RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 B9d2Q3UK10 175 aa12.22□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Defb45Q3V490 66 aa12.22□□□□□ -0.45
Col17a1-201ENSMUST00000026045 4930556J24RikQ9D4U7 146 aa12.22□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Ovol3D3YYM0 189 aa12.22□□□□□ -0.45
Col17a1-201ENSMUST00000026045 CrygeQ03740 174 aa12.22□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Ighv2-3A0A075B696 115 aa12.21□□□□□ -0.45
Col17a1-201ENSMUST00000026045 P06329 120 aa12.21□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Sptbn4E9PX29 2561 aa12.21□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Kiaa1549Q68FD9 1940 aa12.21□□□□□ -0.45
Col17a1-201ENSMUST00000026045 Fgf23Q9EPC2 251 aa12.21□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Rif1Q6PR54 2419 aaKnown RBP12.2□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Ighv10-3A0A075B5T6 119 aa12.19□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Igkv3-5A0A140T8M6 119 aa12.19□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Znf575Q3TXZ1 239 aa12.19□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Gm5142Q8C5X9 133 aa12.19□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Gm10226O88253 85 aa12.19□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Gm9573F7C950 1606 aa12.18□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Rtl10D3YWW5 146 aa12.18□□□□□ -0.46
Col17a1-201ENSMUST00000026045 PtprbB2RU80 1998 aa12.17□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Gphb5Q812B2 130 aa12.16□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Coa6Q8BGD8 79 aa12.16□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Gm10549Q3URY4 149 aa12.16□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Gm3285A0A1W2P7U0 201 aa12.16□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Plac8l1Q08EJ0 177 aa12.16□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Psmb11Q8BG41 302 aa12.15□□□□□ -0.46
Col17a1-201ENSMUST00000026045 UtrnE9Q6R7 3430 aa12.15□□□□□ -0.46
Col17a1-201ENSMUST00000026045 PlaurP35456 327 aa12.15□□□□□ -0.46
Col17a1-201ENSMUST00000026045 Gm10300Q8C8P7 189 aa12.15□□□□□ -0.47
Col17a1-201ENSMUST00000026045 PcntP48725 2898 aa12.15□□□□□ -0.47
Col17a1-201ENSMUST00000026045 Ppp1r32Q148A4 427 aa12.14□□□□□ -0.47
Col17a1-201ENSMUST00000026045 Defb13Q8R2I4 64 aa12.12□□□□□ -0.47
Col17a1-201ENSMUST00000026045 Col27a1Q5QNQ9 1845 aa12.12□□□□□ -0.47
Col17a1-201ENSMUST00000026045 7530416G11RikJ3QJX6 159 aa12.11□□□□□ -0.47
Col17a1-201ENSMUST00000026045 P84750 121 aa12.11□□□□□ -0.47
Col17a1-201ENSMUST00000026045 LhbO09108 141 aa12.11□□□□□ -0.47
Col17a1-201ENSMUST00000026045 Wfdc12Q9JHY3 85 aa12.11□□□□□ -0.47
Col17a1-201ENSMUST00000026045 Ighv1-59A0A0A6YXE0 117 aa12.11□□□□□ -0.47
Col17a1-201ENSMUST00000026045 Sprr2jO70561 109 aa12.11□□□□□ -0.47
Col17a1-201ENSMUST00000026045 P01745 121 aa12.11□□□□□ -0.47
Col17a1-201ENSMUST00000026045 Higd2aQ9CQJ1 106 aa12.1□□□□□ -0.47
Col17a1-201ENSMUST00000026045 AI854703Q8BIN3 203 aa12.1□□□□□ -0.47
Col17a1-201ENSMUST00000026045 AcanQ61282 2132 aaKnown RBP12.09□□□□□ -0.47
Col17a1-201ENSMUST00000026045 1700056E22RikF7CNM6 234 aa12.09□□□□□ -0.47
Col17a1-201ENSMUST00000026045 Ifitm6A0A1B0GS75 124 aa12.09□□□□□ -0.47
Col17a1-201ENSMUST00000026045 Pkd1l2Q7TN88 2461 aa12.08□□□□□ -0.47
Col17a1-201ENSMUST00000026045 Gm10267M0QWD8 85 aa12.08□□□□□ -0.48
Col17a1-201ENSMUST00000026045 Gm8439G3UWA7 96 aa12.08□□□□□ -0.48
Col17a1-201ENSMUST00000026045 Cdc42se2Q8BGH7 84 aa12.08□□□□□ -0.48
Col17a1-201ENSMUST00000026045 Defb38Q7TNV7 63 aa12.07□□□□□ -0.48
Col17a1-201ENSMUST00000026045 Igkv3-10A0A0G2JGN0 119 aa12.07□□□□□ -0.48
Col17a1-201ENSMUST00000026045 Reg3bP35230 175 aa12.07□□□□□ -0.48
Col17a1-201ENSMUST00000026045 Gm10490F6VBM2 120 aa12.06□□□□□ -0.48
Col17a1-201ENSMUST00000026045 BC025920Q3US60 128 aa12.06□□□□□ -0.48
Col17a1-201ENSMUST00000026045 Fhl2O70433 279 aa12.05□□□□□ -0.48
Col17a1-201ENSMUST00000026045 B230217C12RikE9Q3Z1 139 aa12.05□□□□□ -0.48
Col17a1-201ENSMUST00000026045 Ighv1-63A0A075B5X2 117 aa12.04□□□□□ -0.48
Col17a1-201ENSMUST00000026045 Obox2E9PXV9 151 aa12.04□□□□□ -0.48
Col17a1-201ENSMUST00000026045 Fam19a3Q7TPG6 132 aa12.03□□□□□ -0.48
Col17a1-201ENSMUST00000026045 Dnah12Q3V0Q1 3086 aa12.03□□□□□ -0.48
Col17a1-201ENSMUST00000026045 PrlhG3UWC3 86 aa12.03□□□□□ -0.48
Col17a1-201ENSMUST00000026045 Ighv1-56A0A0A6YXG2 117 aa12.03□□□□□ -0.48
Col17a1-201ENSMUST00000026045 Ly6c2P0CW03 131 aa12.03□□□□□ -0.48
Col17a1-201ENSMUST00000026045 4930519P11RikQ9CUJ8 166 aa12.02□□□□□ -0.48
Col17a1-201ENSMUST00000026045 A0A286YCN5 57 aa12.02□□□□□ -0.49
Col17a1-201ENSMUST00000026045 SetxA2AKX3 2646 aa12.01□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Igkv3-3A0A140T8Q0 119 aa12.01□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Gm10509O88255 85 aa12.01□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Cep350E9Q309 3095 aa12.01□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Znf580Q9DB38 172 aa12.01□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Bean1Q9EQG5 255 aa12.01□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Abca2P41234 2434 aa12□□□□□ -0.49
Col17a1-201ENSMUST00000026045 BC067074F6RXI4 2391 aa12□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Cd164l2Q9D6W7 172 aa12□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Igkv3-4A0A140T8Q4 119 aa11.99□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Chd8Q09XV5 2582 aaKnown RBP11.99□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Ankhd1E9PUR0 2548 aaKnown RBP11.98□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Shisa2Q8QZV2 295 aa11.98□□□□□ -0.49
Col17a1-201ENSMUST00000026045 2310034G01RikA0A286YDL3 209 aa11.98□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Myo9aQ8C170 2542 aa11.98□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Hcfc1Q61191 2045 aaKnown RBP11.98□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Ly6gP35461 111 aa11.97□□□□□ -0.49
Col17a1-201ENSMUST00000026045 Tcl1b5P56845 121 aa11.96□□□□□ -0.5
Col17a1-201ENSMUST00000026045 Ighv2-5A0A0A6YY69 116 aa11.95□□□□□ -0.5
Col17a1-201ENSMUST00000026045 Gm5464Q3UY29 175 aa11.94□□□□□ -0.5
Col17a1-201ENSMUST00000026045 Sostdc1Q9CQN4 206 aa11.94□□□□□ -0.5
Col17a1-201ENSMUST00000026045 Krtap27-1E9PX37 202 aa11.93□□□□□ -0.5
Col17a1-201ENSMUST00000026045 6430550D23RikE9Q1X6 194 aa11.93□□□□□ -0.5
Col17a1-201ENSMUST00000026045 3110070M22RikQ9DAQ7 118 aa11.91□□□□□ -0.5
Col17a1-201ENSMUST00000026045 E130114P18RikF6S0S7 154 aa11.91□□□□□ -0.5
Col17a1-201ENSMUST00000026045 Nav3Q80TN7 2359 aa11.91□□□□□ -0.5
Col17a1-201ENSMUST00000026045 Gm11213A0A1B0GR83 88 aa11.9□□□□□ -0.5
Col17a1-201ENSMUST00000026045 Col5a1O88207 1838 aa11.9□□□□□ -0.5
Col17a1-201ENSMUST00000026045 Odf3l2Q3TZ65 277 aa11.9□□□□□ -0.5
Col17a1-201ENSMUST00000026045 Prr9Q8BV84 116 aa11.89□□□□□ -0.51
Col17a1-201ENSMUST00000026045 CrygfQ9CXV3 174 aa11.89□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Lrrk2Q5S006 2527 aa11.89□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Gm28374F6SG70 93 aa11.89□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Ptpn13Q64512 2453 aa11.88□□□□□ -0.51
Col17a1-201ENSMUST00000026045 1700012A03RikQ9DAF1 130 aa11.88□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Cdc42se1Q8BHL7 80 aa11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 49.7 ms