RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Sh2d1aO88890 126 aa6.27□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Tmem223Q9CQE2 199 aaKnown RBP6.27□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Defa2P28309 93 aa6.26□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Lgals4Q8K419 326 aa6.26□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Lyrm7Q9DA03 104 aa6.26□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Esm1Q9QYY7 184 aa6.26□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Ighv1-49A0A0A6YWX2 117 aa6.26□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Spink1P09036 80 aa6.26□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 4930415O20RikQ8CDT5 131 aa6.26□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Q8R092 253 aa6.26□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Rab37Q9JKM7 223 aa6.26□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Dnah14A0A140LIJ4 4489 aa6.25□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Gm867A0A1W2P7T4 151 aa6.25□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Scgb1b24B1B0N6 92 aa6.25□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Defa3P28310 93 aa6.25□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Defa10P50708 93 aa6.25□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Defa15P50713 93 aa6.25□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Smim20D3Z7Q2 69 aa6.25□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Trav13n-1A0A0G2JEU8 110 aa6.24□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Gm9513B3GLJ6 99 aa6.24□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Znf740Q6NZQ6 180 aa6.24□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Igkv6-13A0A0G2JGY3 119 aa6.24□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Trbv13-2A0A140T8N6 113 aa6.24□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Vmo1Q5SXG7 201 aa6.24□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Gm5617Q91VN2 117 aa6.24□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Gm11213A0A1B0GR83 88 aa6.24□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Defb47Q30KN1 79 aa6.24□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Wnk1P83741 2377 aa6.24□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Trav13-4-dv7A0A075B6C2 110 aa6.23□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Dnah7bL7N1Y0 4068 aa6.23□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Ighv8-13A0A075B5Y0 101 aa6.23□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Cops9Q3U898 57 aa6.23□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Ly6hQ9WUC3 139 aa6.23□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Rpl28P41105 137 aaKnown RBP6.22□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Gm28269A0A087WSG3 125 aa6.22□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Gm904Q3V2L5 102 aa6.22□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 C530025M09RikF6RGA8 229 aa6.22□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 RetnQ99P87 114 aa6.22□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 Ighv8-11A0A075B5X4 119 aa6.21□□□□□ -1.41
Ctnna1-201ENSMUST00000042345 PrcdQ00LT2 53 aa6.21□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Lage3Q9CR70 148 aa6.21□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 AtrQ9JKK8 2635 aa6.21□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Gm7257D3YX25 99 aa6.21□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Trav3-1Q5R1I8 114 aa6.21□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 P01755 137 aa6.2□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Gm9903Q8C9Y8 129 aa6.2□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Lst1O08843 95 aa6.2□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 PkigO70139 76 aa6.2□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Dand5Q76LW6 185 aa6.2□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 ApcQ61315 2845 aa6.2□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Fn1P11276 2477 aaKnown RBP6.19□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Leap2Q91V13 76 aa6.19□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 MrapQ9D159 127 aa6.19□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Trav7-6A0A075B640 112 aa6.19□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Igkv1-117A0A140T8M0 119 aa6.19□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Krtap11-1E9Q2E9 183 aa6.19□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Rpl13aP19253 203 aaKnown RBP6.19□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Atp5g3P56384 141 aa6.19□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Csdc2Q91YQ3 154 aa6.19□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Atp5g1Q9CR84 136 aa6.19□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Trav13d-4A0A0G2JFX3 110 aa6.19□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 MalO09198 153 aa6.19□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Gm10845Q3UNY9 185 aa6.19□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Gm10647E9Q8X0 124 aa6.18□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Tcl1b3P56842 122 aa6.18□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Tcl1b5P56845 121 aa6.18□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Q9DAQ5 155 aa6.18□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Spry2Q9QXV8 315 aa6.18□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 CnbpP53996 178 aaKnown RBP6.18□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Ighv2-9A0A075B5Q5 116 aa6.18□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Ighv1-56A0A0A6YXG2 117 aa6.18□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Gm4861Q8C5A4 106 aa6.18□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 E130114P18RikF6S0S7 154 aa6.17□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 6430550D23RikE9Q1X6 194 aa6.17□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Dad1P61804 113 aa6.17□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Trav9d-4A0A0G2JG37 103 aa6.17□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 EnhoQ8K1D8 76 aa6.17□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Tomm7Q9D173 55 aa6.17□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 PolqQ8CGS6 2544 aa6.16□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 9530053A07RikE9PVG8 2581 aa6.16□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Fras1Q80T14 4010 aa6.16□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Srrm2Q8BTI8 2703 aaKnown RBP6.16□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 P01819 144 aa6.16□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 PemtQ61907 199 aa6.16□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Higd2aQ9CQJ1 106 aa6.16□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Prp2P05143 317 aa6.15□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Gm29423A0A087WRM1 55 aa6.15□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Snhg11Q4G0K9 87 aa6.15□□□□□ -1.42
Ctnna1-201ENSMUST00000042345 Hivep3A2A884 2348 aa6.15□□□□□ -1.43
Ctnna1-201ENSMUST00000042345 Igkv1-99F6XWB2 120 aa6.14□□□□□ -1.43
Ctnna1-201ENSMUST00000042345 SelenowP63300 88 aa6.14□□□□□ -1.43
Ctnna1-201ENSMUST00000042345 Cryba4Q9JJV0 196 aa6.14□□□□□ -1.43
Ctnna1-201ENSMUST00000042345 E130208F15RikQ3UPV3 143 aa6.14□□□□□ -1.43
Ctnna1-201ENSMUST00000042345 Wfdc17Q5SSJ1 76 aa6.14□□□□□ -1.43
Ctnna1-201ENSMUST00000042345 Trav9n-4A0A075B631 113 aa6.14□□□□□ -1.43
Ctnna1-201ENSMUST00000042345 Defa1P11477 93 aa6.14□□□□□ -1.43
Ctnna1-201ENSMUST00000042345 TeppQ6IMH0 216 aa6.14□□□□□ -1.43
Ctnna1-201ENSMUST00000042345 4930544G11RikQ9CR99 193 aa6.14□□□□□ -1.43
Ctnna1-201ENSMUST00000042345 Gm11020F6ZGD5 61 aa6.13□□□□□ -1.43
Ctnna1-201ENSMUST00000042345 1700020N15RikL7MTX3 112 aa6.13□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 58.9 ms