57 226 aa8.2□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Stab1Q8R4Y4 2571 aa8.19□□□□□ -1.1
Col9a1-202ENSMUST00000088349 P01755 137 aa8.19□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Defb42Q8BVB5 75 aa8.19□□□□□ -1.1
Col9a1-202ENSMUST00000088349 CicQ924A2 2510 aa8.19□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Cops9Q3U898 57 aa8.18□□□□□ -1.1
Col9a1-202ENSMUST00000088349 SbsponQ3UPR9 264 aa8.18□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Igkv1-117A0A140T8M0 119 aa8.18□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Gm11565A2A4M7 156 aa8.18□□□□□ -1.1
Col9a1-202ENSMUST00000088349 PtprqP0C5E4 2300 aa8.18□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Lypd5Q9D7Z7 256 aa8.18□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Trav13-1A0A075B644 110 aa8.17□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Trav13n-2A0A0G2JF93 110 aa8.17□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Igkv6-13A0A0G2JGY3 119 aa8.17□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Apoc4Q61268 124 aa8.17□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Lage3Q9CR70 148 aa8.16□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Ppp1r32Q148A4 427 aa8.16□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Vmo1Q5SXG7 201 aa8.16□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Dand5Q76LW6 185 aa8.16□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Gm20726G3UX18 150 aa8.16□□□□□ -1.1
Col9a1-202ENSMUST00000088349 GfyJ3KML8 504 aa8.16□□□□□ -1.1
Col9a1-202ENSMUST00000088349 4930546C10RikE9Q4Y3 121 aa8.15□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Gm7102J3QQ10 178 aa8.15□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Gm10577Q3UDV9 132 aa8.15□□□□□ -1.1
Col9a1-202ENSMUST00000088349 4930524J08RikQ9CUJ5 163 aa8.15□□□□□ -1.1
Col9a1-202ENSMUST00000088349 Cox6b1P56391 86 aaKnown RBP8.15□□□□□ -1.11
Col9a1-202ENSMUST00000088349 CrygaP04345 174 aa8.14□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Igf1P05017 153 aa8.14□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Tenm1Q9WTS4 2731 aa8.14□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Ighv8-11A0A075B5X4 119 aa8.14□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Xcl1P47993 114 aa8.14□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Dnal4Q9DCM4 105 aa8.14□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Nsd1O88491 2588 aaKnown RBP8.13□□□□□ -1.11
Col9a1-202ENSMUST00000088349 9430069I07RikQ9CX21 111 aa8.13□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Hbb-b2P02089 147 aa8.13□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Csdc2Q91YQ3 154 aa8.13□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Rnf152Q8BG47 203 aa8.12□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Prss58Q8BW11 241 aa8.12□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Gm16381A0A1Y7VKT9 73 aa8.11□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Gm10772F7AIG4 85 aa8.11□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Rpl28P41105 137 aaKnown RBP8.11□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Gm10549Q3URY4 149 aa8.11□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Igkv1-99F6XWB2 120 aa8.1□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Gm3618D3Z4P5 127 aa8.1□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Defb50Q6TU36 73 aa8.1□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Tm2d2Q8R0I4 213 aa8.1□□□□□ -1.11
Col9a1-202ENSMUST00000088349 4930535I16RikQ9CUI2 172 aa8.1□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Gm2916Q9D9B9 127 aa8.1□□□□□ -1.11
Col9a1-202ENSMUST00000088349 ApcQ61315 2845 aa8.09□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Gm9767G3X930 207 aa8.09□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Leap2Q91V13 76 aa8.09□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Zfand2aQ9JII7 171 aa8.09□□□□□ -1.11
Col9a1-202ENSMUST00000088349 Ly6c2P0CW03 131 aa8.09□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Defa4P28311 92 aa8.09□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Defa7P50705 93 aa8.09□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Pla2g1bQ9Z0Y2 146 aa8.09□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Itpr2Q9Z329 2701 aa8.08□□□□□ -1.12
Col9a1-202ENSMUST00000088349 PolqQ8CGS6 2544 aa8.08□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Trav13-2A0A075B649 110 aa8.08□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Gpha2Q925Q5 128 aa8.08□□□□□ -1.12
Col9a1-202ENSMUST00000088349 MobpQ9D2P8 170 aa8.08□□□□□ -1.12
Col9a1-202ENSMUST00000088349 SmcpP15265 143 aa8.08□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Defa20Q45VN2 95 aa8.08□□□□□ -1.12
Col9a1-202ENSMUST00000088349 2010109I03RikQ9CQ11 111 aa8.08□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Col6a5A6H584 2640 aa8.07□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Cd99Q8VCN6 175 aa8.07□□□□□ -1.12
Col9a1-202ENSMUST00000088349 9530053A07RikE9PVG8 2581 aa8.07□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Igkv2-109A0A075B5K6 120 aa8.06□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Naa38Q9D2U5 125 aa8.06□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Zfp951A0A087WRH0 451 aa8.05□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Klk12B2RVZ0 247 aa8.05□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Hist1h4aP62806 103 aaKnown RBP8.05□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Rpl39lQ9CQD0 51 aa8.05□□□□□ -1.12
Col9a1-202ENSMUST00000088349 ScxQ64124 207 aa8.04□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Chchd7Q8K2Q5 85 aa8.04□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Acyp1P56376 99 aa8.04□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Defa21Q8C1P2 93 aa8.04□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Gm5142Q8C5X9 133 aa8.04□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms