RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 NischQ80TM9 1593 aa48,17■■■■■ 5,3
Upf3a-201ENSMUST00000043767 Gm35339A0A140LHH9 1649 aa48,09■■■■■ 5,29
Upf3a-201ENSMUST00000043767 Abcc9P70170 1546 aa46,7■■■■■ 5,07
Upf3a-201ENSMUST00000043767 Abcc8B2RUS7 1588 aa46,19■■■■■ 4,98
Upf3a-201ENSMUST00000043767 ScribQ80U72 1612 aa43,85■■■■■ 4,61
Upf3a-201ENSMUST00000043767 Rhox8Q6VSS7 320 aa43,04■■■■■ 4,48
Upf3a-201ENSMUST00000043767 Dcaf1Q80TR8 1506 aa42,74■■■■■ 4,43
Upf3a-201ENSMUST00000043767 Kdm5dQ62240 1548 aa42,69■■■■■ 4,42
Upf3a-201ENSMUST00000043767 NacadQ5SWP3 1504 aa42,53■■■■■ 4,4
Upf3a-201ENSMUST00000043767 Rb1cc1Q9ESK9 1588 aa42,09■■■■■ 4,33
Upf3a-201ENSMUST00000043767 Sycp2Q9CUU3 1500 aa41,67■■■■■ 4,26
Upf3a-201ENSMUST00000043767 Baz1aO88379 1555 aa41,54■■■■■ 4,24
Upf3a-201ENSMUST00000043767 Ccdc180J3QNE4 1664 aa41,48■■■■■ 4,23
Upf3a-201ENSMUST00000043767 Crybg2B7ZCC2 1516 aa41,06■■■■■ 4,16
Upf3a-201ENSMUST00000043767 BicraF8VPZ9 1578 aa40,96■■■■■ 4,15
Upf3a-201ENSMUST00000043767 Rtl1Q7M732 1744 aa40,9■■■■■ 4,14
Upf3a-201ENSMUST00000043767 Zcchc6Q5BLK4 1491 aaKnown RBP40,84■■■■■ 4,13
Upf3a-201ENSMUST00000043767 Smarca2Q6DIC0 1577 aa40,47■■■■■ 4,07
Upf3a-201ENSMUST00000043767 Ccdc136Q3TVA9 1136 aa40,13■■■■■ 4,01
Upf3a-201ENSMUST00000043767 Cecr2E9Q2Z1 1453 aa39,97■■■■□ 3,99
Upf3a-201ENSMUST00000043767 Smarca4Q3TKT4 1613 aaKnown RBP39,52■■■■□ 3,92
Upf3a-201ENSMUST00000043767 Pds5bQ4VA53 1446 aaKnown RBP39,42■■■■□ 3,9
Upf3a-201ENSMUST00000043767 Brd4Q9ESU6 1400 aaKnown RBP39,39■■■■□ 3,9
Upf3a-201ENSMUST00000043767 Trim41Q5NCC3 630 aa39,35■■■■□ 3,89
Upf3a-201ENSMUST00000043767 Atad2bE9Q166 1460 aaKnown RBP39,34■■■■□ 3,89
Upf3a-201ENSMUST00000043767 Synj1Q8CHC4 1574 aa39,29■■■■□ 3,88
Upf3a-201ENSMUST00000043767 CftrP26361 1476 aa39,2■■■■□ 3,87
Upf3a-201ENSMUST00000043767 Iqgap2Q3UQ44 1575 aa39,17■■■■□ 3,86
Upf3a-201ENSMUST00000043767 Cttnbp2B9EJA2 1648 aa39,04■■■■□ 3,84
Upf3a-201ENSMUST00000043767 Esf1Q3V1V3 845 aaKnown RBP38,68■■■■□ 3,78
Upf3a-201ENSMUST00000043767 Thoc2B1AZI6 1594 aaKnown RBP38,65■■■■□ 3,78
Upf3a-201ENSMUST00000043767 Ercc6F8VPZ5 1481 aa38,65■■■■□ 3,78
Upf3a-201ENSMUST00000043767 Wdr62Q3U3T8 1523 aa38,62■■■■□ 3,77
Upf3a-201ENSMUST00000043767 Frmpd1A2AKB4 1549 aa38,62■■■■□ 3,77
Upf3a-201ENSMUST00000043767 Golga3P55937 1487 aa38,5■■■■□ 3,75
Upf3a-201ENSMUST00000043767 Cngb1E1AZ71 1325 aa38,49■■■■□ 3,75
Upf3a-201ENSMUST00000043767 Top2bQ64511 1612 aa38,28■■■■□ 3,72
Upf3a-201ENSMUST00000043767 HrcG5E8J6 738 aa38,26■■■■□ 3,71
Upf3a-201ENSMUST00000043767 Dnajc5bQ9CQ94 199 aa38,19■■■■□ 3,7
Upf3a-201ENSMUST00000043767 Cc2d2aQ8CFW7 1633 aa38,17■■■■□ 3,7
Upf3a-201ENSMUST00000043767 Unc13aQ4KUS2 1712 aa38,12■■■■□ 3,69
Upf3a-201ENSMUST00000043767 Phldb1Q6PDH0 1371 aaKnown RBP38,04■■■■□ 3,68
Upf3a-201ENSMUST00000043767 Fam135aQ6NS59 1506 aa38,01■■■■□ 3,67
Upf3a-201ENSMUST00000043767 Rsf1E9PWW9 1441 aaKnown RBP38■■■■□ 3,67
Upf3a-201ENSMUST00000043767 Ccdc88bQ4QRL3 1481 aa37,94■■■■□ 3,66
Upf3a-201ENSMUST00000043767 Chic1Q8CBW7 227 aa37,9■■■■□ 3,66
Upf3a-201ENSMUST00000043767 Fmn1Q05860 1466 aa37,77■■■■□ 3,64
Upf3a-201ENSMUST00000043767 Ubl4bQ9CQ84 188 aa37,75■■■■□ 3,63
Upf3a-201ENSMUST00000043767 Lamc3Q9R0B6 1581 aa37,7■■■■□ 3,63
Upf3a-201ENSMUST00000043767 Cep164Q5DU05 1446 aa37,69■■■■□ 3,62
Upf3a-201ENSMUST00000043767 Kif15Q6P9L6 1387 aa37,69■■■■□ 3,62
Upf3a-201ENSMUST00000043767 TnnQ80Z71 1560 aa37,65■■■■□ 3,62
Upf3a-201ENSMUST00000043767 Cux2P70298 1426 aa37,37■■■■□ 3,57
Upf3a-201ENSMUST00000043767 Top2aQ01320 1528 aaKnown RBP37,34■■■■□ 3,57
Upf3a-201ENSMUST00000043767 Baz1bQ9Z277 1479 aa37,32■■■■□ 3,57
Upf3a-201ENSMUST00000043767 Il27Q8K3I6 234 aa37,24■■■■□ 3,55
Upf3a-201ENSMUST00000043767 Gab3Q8BSM5 595 aa37,22■■■■□ 3,55
Upf3a-201ENSMUST00000043767 Camsap1A2AHC3 1581 aa37,21■■■■□ 3,55
Upf3a-201ENSMUST00000043767 Mrc2Q64449 1479 aa37,17■■■■□ 3,54
Upf3a-201ENSMUST00000043767 Ccdc18Q640L5 1455 aa37,13■■■■□ 3,53
Upf3a-201ENSMUST00000043767 Npm1Q61937 292 aaKnown RBP37,06■■■■□ 3,52
Upf3a-201ENSMUST00000043767 Rpgrip1Q9EPQ2 1331 aa36,93■■■■□ 3,5
Upf3a-201ENSMUST00000043767 Grin2bQ01097 1482 aa36,84■■■■□ 3,49
Upf3a-201ENSMUST00000043767 LrpprcQ6PB66 1392 aaKnown RBP36,81■■■■□ 3,48
Upf3a-201ENSMUST00000043767 Kif21aQ9QXL2 1672 aa36,78■■■■□ 3,48
Upf3a-201ENSMUST00000043767 Rapgef2Q8CHG7 1496 aa36,77■■■■□ 3,48
Upf3a-201ENSMUST00000043767 PtprkP35822 1457 aa36,76■■■■□ 3,47
Upf3a-201ENSMUST00000043767 NrkQ9R0G8 1455 aa36,7■■■■□ 3,47
Upf3a-201ENSMUST00000043767 Dhx29Q6PGC1 1365 aaKnown RBP36,68■■■■□ 3,46
Upf3a-201ENSMUST00000043767 PogzQ8BZH4 1409 aaKnown RBP36,68■■■■□ 3,46
Upf3a-201ENSMUST00000043767 Shroom4Q1W617 1475 aa36,63■■■■□ 3,45
Upf3a-201ENSMUST00000043767 Npm2Q80W85 207 aa36,62■■■■□ 3,45
Upf3a-201ENSMUST00000043767 Duox2A2AQ99 1517 aa36,57■■■■□ 3,45
Upf3a-201ENSMUST00000043767 Cep162Q6ZQ06 1403 aa36,51■■■■□ 3,44
Upf3a-201ENSMUST00000043767 Efcab5A0JP43 1406 aa36,48■■■■□ 3,43
Upf3a-201ENSMUST00000043767 Crocc2F6XLV1 1638 aa36,45■■■■□ 3,43
Upf3a-201ENSMUST00000043767 Eif4g1Q6NZJ6 1600 aaKnown RBP36,39■■■■□ 3,42
Upf3a-201ENSMUST00000043767 Arhgap35Q91YM2 1499 aa36,34■■■■□ 3,41
Upf3a-201ENSMUST00000043767 Samd9lQ69Z37 1561 aa36,33■■■■□ 3,41
Upf3a-201ENSMUST00000043767 Plb1Q3TTY0 1478 aa36,32■■■■□ 3,41
Upf3a-201ENSMUST00000043767 Lrriq1Q0P5X1 1673 aa36,3■■■■□ 3,4
Upf3a-201ENSMUST00000043767 Myt1lP97500 1187 aa36,29■■■■□ 3,4
Upf3a-201ENSMUST00000043767 Urb2E9Q7L1 1524 aaKnown RBP36,28■■■■□ 3,4
Upf3a-201ENSMUST00000043767 Zeb1Q64318 1117 aa36,23■■■■□ 3,39
Upf3a-201ENSMUST00000043767 Mroh2bQ7M6Y6 1581 aa36,22■■■■□ 3,39
Upf3a-201ENSMUST00000043767 Map3k1P53349 1493 aa36,12■■■■□ 3,37
Upf3a-201ENSMUST00000043767 Rad54l2Q99NG0 1466 aa36,12■■■■□ 3,37
Upf3a-201ENSMUST00000043767 SynmQ70IV5 1561 aa36,04■■■■□ 3,36
Upf3a-201ENSMUST00000043767 Ehmt2Q9Z148 1263 aaKnown RBP36,01■■■■□ 3,36
Upf3a-201ENSMUST00000043767 Acin1Q9JIX8 1338 aaKnown RBP36■■■■□ 3,35
Upf3a-201ENSMUST00000043767 Disp1Q3TDN0 1521 aa36■■■■□ 3,35
Upf3a-201ENSMUST00000043767 Ift140E9PY46 1464 aa35,95■■■■□ 3,35
Upf3a-201ENSMUST00000043767 Clip1Q922J3 1391 aa35,95■■■■□ 3,35
Upf3a-201ENSMUST00000043767 AqrQ8CFQ3 1481 aaKnown RBP35,91■■■■□ 3,34
Upf3a-201ENSMUST00000043767 Magi3Q9EQJ9 1476 aa35,91■■■■□ 3,34
Upf3a-201ENSMUST00000043767 Carmil1Q6EDY6 1374 aa35,87■■■■□ 3,33
Upf3a-201ENSMUST00000043767 Grin2aP35436 1464 aa35,85■■■■□ 3,33
Upf3a-201ENSMUST00000043767 Pla2r1Q62028 1487 aa35,84■■■■□ 3,33
Upf3a-201ENSMUST00000043767 Setd1bQ8CFT2 1985 aa35,77■■■■□ 3,32
Upf3a-201ENSMUST00000043767 Nup160Q9Z0W3 1402 aaKnown RBP35,76■■■■□ 3,31
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