RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Eif4ebp1Q60876 117 aa15.92■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Spink4O35679 86 aa15.91■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Sh2d1aO88890 126 aa15.91■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Defb47Q30KN1 79 aa15.91■□□□□ 0.14
Upf3a-201ENSMUST00000043767 1700020N15RikL7MTX3 112 aa15.91■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Rbmy1bQ60990 380 aa15.9■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Q9DAQ5 155 aa15.9■□□□□ 0.14
Upf3a-201ENSMUST00000043767 P01729 129 aa15.9■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Prelid3aQ8VE85 172 aa15.9■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Gm10772F7AIG4 85 aa15.87■□□□□ 0.13
Upf3a-201ENSMUST00000043767 1810062G17RikG3X8Y2 129 aa15.87■□□□□ 0.13
Upf3a-201ENSMUST00000043767 Sslp1Q3UN54 99 aa15.87■□□□□ 0.13
Upf3a-201ENSMUST00000043767 Gm9747Q810H1 104 aa15.87■□□□□ 0.13
Upf3a-201ENSMUST00000043767 PrcdQ00LT2 53 aa15.87■□□□□ 0.13
Upf3a-201ENSMUST00000043767 Ighv1-49A0A0A6YWX2 117 aa15.86■□□□□ 0.13
Upf3a-201ENSMUST00000043767 Gm17349F7BGH6 99 aa15.86■□□□□ 0.13
Upf3a-201ENSMUST00000043767 Rmi2Q3UPE3 149 aa15.85■□□□□ 0.13
Upf3a-201ENSMUST00000043767 CenpwQ3URR0 86 aa15.85■□□□□ 0.13
Upf3a-201ENSMUST00000043767 Trav13n-1A0A0G2JEU8 110 aa15.84■□□□□ 0.13
Upf3a-201ENSMUST00000043767 Gm11444F6QMA6 170 aa15.84■□□□□ 0.13
Upf3a-201ENSMUST00000043767 Gm4707V9GXN5 68 aa15.83■□□□□ 0.13
Upf3a-201ENSMUST00000043767 Glrp1E9Q9S8 174 aa15.83■□□□□ 0.12
Upf3a-201ENSMUST00000043767 Ighv1-61P01749 117 aa15.82■□□□□ 0.12
Upf3a-201ENSMUST00000043767 Ube2wQ8VDW4 151 aa15.82■□□□□ 0.12
Upf3a-201ENSMUST00000043767 Igkv4-53A0A0G2JFC6 119 aa15.82■□□□□ 0.12
Upf3a-201ENSMUST00000043767 CrygaP04345 174 aa15.81■□□□□ 0.12
Upf3a-201ENSMUST00000043767 Vmo1Q5SXG7 201 aa15.81■□□□□ 0.12
Upf3a-201ENSMUST00000043767 Cox6cQ9CPQ1 76 aa15.8■□□□□ 0.12
Upf3a-201ENSMUST00000043767 Gm29423A0A087WRM1 55 aa15.79■□□□□ 0.12
Upf3a-201ENSMUST00000043767 Zc2hc1bQ9D534 172 aa15.79■□□□□ 0.12
Upf3a-201ENSMUST00000043767 Gm20730A0A075B5J6 119 aa15.79■□□□□ 0.12
Upf3a-201ENSMUST00000043767 4930415O20RikQ8CDT5 131 aa15.79■□□□□ 0.12
Upf3a-201ENSMUST00000043767 Fgf23Q9EPC2 251 aa15.79■□□□□ 0.12
Upf3a-201ENSMUST00000043767 Gm43218A0A0G2JGT0 114 aa15.78■□□□□ 0.12
Upf3a-201ENSMUST00000043767 Plac8l1Q08EJ0 177 aa15.78■□□□□ 0.12
Upf3a-201ENSMUST00000043767 1700010B08RikQ9DAI7 102 aa15.78■□□□□ 0.12
Upf3a-201ENSMUST00000043767 2310009B15RikA0A0A6YWI4 143 aa15.77■□□□□ 0.12
Upf3a-201ENSMUST00000043767 Megf8P60882 2789 aa15.77■□□□□ 0.12
Upf3a-201ENSMUST00000043767 Trbv13-2A0A140T8N6 113 aa15.77■□□□□ 0.11
Upf3a-201ENSMUST00000043767 CirbpP60824 172 aaKnown RBP15.75■□□□□ 0.11
Upf3a-201ENSMUST00000043767 Lyrm7Q9DA03 104 aa15.75■□□□□ 0.11
Upf3a-201ENSMUST00000043767 Csmd3Q80T79 3707 aa15.74■□□□□ 0.11
Upf3a-201ENSMUST00000043767 Atp5eP56382 52 aa15.74■□□□□ 0.11
Upf3a-201ENSMUST00000043767 4930432M17RikQ3V0W9 174 aa15.74■□□□□ 0.11
Upf3a-201ENSMUST00000043767 Pkd1l1Q8R526 2615 aa15.74■□□□□ 0.11
Upf3a-201ENSMUST00000043767 Tomm7Q9D173 55 aa15.74■□□□□ 0.11
Upf3a-201ENSMUST00000043767 Gm16181B0V2H2 73 aa15.72■□□□□ 0.11
Upf3a-201ENSMUST00000043767 Cops9Q3U898 57 aa15.72■□□□□ 0.11
Upf3a-201ENSMUST00000043767 Shisa2Q8QZV2 295 aa15.72■□□□□ 0.11
Upf3a-201ENSMUST00000043767 Ighv8-11A0A075B5X4 119 aa15.71■□□□□ 0.11
Upf3a-201ENSMUST00000043767 Dnah17Q69Z23 4481 aa15.71■□□□□ 0.11
Upf3a-201ENSMUST00000043767 Muc6Q80T03 2850 aa15.71■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Defb11Q8R2I7 77 aa15.71■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Prr13Q9CQJ5 137 aa15.71■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Igkv4-79A0A075B5L8 119 aa15.7■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Trav7-6A0A075B640 112 aa15.7■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Wdr38Q9D994 303 aa15.7■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Cdc42se2Q8BGH7 84 aa15.69■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Ighv8-13A0A075B5Y0 101 aa15.69■□□□□ 0.1
Upf3a-201ENSMUST00000043767 P01823 113 aa15.69■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Huwe1Q7TMY8 4377 aaKnown RBP15.68■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Gm9508A0A1W2P7W0 230 aa15.68■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Gm10767Q3TQP0 103 aa15.68■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Prp2P05143 317 aa15.67■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Dnah7bL7N1Y0 4068 aa15.66■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Eif4ebp3Q80VV3 101 aa15.66■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Tm2d2Q8R0I4 213 aa15.65■□□□□ 0.1
Upf3a-201ENSMUST00000043767 Igkv8-34A0A0G2JDU0 121 aa15.64■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Ighv1-62-1A0A075B5U3 116 aa15.64■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Gm10577Q3UDV9 132 aa15.64■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Phpt1Q9DAK9 124 aa15.64■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Xlr5cQ9JJR2 179 aa15.64■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Gm10542F6XDR3 90 aa15.63■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Igkv1-99F6XWB2 120 aa15.63■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Trav13-1A0A075B644 110 aa15.62■□□□□ 0.09
Upf3a-201ENSMUST00000043767 4930546C10RikE9Q4Y3 121 aa15.62■□□□□ 0.09
Upf3a-201ENSMUST00000043767 AplnQ9R0R4 77 aa15.62■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Tfpi2O35536 230 aa15.61■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Odf3l2Q3TZ65 277 aa15.61■□□□□ 0.09
Upf3a-201ENSMUST00000043767 SpinklQ8CEK3 90 aa15.61■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Sostdc1Q9CQN4 206 aa15.61■□□□□ 0.09
Upf3a-201ENSMUST00000043767 9430069I07RikQ9CX21 111 aa15.61■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Ly6hQ9WUC3 139 aa15.61■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Znf414Q9DCK4 299 aa15.6■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Gm11020F6ZGD5 61 aa15.59■□□□□ 0.09
Upf3a-201ENSMUST00000043767 MobpQ9D2P8 170 aa15.59■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Dnah1E9Q8T7 4250 aa15.59■□□□□ 0.09
Upf3a-201ENSMUST00000043767 Gm10647E9Q8X0 124 aa15.58■□□□□ 0.08
Upf3a-201ENSMUST00000043767 RetnQ99P87 114 aa15.58■□□□□ 0.08
Upf3a-201ENSMUST00000043767 Snhg11Q4G0K9 87 aa15.57■□□□□ 0.08
Upf3a-201ENSMUST00000043767 Zfp951A0A087WRH0 451 aa15.56■□□□□ 0.08
Upf3a-201ENSMUST00000043767 Gm10251J3QPM5 127 aa15.56■□□□□ 0.08
Upf3a-201ENSMUST00000043767 SvipQ3UZP4 77 aa15.56■□□□□ 0.08
Upf3a-201ENSMUST00000043767 Lst1O08843 95 aa15.55■□□□□ 0.08
Upf3a-201ENSMUST00000043767 Prh1P05142 261 aa15.55■□□□□ 0.08
Upf3a-201ENSMUST00000043767 Gm4861Q8C5A4 106 aa15.55■□□□□ 0.08
Upf3a-201ENSMUST00000043767 Lage3Q9CR70 148 aa15.55■□□□□ 0.08
Upf3a-201ENSMUST00000043767 Tenm2Q9WTS5 2764 aa15.55■□□□□ 0.08
Upf3a-201ENSMUST00000043767 Gm10549Q3URY4 149 aa15.54■□□□□ 0.08
Upf3a-201ENSMUST00000043767 Psors1c2Q80ZC9 134 aa15.54■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms