RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Gm7849D3YX03 116 aa5.12□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Gm10542F6XDR3 90 aa5.12□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Krtap24-1G3X9A2 248 aa5.12□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Rpl35aO55142 110 aa5.12□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Igkv4-68A0A0B4J1I7 117 aa5.12□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Defa16P50714 93 aa5.12□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Trav9n-2A0A0G2JDP3 113 aa5.11□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Ccdc179J3QM76 67 aa5.11□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Phpt1Q9DAK9 124 aa5.11□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Gm17472A0A075B683 117 aa5.11□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Defa2P28309 93 aa5.11□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Gm10322F7D7I4 111 aa5.1□□□□□ -1.59
Clrn1-202ENSMUST00000055636 P01786 117 aa5.1□□□□□ -1.59
Clrn1-202ENSMUST00000055636 1700010B08RikQ9DAI7 102 aa5.1□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Crlf1Q9JM58 425 aa5.1□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Gm37389A0A0A6YW05 95 aa5.1□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Ly6c2P0CW03 131 aa5.1□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Sec61gP60060 68 aa5.1□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Q8R092 253 aa5.1□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Znf414Q9DCK4 299 aa5.1□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Notch1Q01705 2531 aa5.09□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Srrm2Q8BTI8 2703 aaKnown RBP5.09□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Gm19935A0A1B0GSF9 52 aa5.09□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Ntn5Q3UQ22 452 aa5.09□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Tmem86bQ497J1 226 aa5.09□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Fn1P11276 2477 aaKnown RBP5.09□□□□□ -1.59
Clrn1-202ENSMUST00000055636 Gm7257D3YX25 99 aa5.09□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Fgfbp3Q1HCM0 245 aa5.09□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Gm815Q3UWS2 115 aa5.09□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Pou2af1Q64693 256 aa5.09□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Igkv4-79A0A075B5L8 119 aa5.08□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Defa25Q5G864 92 aa5.08□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Lypd5Q9D7Z7 256 aa5.08□□□□□ -1.6
Clrn1-202ENSMUST00000055636 1700011M02RikB1AX35 88 aa5.08□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Ighv1-61P01749 117 aa5.08□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Prp2P05143 317 aa5.08□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Cox17P56394 63 aa5.08□□□□□ -1.6
Clrn1-202ENSMUST00000055636 CirbpP60824 172 aaKnown RBP5.08□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Ighv1-62-1A0A075B5U3 116 aa5.07□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Lst1O08843 95 aa5.07□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Cox6b1P56391 86 aaKnown RBP5.07□□□□□ -1.6
Clrn1-202ENSMUST00000055636 P01729 129 aa5.07□□□□□ -1.6
Clrn1-202ENSMUST00000055636 P01738 130 aa5.07□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Tmem258P61166 79 aa5.07□□□□□ -1.6
Clrn1-202ENSMUST00000055636 SelenowP63300 88 aa5.07□□□□□ -1.6
Clrn1-202ENSMUST00000055636 PemtQ61907 199 aa5.07□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Prss58Q8BW11 241 aa5.07□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Gm7138L7N2C3 230 aa5.06□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Gm3238W4VSP7 230 aa5.06□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Tfpi2O35536 230 aa5.06□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Igf1P05017 153 aa5.06□□□□□ -1.6
Clrn1-202ENSMUST00000055636 D130052B06RikQ3UW13 202 aa5.06□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Vmo1Q5SXG7 201 aa5.06□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Trav11A0A0B4J1J9 114 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Trav9d-4A0A0G2JG37 103 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Gm20726G3UX18 150 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Spink1P09036 80 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Fxyd5P97808 178 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 VwfQ8CIZ8 2813 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Igkv1-35A0A0G2JDE5 120 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 4930546C10RikE9Q4Y3 121 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Sh2d1aO88890 126 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 ApcQ61315 2845 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Gm10647E9Q8X0 124 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 P01745 121 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 CrygaP04345 174 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Nop10Q9CQS2 64 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 4930519P11RikQ9CUJ8 166 aa5.05□□□□□ -1.6
Clrn1-202ENSMUST00000055636 7530416G11RikJ3QJX6 159 aa5.04□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Gm7137J3QMW1 236 aa5.04□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Dand5Q76LW6 185 aa5.04□□□□□ -1.6
Clrn1-202ENSMUST00000055636 4930544G11RikQ9CR99 193 aa5.04□□□□□ -1.6
Clrn1-202ENSMUST00000055636 4930524J08RikQ9CUJ5 163 aa5.04□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Igkv1-117A0A140T8M0 119 aa5.04□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Plac8l1Q08EJ0 177 aa5.04□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Defb42Q8BVB5 75 aa5.04□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Cystm1Q8K353 104 aa5.04□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Krtap16-1A2A5X5 502 aa5.03□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Gm10577Q3UDV9 132 aa5.03□□□□□ -1.6
Clrn1-202ENSMUST00000055636 PtprqP0C5E4 2300 aa5.03□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Trav13-4-dv7A0A075B6C2 110 aa5.03□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Hist1h4aP62806 103 aaKnown RBP5.03□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Defb29Q8BGW9 78 aa5.03□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Fam19a5Q91WE9 132 aa5.03□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Gm10549Q3URY4 149 aa5.03□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Cdc42se2Q8BGH7 84 aa5.03□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Tm2d2Q8R0I4 213 aa5.03□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Pfn2Q9JJV2 140 aa5.03□□□□□ -1.6
Clrn1-202ENSMUST00000055636 Ighv8-11A0A075B5X4 119 aa5.02□□□□□ -1.61
Clrn1-202ENSMUST00000055636 Lamtor3O88653 124 aa5.02□□□□□ -1.61
Clrn1-202ENSMUST00000055636 Defa4P28311 92 aa5.02□□□□□ -1.61
Clrn1-202ENSMUST00000055636 Rpl28P41105 137 aaKnown RBP5.02□□□□□ -1.61
Clrn1-202ENSMUST00000055636 Xcl1P47993 114 aa5.02□□□□□ -1.61
Clrn1-202ENSMUST00000055636 4930518I15RikQ3V2W7 57 aa5.02□□□□□ -1.61
Clrn1-202ENSMUST00000055636 Klk11Q9QYN3 276 aa5.02□□□□□ -1.61
Clrn1-202ENSMUST00000055636 Gm36176A0A1W2P8D5 158 aa5.01□□□□□ -1.61
Clrn1-202ENSMUST00000055636 Ndufa12Q7TMF3 145 aaKnown RBP5.01□□□□□ -1.61
Clrn1-202ENSMUST00000055636 Igkv6-13A0A0G2JGY3 119 aa5.01□□□□□ -1.61
Clrn1-202ENSMUST00000055636 9230102O04RikA2ASX7 82 aa5.01□□□□□ -1.61
Clrn1-202ENSMUST00000055636 Gm10197F6QEY5 67 aa5.01□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 71.5 ms