RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Tm2d2Q8R0I4 213 aa8.55□□□□□ -1.04
Lig3-202ENSMUST00000080461 Zfp951A0A087WRH0 451 aa8.54□□□□□ -1.04
Lig3-202ENSMUST00000080461 B230359F08RikA0A0B4J1K3 109 aa8.54□□□□□ -1.04
Lig3-202ENSMUST00000080461 Dnah6E9Q0B6 4144 aa8.54□□□□□ -1.04
Lig3-202ENSMUST00000080461 Odf3l2Q3TZ65 277 aa8.53□□□□□ -1.04
Lig3-202ENSMUST00000080461 Eif4ebp3Q80VV3 101 aa8.53□□□□□ -1.04
Lig3-202ENSMUST00000080461 Ighv8-5A0A0A6YY60 119 aa8.52□□□□□ -1.04
Lig3-202ENSMUST00000080461 Ighv8-13A0A075B5Y0 101 aa8.52□□□□□ -1.05
Lig3-202ENSMUST00000080461 Try10Q792Z1 246 aaKnown RBP8.52□□□□□ -1.05
Lig3-202ENSMUST00000080461 Glrp1E9Q9S8 174 aa8.52□□□□□ -1.05
Lig3-202ENSMUST00000080461 P01755 137 aa8.52□□□□□ -1.05
Lig3-202ENSMUST00000080461 Sostdc1Q9CQN4 206 aa8.52□□□□□ -1.05
Lig3-202ENSMUST00000080461 Pfn2Q9JJV2 140 aa8.52□□□□□ -1.05
Lig3-202ENSMUST00000080461 Trav7-6A0A075B640 112 aa8.51□□□□□ -1.05
Lig3-202ENSMUST00000080461 Igkv6-13A0A0G2JGY3 119 aa8.51□□□□□ -1.05
Lig3-202ENSMUST00000080461 CirbpP60824 172 aaKnown RBP8.51□□□□□ -1.05
Lig3-202ENSMUST00000080461 TnxbO35452 4006 aa8.5□□□□□ -1.05
Lig3-202ENSMUST00000080461 2310009B15RikA0A0A6YWI4 143 aa8.5□□□□□ -1.05
Lig3-202ENSMUST00000080461 Ighv8-11A0A075B5X4 119 aa8.5□□□□□ -1.05
Lig3-202ENSMUST00000080461 Pxt1Q8K459 51 aa8.5□□□□□ -1.05
Lig3-202ENSMUST00000080461 Rpl13aP19253 203 aaKnown RBP8.49□□□□□ -1.05
Lig3-202ENSMUST00000080461 1700011M02RikB1AX35 88 aa8.49□□□□□ -1.05
Lig3-202ENSMUST00000080461 Prss58Q8BW11 241 aa8.49□□□□□ -1.05
Lig3-202ENSMUST00000080461 Dnah3Q8BW94 4083 aa8.49□□□□□ -1.05
Lig3-202ENSMUST00000080461 S100a8P27005 89 aa8.48□□□□□ -1.05
Lig3-202ENSMUST00000080461 Gm3618D3Z4P5 127 aa8.48□□□□□ -1.05
Lig3-202ENSMUST00000080461 Gm10135F6TEE5 83 aa8.48□□□□□ -1.05
Lig3-202ENSMUST00000080461 Gm9936Q8C864 160 aa8.48□□□□□ -1.05
Lig3-202ENSMUST00000080461 9430069I07RikQ9CX21 111 aa8.48□□□□□ -1.05
Lig3-202ENSMUST00000080461 Gm2916Q9D9B9 127 aa8.48□□□□□ -1.05
Lig3-202ENSMUST00000080461 4930442H23RikQ9D5G7 103 aa8.48□□□□□ -1.05
Lig3-202ENSMUST00000080461 Gm16181B0V2H2 73 aa8.47□□□□□ -1.05
Lig3-202ENSMUST00000080461 Tac4Q99N14 128 aa8.47□□□□□ -1.05
Lig3-202ENSMUST00000080461 Dnah14A0A140LIJ4 4489 aa8.46□□□□□ -1.05
Lig3-202ENSMUST00000080461 Gm29423A0A087WRM1 55 aa8.46□□□□□ -1.05
Lig3-202ENSMUST00000080461 Tmem223Q9CQE2 199 aaKnown RBP8.46□□□□□ -1.05
Lig3-202ENSMUST00000080461 Ly6hQ9WUC3 139 aa8.46□□□□□ -1.05
Lig3-202ENSMUST00000080461 Trav4-3A0A0B4J1K1 110 aa8.45□□□□□ -1.06
Lig3-202ENSMUST00000080461 Gm10647E9Q8X0 124 aa8.45□□□□□ -1.06
Lig3-202ENSMUST00000080461 2010109I03RikQ9CQ11 111 aa8.45□□□□□ -1.06
Lig3-202ENSMUST00000080461 Cryba4Q9JJV0 196 aa8.45□□□□□ -1.06
Lig3-202ENSMUST00000080461 B9d2Q3UK10 175 aa8.45□□□□□ -1.06
Lig3-202ENSMUST00000080461 Hrct1Q9D6B9 109 aa8.45□□□□□ -1.06
Lig3-202ENSMUST00000080461 Igkv3-9A0A140T8P4 119 aa8.45□□□□□ -1.06
Lig3-202ENSMUST00000080461 Sslp1Q3UN54 99 aa8.45□□□□□ -1.06
Lig3-202ENSMUST00000080461 Sprr1bQ62267 153 aa8.45□□□□□ -1.06
Lig3-202ENSMUST00000080461 Defb50Q6TU36 73 aa8.45□□□□□ -1.06
Lig3-202ENSMUST00000080461 Trav13-1A0A075B644 110 aa8.44□□□□□ -1.06
Lig3-202ENSMUST00000080461 Smr3aQ61900 147 aa8.44□□□□□ -1.06
Lig3-202ENSMUST00000080461 Ss18l2Q9D174 77 aa8.44□□□□□ -1.06
Lig3-202ENSMUST00000080461 Zfand2aQ9JII7 171 aa8.44□□□□□ -1.06
Lig3-202ENSMUST00000080461 Trav9n-4A0A075B631 113 aa8.44□□□□□ -1.06
Lig3-202ENSMUST00000080461 Igkv8-34A0A0G2JDU0 121 aa8.44□□□□□ -1.06
Lig3-202ENSMUST00000080461 Krtap11-1E9Q2E9 183 aa8.43□□□□□ -1.06
Lig3-202ENSMUST00000080461 Gtf2h5Q8K2X8 71 aa8.43□□□□□ -1.06
Lig3-202ENSMUST00000080461 BatfO35284 125 aa8.43□□□□□ -1.06
Lig3-202ENSMUST00000080461 1700010B08RikQ9DAI7 102 aa8.43□□□□□ -1.06
Lig3-202ENSMUST00000080461 Rpl32-psP17932 135 aa8.42□□□□□ -1.06
Lig3-202ENSMUST00000080461 Ighv13-2A0A0A6YWN3 119 aa8.42□□□□□ -1.06
Lig3-202ENSMUST00000080461 Trav13-2A0A075B649 110 aa8.41□□□□□ -1.06
Lig3-202ENSMUST00000080461 Defa2P28309 93 aa8.41□□□□□ -1.06
Lig3-202ENSMUST00000080461 Snhg11Q4G0K9 87 aa8.41□□□□□ -1.06
Lig3-202ENSMUST00000080461 AplnQ9R0R4 77 aa8.41□□□□□ -1.06
Lig3-202ENSMUST00000080461 Ighv2-9-1A0A075B697 116 aa8.4□□□□□ -1.06
Lig3-202ENSMUST00000080461 Lst1O08843 95 aa8.4□□□□□ -1.06
Lig3-202ENSMUST00000080461 Timm17bQ9Z0V7 172 aa8.4□□□□□ -1.06
Lig3-202ENSMUST00000080461 Gm9508A0A1W2P7W0 230 aa8.4□□□□□ -1.07
Lig3-202ENSMUST00000080461 Ighv1-61P01749 117 aa8.4□□□□□ -1.07
Lig3-202ENSMUST00000080461 Gm6793B2RXM2 351 aa8.39□□□□□ -1.07
Lig3-202ENSMUST00000080461 Cox11Q6P8I6 275 aa8.39□□□□□ -1.07
Lig3-202ENSMUST00000080461 SelenowP63300 88 aa8.39□□□□□ -1.07
Lig3-202ENSMUST00000080461 Gm4707V9GXN5 68 aa8.39□□□□□ -1.07
Lig3-202ENSMUST00000080461 Igkv3-1A0A075B5P1 119 aa8.38□□□□□ -1.07
Lig3-202ENSMUST00000080461 Defa20Q45VN2 95 aa8.38□□□□□ -1.07
Lig3-202ENSMUST00000080461 PemtQ61907 199 aa8.38□□□□□ -1.07
Lig3-202ENSMUST00000080461 Wfdc12Q9JHY3 85 aa8.38□□□□□ -1.07
Lig3-202ENSMUST00000080461 Trav4d-3A0A075B625 110 aa8.38□□□□□ -1.07
Lig3-202ENSMUST00000080461 Fam240bJ3QMB3 78 aa8.38□□□□□ -1.07
Lig3-202ENSMUST00000080461 Insl3O09107 122 aa8.38□□□□□ -1.07
Lig3-202ENSMUST00000080461 E130208F15RikQ3UPV3 143 aa8.38□□□□□ -1.07
Lig3-202ENSMUST00000080461 Phpt1Q9DAK9 124 aa8.38□□□□□ -1.07
Lig3-202ENSMUST00000080461 Pkd1l1Q8R526 2615 aa8.37□□□□□ -1.07
Lig3-202ENSMUST00000080461 AW011738F6S7Q2 159 aa8.37□□□□□ -1.07
Lig3-202ENSMUST00000080461 MifP34884 115 aaKnown RBP8.37□□□□□ -1.07
Lig3-202ENSMUST00000080461 Gm28269A0A087WSG3 125 aa8.37□□□□□ -1.07
Lig3-202ENSMUST00000080461 CenpwQ3URR0 86 aa8.37□□□□□ -1.07
Lig3-202ENSMUST00000080461 Defb29Q8BGW9 78 aa8.37□□□□□ -1.07
Lig3-202ENSMUST00000080461 EnhoQ8K1D8 76 aa8.37□□□□□ -1.07
Lig3-202ENSMUST00000080461 Igkv1-117A0A140T8M0 119 aa8.36□□□□□ -1.07
Lig3-202ENSMUST00000080461 Reg3bP35230 175 aa8.36□□□□□ -1.07
Lig3-202ENSMUST00000080461 Cks1bP61025 79 aa8.36□□□□□ -1.07
Lig3-202ENSMUST00000080461 SpinklQ8CEK3 90 aa8.36□□□□□ -1.07
Lig3-202ENSMUST00000080461 Ociad2Q9D8W7 154 aa8.36□□□□□ -1.07
Lig3-202ENSMUST00000080461 Q9DAQ5 155 aa8.36□□□□□ -1.07
Lig3-202ENSMUST00000080461 Gm12057A0A087WR21 115 aa8.36□□□□□ -1.07
Lig3-202ENSMUST00000080461 MalO09198 153 aa8.36□□□□□ -1.07
Lig3-202ENSMUST00000080461 Ndufa12Q7TMF3 145 aaKnown RBP8.36□□□□□ -1.07
Lig3-202ENSMUST00000080461 Cby1Q9D1C2 127 aa8.36□□□□□ -1.07
Lig3-202ENSMUST00000080461 A0A286YCN5 57 aa8.35□□□□□ -1.07
Lig3-202ENSMUST00000080461 C530025M09RikF6RGA8 229 aa8.35□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 62 ms