RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Cox6b1P56391 86 aaKnown RBP8.52□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Vmo1Q5SXG7 201 aa8.52□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Nbeal1E9PYP2 2688 aa8.51□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Igkv1-117A0A140T8M0 119 aa8.51□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Tmem86bQ497J1 226 aa8.51□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Defa21Q8C1P2 93 aa8.51□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Utp20Q5XG71 2788 aaKnown RBP8.5□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Chchd7Q8K2Q5 85 aa8.5□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Smim26Q3V460 107 aa8.5□□□□□ -1.05
Rfx1-201ENSMUST00000005600 C2cd3Q52KB6 2323 aa8.5□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Zfand2aQ9JII7 171 aa8.49□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Trav13n-2A0A0G2JF93 110 aa8.49□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Mrpl52Q9D0Y8 121 aa8.49□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Samd13D3YUG0 102 aa8.48□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Trav13-1A0A075B644 110 aa8.48□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Tm2d2Q8R0I4 213 aa8.48□□□□□ -1.05
Rfx1-201ENSMUST00000005600 FlnbQ80X90 2602 aaKnown RBP8.48□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Lyrm9Q3UN90 78 aa8.48□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Gm10300Q8C8P7 189 aa8.48□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Znf414Q9DCK4 299 aa8.48□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Ccl21aP84444 133 aa8.47□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Ccl21bP86792 133 aa8.47□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Ccl21cP86793 133 aa8.47□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Defa23Q5G866 93 aa8.47□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Cep192E9Q4Y4 2514 aaKnown RBP8.47□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Lypd5Q9D7Z7 256 aa8.47□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Dand5Q76LW6 185 aa8.47□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Ighv8-11A0A075B5X4 119 aa8.46□□□□□ -1.05
Rfx1-201ENSMUST00000005600 Igkv1-99F6XWB2 120 aa8.46□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Defb26Q30KN7 186 aa8.46□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Gm10772F7AIG4 85 aa8.46□□□□□ -1.06
Rfx1-201ENSMUST00000005600 4930518I15RikQ3V2W7 57 aa8.46□□□□□ -1.06
Rfx1-201ENSMUST00000005600 MobpQ9D2P8 170 aa8.46□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Ighv2-9-1A0A075B697 116 aa8.45□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Defb50Q6TU36 73 aa8.45□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Chd6A3KFM7 2711 aa8.45□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Hist1h4aP62806 103 aaKnown RBP8.44□□□□□ -1.06
Rfx1-201ENSMUST00000005600 FlncQ8VHX6 2726 aaKnown RBP8.44□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Brwd1Q921C3 2304 aa8.43□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Ighv1-56A0A0A6YXG2 117 aa8.43□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Rpl18aP62717 176 aaKnown RBP8.43□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Rpl39lQ9CQD0 51 aa8.43□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Muc4Q8JZM8 3443 aa8.43□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Gpha2Q925Q5 128 aa8.42□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Gm5142Q8C5X9 133 aa8.41□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Naa38Q9D2U5 125 aa8.41□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Celsr2Q9R0M0 2920 aa8.41□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Chd9Q8BYH8 2885 aa8.41□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Igkv4-72A0A0B4J1I4 117 aa8.41□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Tmem254aP0DN89 123 aa8.41□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Tmem254bP0DN90 123 aa8.41□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Tmem254cP0DN91 123 aa8.41□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Prh1P05142 261 aa8.4□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Q8R092 253 aa8.4□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Tmem223Q9CQE2 199 aaKnown RBP8.4□□□□□ -1.06
Rfx1-201ENSMUST00000005600 A830031A19RikQ8BNT5 113 aa8.4□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Pla2g1bQ9Z0Y2 146 aa8.4□□□□□ -1.06
Rfx1-201ENSMUST00000005600 Tmem243B2RVB9 118 aa8.4□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Ankrd17Q99NH0 2603 aaKnown RBP8.4□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Igkv2-109A0A075B5K6 120 aa8.4□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Trav13-2A0A075B649 110 aa8.39□□□□□ -1.07
Rfx1-201ENSMUST00000005600 4930519P11RikQ9CUJ8 166 aa8.39□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Fam19a5Q91WE9 132 aa8.39□□□□□ -1.07
Rfx1-201ENSMUST00000005600 OtogO55225 2910 aa8.39□□□□□ -1.07
Rfx1-201ENSMUST00000005600 7530416G11RikJ3QJX6 159 aa8.39□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Igkv8-18A0A0B4J1J3 123 aa8.38□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Klk11Q9QYN3 276 aa8.38□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Brk1Q91VR8 75 aa8.38□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Mrpl55Q9CZ83 127 aa8.38□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Ifitm6A0A1B0GS75 124 aa8.37□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Klk12B2RVZ0 247 aa8.37□□□□□ -1.07
Rfx1-201ENSMUST00000005600 1810062G17RikG3X8Y2 129 aa8.37□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Spink4O35679 86 aa8.37□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Serp2Q6TAW2 65 aa8.37□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Gm43218A0A0G2JGT0 114 aa8.37□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Gm10845Q3UNY9 185 aa8.37□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Ntn5Q3UQ22 452 aa8.36□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Igfn1Q3KNY0 2849 aa8.36□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Odf3l2Q3TZ65 277 aa8.36□□□□□ -1.07
Rfx1-201ENSMUST00000005600 4930535I16RikQ9CUI2 172 aa8.36□□□□□ -1.07
Rfx1-201ENSMUST00000005600 MtorQ9JLN9 2549 aa8.36□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Tcl1b3P56842 122 aa8.36□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Rps28P62858 69 aaKnown RBP8.36□□□□□ -1.07
Rfx1-201ENSMUST00000005600 PrcdQ00LT2 53 aa8.35□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Ormdl1Q921I0 153 aa8.35□□□□□ -1.07
Rfx1-201ENSMUST00000005600 2010109I03RikQ9CQ11 111 aa8.35□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Ubl5Q9EPV8 73 aa8.35□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Ankrd11E9Q4F7 2643 aa8.35□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Igkv4-53A0A0G2JFC6 119 aa8.34□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Gm5153P01627 120 aa8.34□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Ly6c2P0CW03 131 aa8.34□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Tmem258P61166 79 aa8.34□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Trav9n-4A0A075B631 113 aa8.34□□□□□ -1.07
Rfx1-201ENSMUST00000005600 Igkv8-16A0A0G2JDG9 121 aa8.34□□□□□ -1.07
Rfx1-201ENSMUST00000005600 MplkipQ9D011 178 aa8.34□□□□□ -1.07
Rfx1-201ENSMUST00000005600 MifP34884 115 aaKnown RBP8.33□□□□□ -1.08
Rfx1-201ENSMUST00000005600 Igkv3-9A0A140T8P4 119 aa8.33□□□□□ -1.08
Rfx1-201ENSMUST00000005600 Gm10518F6UQQ9 182 aa8.33□□□□□ -1.08
Rfx1-201ENSMUST00000005600 Leap2Q91V13 76 aa8.33□□□□□ -1.08
Rfx1-201ENSMUST00000005600 Defa20Q45VN2 95 aa8.33□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 6.9 ms