RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 E130114P18RikF6S0S7 154 aa11.07□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Fam19a5Q91WE9 132 aa11.07□□□□□ -0.64
Col2a1-201ENSMUST00000023123 A0A286YE49 62 aa11.06□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Gm8439G3UWA7 96 aa11.06□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Q8K1L6 76 aa11.06□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Gm11011D3Z3L9 86 aa11.06□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Trbv13-2A0A140T8N6 113 aa11.06□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Igkv8-21A0A140T8P7 120 aa11.06□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Defb42Q8BVB5 75 aa11.06□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Ighv2-9-1A0A075B697 116 aa11.05□□□□□ -0.64
Col2a1-201ENSMUST00000023123 4930556J24RikQ9D4U7 146 aa11.05□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Tln1P26039 2541 aaKnown RBP11.05□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Q9DAB9 146 aa11.05□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Piezo2Q8CD54 2822 aa11.05□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Znf575Q3TXZ1 239 aa11.04□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Gm10845Q3UNY9 185 aa11.04□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Gm9922Q8C3P1 144 aa11.04□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Gm10135F6TEE5 83 aa11.04□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Nav3Q80TN7 2359 aa11.04□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Gm5142Q8C5X9 133 aa11.04□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Lce6aD3YV94 81 aa11.03□□□□□ -0.64
Col2a1-201ENSMUST00000023123 ColqO35348 457 aa11.03□□□□□ -0.64
Col2a1-201ENSMUST00000023123 B230217C12RikE9Q3Z1 139 aa11.03□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Flg2Q2VIS4 2362 aa11.02□□□□□ -0.64
Col2a1-201ENSMUST00000023123 TeppQ6IMH0 216 aa11.02□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Sprr2jO70561 109 aa11.02□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Rtl10D3YWW5 146 aa11.02□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Crip3Q6Q6R3 243 aa11.02□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Gm10549Q3URY4 149 aa11.01□□□□□ -0.65
Col2a1-201ENSMUST00000023123 2310009B15RikA0A0A6YWI4 143 aa11.01□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Cdip1Q9DB75 208 aa11.01□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Pcsk5Q04592 1877 aa11.01□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Col4a4Q9QZR9 1682 aa11.01□□□□□ -0.65
Col2a1-201ENSMUST00000023123 4930432M17RikQ3V0W9 174 aa11.01□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Gm26566Q8CAC1 153 aa11.01□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Wfdc15aQ8BH89 80 aa11□□□□□ -0.65
Col2a1-201ENSMUST00000023123 UqcrqQ9CQ69 82 aa11□□□□□ -0.65
Col2a1-201ENSMUST00000023123 U90926O08546 118 aa11□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Myo9aQ8C170 2542 aa10.99□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Abca2P41234 2434 aa10.99□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Ifitm6A0A1B0GS75 124 aa10.98□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Shisa2Q8QZV2 295 aa10.98□□□□□ -0.65
Col2a1-201ENSMUST00000023123 P84750 121 aa10.97□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Crip2Q9DCT8 208 aaKnown RBP10.97□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Pla2g1bQ9Z0Y2 146 aa10.97□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Ankhd1E9PUR0 2548 aaKnown RBP10.97□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Gm42715A0A087WP63 3095 aaKnown RBP10.97□□□□□ -0.65
Col2a1-201ENSMUST00000023123 BC025920Q3US60 128 aa10.97□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Ep400Q8CHI8 3072 aaKnown RBP10.96□□□□□ -0.65
Col2a1-201ENSMUST00000023123 Gpha2Q925Q5 128 aa10.95□□□□□ -0.66
Col2a1-201ENSMUST00000023123 SycnQ8VCK7 134 aa10.95□□□□□ -0.66
Col2a1-201ENSMUST00000023123 P06329 120 aa10.95□□□□□ -0.66
Col2a1-201ENSMUST00000023123 H2al1kJ3QP08 105 aa10.94□□□□□ -0.66
Col2a1-201ENSMUST00000023123 A930009A15RikG3UYI6 118 aa10.94□□□□□ -0.66
Col2a1-201ENSMUST00000023123 Psmb11Q8BG41 302 aa10.94□□□□□ -0.66
Col2a1-201ENSMUST00000023123 Ttc28Q80XJ3 2450 aa10.94□□□□□ -0.66
Col2a1-201ENSMUST00000023123 FshbQ60687 130 aa10.94□□□□□ -0.66
Col2a1-201ENSMUST00000023123 PscaP57096 123 aa10.93□□□□□ -0.66
Col2a1-201ENSMUST00000023123 Pkd1l2Q7TN88 2461 aa10.93□□□□□ -0.66
Col2a1-201ENSMUST00000023123 1700074P13RikQ9D9G7 251 aa10.92□□□□□ -0.66
Col2a1-201ENSMUST00000023123 Wfdc13Q5DQQ6 81 aa10.91□□□□□ -0.66
Col2a1-201ENSMUST00000023123 Znf706Q9D115 76 aaKnown RBP10.91□□□□□ -0.66
Col2a1-201ENSMUST00000023123 Gm5153P01627 120 aa10.9□□□□□ -0.66
Col2a1-201ENSMUST00000023123 CrygfQ9CXV3 174 aa10.9□□□□□ -0.66
Col2a1-201ENSMUST00000023123 Gm3443F7CCV5 94 aa10.9□□□□□ -0.66
Col2a1-201ENSMUST00000023123 SnurfQ9WU12 71 aa10.89□□□□□ -0.67
Col2a1-201ENSMUST00000023123 Ntn5Q3UQ22 452 aa10.89□□□□□ -0.67
Col2a1-201ENSMUST00000023123 SbsponQ3UPR9 264 aa10.88□□□□□ -0.67
Col2a1-201ENSMUST00000023123 Igkv3-12A0A140T8P0 119 aa10.87□□□□□ -0.67
Col2a1-201ENSMUST00000023123 PtprqP0C5E4 2300 aa10.87□□□□□ -0.67
Col2a1-201ENSMUST00000023123 Tns1E9Q0S6 1888 aaKnown RBP10.87□□□□□ -0.67
Col2a1-201ENSMUST00000023123 Gm10267M0QWD8 85 aa10.86□□□□□ -0.67
Col2a1-201ENSMUST00000023123 Zfand2aQ9JII7 171 aa10.86□□□□□ -0.67
Col2a1-201ENSMUST00000023123 PcntP48725 2898 aa10.86□□□□□ -0.67
Col2a1-201ENSMUST00000023123 3110070M22RikQ9DAQ7 118 aa10.86□□□□□ -0.67
Col2a1-201ENSMUST00000023123 H2al1mQ9DAD9 105 aa10.86□□□□□ -0.67
Col2a1-201ENSMUST00000023123 Prr9Q8BV84 116 aa10.86□□□□□ -0.67
Col2a1-201ENSMUST00000023123 Notch2O35516 2470 aa10.86□□□□□ -0.67
Col2a1-201ENSMUST00000023123 Ighv1-56A0A0A6YXG2 117 aa10.85□□□□□ -0.67
Col2a1-201ENSMUST00000023123 Nupr2Q497P3 102 aa10.85□□□□□ -0.67
Col2a1-201ENSMUST00000023123 UtrnE9Q6R7 3430 aa10.84□□□□□ -0.67
Col2a1-201ENSMUST00000023123 Igkv8-30A0A140T8M3 121 aa10.84□□□□□ -0.67
Col2a1-201ENSMUST00000023123 Ptpn13Q64512 2453 aa10.84□□□□□ -0.67
Col2a1-201ENSMUST00000023123 Defb45Q3V490 66 aa10.84□□□□□ -0.67
Col2a1-201ENSMUST00000023123 Gm17509Q9CZ61 145 aa10.83□□□□□ -0.68
Col2a1-201ENSMUST00000023123 PtprbB2RU80 1998 aa10.83□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Lrrk2Q5S006 2527 aa10.83□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Apoc4Q61268 124 aa10.83□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Csdc2Q91YQ3 154 aa10.82□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Gm9767G3X930 207 aa10.81□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Cd164l2Q9D6W7 172 aa10.81□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Ighv2-9A0A075B5Q5 116 aa10.8□□□□□ -0.68
Col2a1-201ENSMUST00000023123 C130032M10RikQ8C888 123 aa10.8□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Gm10570F6VB42 170 aa10.8□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Odf3l2Q3TZ65 277 aa10.8□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Defb38Q7TNV7 63 aa10.8□□□□□ -0.68
Col2a1-201ENSMUST00000023123 SetxA2AKX3 2646 aa10.8□□□□□ -0.68
Col2a1-201ENSMUST00000023123 D730001G18RikA0A087WQU7 115 aa10.79□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Coa6Q8BGD8 79 aa10.79□□□□□ -0.68
Col2a1-201ENSMUST00000023123 Gm3285A0A1W2P7U0 201 aa10.79□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 54.1 ms