RNA–Protein interactions for RNA: ENSMUST00000063116.9

Msx1-201, Transcript of Homeobox protein MSX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msx1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1-201ENSMUST00000063116 Trav13-4-dv7A0A075B6C2 110 aa13.41□□□□□ -0.26
Msx1-201ENSMUST00000063116 CckP09240 115 aa13.41□□□□□ -0.26
Msx1-201ENSMUST00000063116 4930432M17RikQ3V0W9 174 aa13.41□□□□□ -0.26
Msx1-201ENSMUST00000063116 Cryba4Q9JJV0 196 aa13.41□□□□□ -0.26
Msx1-201ENSMUST00000063116 Gm3618D3Z4P5 127 aa13.39□□□□□ -0.27
Msx1-201ENSMUST00000063116 Ighv1-61P01749 117 aa13.39□□□□□ -0.27
Msx1-201ENSMUST00000063116 Gm2916Q9D9B9 127 aa13.39□□□□□ -0.27
Msx1-201ENSMUST00000063116 Igkv6-13A0A0G2JGY3 119 aa13.39□□□□□ -0.27
Msx1-201ENSMUST00000063116 Sslp1Q3UN54 99 aa13.39□□□□□ -0.27
Msx1-201ENSMUST00000063116 Trav7-6A0A075B640 112 aa13.38□□□□□ -0.27
Msx1-201ENSMUST00000063116 Spink13Q3UTS8 97 aa13.38□□□□□ -0.27
Msx1-201ENSMUST00000063116 Snhg11Q4G0K9 87 aa13.38□□□□□ -0.27
Msx1-201ENSMUST00000063116 Igkv3-9A0A140T8P4 119 aa13.37□□□□□ -0.27
Msx1-201ENSMUST00000063116 Ss18l2Q9D174 77 aa13.37□□□□□ -0.27
Msx1-201ENSMUST00000063116 Rab37Q9JKM7 223 aa13.37□□□□□ -0.27
Msx1-201ENSMUST00000063116 AplnQ9R0R4 77 aa13.37□□□□□ -0.27
Msx1-201ENSMUST00000063116 Trav13d-4A0A0G2JFX3 110 aa13.37□□□□□ -0.27
Msx1-201ENSMUST00000063116 Defa3P28310 93 aa13.37□□□□□ -0.27
Msx1-201ENSMUST00000063116 Defa10P50708 93 aa13.37□□□□□ -0.27
Msx1-201ENSMUST00000063116 Defa15P50713 93 aa13.37□□□□□ -0.27
Msx1-201ENSMUST00000063116 1700010B08RikQ9DAI7 102 aa13.37□□□□□ -0.27
Msx1-201ENSMUST00000063116 Igkv8-34A0A0G2JDU0 121 aa13.36□□□□□ -0.27
Msx1-201ENSMUST00000063116 Prh1P05142 261 aa13.36□□□□□ -0.27
Msx1-201ENSMUST00000063116 Tmem223Q9CQE2 199 aaKnown RBP13.36□□□□□ -0.27
Msx1-201ENSMUST00000063116 Sprr1bQ62267 153 aa13.35□□□□□ -0.27
Msx1-201ENSMUST00000063116 Trav11A0A0B4J1J9 114 aa13.35□□□□□ -0.27
Msx1-201ENSMUST00000063116 Slamf6Q9ET39 351 aa13.35□□□□□ -0.27
Msx1-201ENSMUST00000063116 Gm26920S4R2A5 56 aa13.35□□□□□ -0.27
Msx1-201ENSMUST00000063116 Glrp1E9Q9S8 174 aa13.34□□□□□ -0.27
Msx1-201ENSMUST00000063116 Zfand2aQ9JII7 171 aa13.34□□□□□ -0.27
Msx1-201ENSMUST00000063116 Gm17349F7BGH6 99 aa13.33□□□□□ -0.28
Msx1-201ENSMUST00000063116 FcgbpE9Q0B5 2583 aa13.32□□□□□ -0.28
Msx1-201ENSMUST00000063116 Rpl13aP19253 203 aaKnown RBP13.32□□□□□ -0.28
Msx1-201ENSMUST00000063116 Trav13-1A0A075B644 110 aa13.31□□□□□ -0.28
Msx1-201ENSMUST00000063116 Pxt1Q8K459 51 aa13.31□□□□□ -0.28
Msx1-201ENSMUST00000063116 Gm45213A0A0U1RNZ6 101 aa13.31□□□□□ -0.28
Msx1-201ENSMUST00000063116 Krtap11-1E9Q2E9 183 aa13.31□□□□□ -0.28
Msx1-201ENSMUST00000063116 NrepQ07475 68 aa13.31□□□□□ -0.28
Msx1-201ENSMUST00000063116 Cops9Q3U898 57 aa13.31□□□□□ -0.28
Msx1-201ENSMUST00000063116 4930415O20RikQ8CDT5 131 aa13.31□□□□□ -0.28
Msx1-201ENSMUST00000063116 Hint1P70349 126 aaKnown RBP13.3□□□□□ -0.28
Msx1-201ENSMUST00000063116 Rpl32-psP17932 135 aa13.29□□□□□ -0.28
Msx1-201ENSMUST00000063116 Defb50Q6TU36 73 aa13.29□□□□□ -0.28
Msx1-201ENSMUST00000063116 E130208F15RikQ3UPV3 143 aa13.29□□□□□ -0.28
Msx1-201ENSMUST00000063116 EnhoQ8K1D8 76 aa13.29□□□□□ -0.28
Msx1-201ENSMUST00000063116 Dnah1E9Q8T7 4250 aa13.28□□□□□ -0.28
Msx1-201ENSMUST00000063116 Gm4707V9GXN5 68 aa13.28□□□□□ -0.28
Msx1-201ENSMUST00000063116 Trav9n-4A0A075B631 113 aa13.27□□□□□ -0.29
Msx1-201ENSMUST00000063116 Gm11020F6ZGD5 61 aa13.26□□□□□ -0.29
Msx1-201ENSMUST00000063116 PemtQ61907 199 aa13.26□□□□□ -0.29
Msx1-201ENSMUST00000063116 Defa2P28309 93 aa13.25□□□□□ -0.29
Msx1-201ENSMUST00000063116 Zc2hc1bQ9D534 172 aa13.25□□□□□ -0.29
Msx1-201ENSMUST00000063116 Igkv3-1A0A075B5P1 119 aa13.25□□□□□ -0.29
Msx1-201ENSMUST00000063116 Ighv2-9-1A0A075B697 116 aa13.25□□□□□ -0.29
Msx1-201ENSMUST00000063116 Trav9d-4A0A0G2JG37 103 aa13.25□□□□□ -0.29
Msx1-201ENSMUST00000063116 Gm10577Q3UDV9 132 aa13.25□□□□□ -0.29
Msx1-201ENSMUST00000063116 Gm4861Q8C5A4 106 aa13.25□□□□□ -0.29
Msx1-201ENSMUST00000063116 1700011M02RikB1AX35 88 aa13.24□□□□□ -0.29
Msx1-201ENSMUST00000063116 Try10Q792Z1 246 aaKnown RBP13.24□□□□□ -0.29
Msx1-201ENSMUST00000063116 Csmd3Q80T79 3707 aa13.24□□□□□ -0.29
Msx1-201ENSMUST00000063116 Reg3bP35230 175 aa13.23□□□□□ -0.29
Msx1-201ENSMUST00000063116 Sostdc1Q9CQN4 206 aa13.23□□□□□ -0.29
Msx1-201ENSMUST00000063116 Huwe1Q7TMY8 4377 aaKnown RBP13.23□□□□□ -0.29
Msx1-201ENSMUST00000063116 Dnah7bL7N1Y0 4068 aa13.23□□□□□ -0.29
Msx1-201ENSMUST00000063116 Gm12057A0A087WR21 115 aa13.23□□□□□ -0.29
Msx1-201ENSMUST00000063116 Gm9508A0A1W2P7W0 230 aa13.23□□□□□ -0.29
Msx1-201ENSMUST00000063116 4930544G11RikQ9CR99 193 aa13.23□□□□□ -0.29
Msx1-201ENSMUST00000063116 Gm11213A0A1B0GR83 88 aa13.22□□□□□ -0.29
Msx1-201ENSMUST00000063116 Gm10647E9Q8X0 124 aa13.21□□□□□ -0.29
Msx1-201ENSMUST00000063116 P01755 137 aa13.21□□□□□ -0.29
Msx1-201ENSMUST00000063116 2010109I03RikQ9CQ11 111 aa13.21□□□□□ -0.29
Msx1-201ENSMUST00000063116 Defb47Q30KN1 79 aa13.2□□□□□ -0.3
Msx1-201ENSMUST00000063116 Cox11Q6P8I6 275 aa13.2□□□□□ -0.3
Msx1-201ENSMUST00000063116 Bles03Q8VD62 251 aa13.2□□□□□ -0.3
Msx1-201ENSMUST00000063116 Prss58Q8BW11 241 aa13.19□□□□□ -0.3
Msx1-201ENSMUST00000063116 SpinklQ8CEK3 90 aa13.19□□□□□ -0.3
Msx1-201ENSMUST00000063116 Dync2h1Q45VK7 4306 aa13.18□□□□□ -0.3
Msx1-201ENSMUST00000063116 Gtf2h5Q8K2X8 71 aa13.18□□□□□ -0.3
Msx1-201ENSMUST00000063116 Pkd1l1Q8R526 2615 aa13.18□□□□□ -0.3
Msx1-201ENSMUST00000063116 AW011738F6S7Q2 159 aa13.17□□□□□ -0.3
Msx1-201ENSMUST00000063116 Lst1O08843 95 aa13.17□□□□□ -0.3
Msx1-201ENSMUST00000063116 Lage3Q9CR70 148 aa13.17□□□□□ -0.3
Msx1-201ENSMUST00000063116 Mzt1Q8BUR9 78 aa13.16□□□□□ -0.3
Msx1-201ENSMUST00000063116 Ighv13-2A0A0A6YWN3 119 aa13.15□□□□□ -0.3
Msx1-201ENSMUST00000063116 B230359F08RikA0A0B4J1K3 109 aa13.15□□□□□ -0.3
Msx1-201ENSMUST00000063116 Ly6hQ9WUC3 139 aa13.15□□□□□ -0.3
Msx1-201ENSMUST00000063116 Megf8P60882 2789 aa13.13□□□□□ -0.31
Msx1-201ENSMUST00000063116 MalO09198 153 aa13.13□□□□□ -0.31
Msx1-201ENSMUST00000063116 Cks1bP61025 79 aa13.13□□□□□ -0.31
Msx1-201ENSMUST00000063116 Muc6Q80T03 2850 aa13.13□□□□□ -0.31
Msx1-201ENSMUST00000063116 1810062G17RikG3X8Y2 129 aa13.13□□□□□ -0.31
Msx1-201ENSMUST00000063116 Tmem86bQ497J1 226 aa13.13□□□□□ -0.31
Msx1-201ENSMUST00000063116 Eif4ebp3Q80VV3 101 aa13.13□□□□□ -0.31
Msx1-201ENSMUST00000063116 Gm29423A0A087WRM1 55 aa13.12□□□□□ -0.31
Msx1-201ENSMUST00000063116 Ighv1-56A0A0A6YXG2 117 aa13.12□□□□□ -0.31
Msx1-201ENSMUST00000063116 C530025M09RikF6RGA8 229 aa13.12□□□□□ -0.31
Msx1-201ENSMUST00000063116 Pfn2Q9JJV2 140 aa13.12□□□□□ -0.31
Msx1-201ENSMUST00000063116 Gm10135F6TEE5 83 aa13.11□□□□□ -0.31
Msx1-201ENSMUST00000063116 CenpwQ3URR0 86 aa13.11□□□□□ -0.31
Msx1-201ENSMUST00000063116 Phpt1Q9DAK9 124 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms