RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 Ighv1-80A0A075B5Y3 117 aa6.47□□□□□ -1.37
Prpf40a-208ENSMUST00000210789 Trbv13-2A0A140T8N6 113 aa6.47□□□□□ -1.37
Prpf40a-208ENSMUST00000210789 Gm20604F8WIA3 75 aa6.47□□□□□ -1.37
Prpf40a-208ENSMUST00000210789 Tmem254aP0DN89 123 aa6.47□□□□□ -1.37
Prpf40a-208ENSMUST00000210789 Tmem254bP0DN90 123 aa6.47□□□□□ -1.37
Prpf40a-208ENSMUST00000210789 Tmem254cP0DN91 123 aa6.47□□□□□ -1.37
Prpf40a-208ENSMUST00000210789 Q4KKZ1 196 aa6.47□□□□□ -1.37
Prpf40a-208ENSMUST00000210789 4930524J08RikQ9CUJ5 163 aa6.47□□□□□ -1.37
Prpf40a-208ENSMUST00000210789 1700056E22RikF7CNM6 234 aa6.47□□□□□ -1.37
Prpf40a-208ENSMUST00000210789 Trank1Q8BV79 2999 aa6.47□□□□□ -1.37
Prpf40a-208ENSMUST00000210789 Bahcc1Q3UHR0 2643 aa6.47□□□□□ -1.37
Prpf40a-208ENSMUST00000210789 Zfand3Q497H0 227 aa6.46□□□□□ -1.37
Prpf40a-208ENSMUST00000210789 Mob4Q6PEB6 225 aa6.46□□□□□ -1.37
Prpf40a-208ENSMUST00000210789 Trav13n-2A0A0G2JF93 110 aa6.46□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Ly6lH3BJG9 140 aa6.46□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Lst1O08843 95 aa6.46□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Spink8Q09TK9 105 aa6.46□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Fam19a3Q7TPG6 132 aa6.46□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Bub3Q9WVA3 326 aa6.46□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Wisp2Q9Z0G4 251 aa6.46□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Gm9925F6T2U3 160 aa6.46□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Rnf5O35445 180 aa6.46□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 A730015C16RikQ8C992 119 aa6.46□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 P06328 117 aa6.45□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Gm9913Q8BQQ2 135 aa6.45□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Spink6Q8BT20 105 aa6.45□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Gm17727E9Q4V7 109 aa6.45□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Ash1lQ99MY8 2958 aa6.45□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Trav9d-4A0A0G2JG37 103 aa6.45□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Gm10542F6XDR3 90 aa6.45□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Ighv3-4A0A0A6YXF1 117 aa6.44□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Ndufs7Q9DC70 224 aa6.44□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Defb18Q30KP5 85 aa6.44□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Gphb5Q812B2 130 aa6.44□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Ighv1-81A0A075B5Y4 117 aa6.44□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 CrygaP04345 174 aa6.44□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Gm9747Q810H1 104 aa6.44□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Igkv4-53A0A0G2JFC6 119 aa6.43□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Trbv16A0A0B4J1H3 115 aa6.43□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Trav14-1A0A0G2JF94 121 aa6.43□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Gm17732E9Q5I2 61 aa6.43□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 P01748 117 aa6.43□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 AW146154Q3TPQ7 468 aa6.43□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Pou2af1Q64693 256 aa6.43□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 9130230L23RikQ8CC80 163 aa6.43□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 4930442H23RikQ9D5G7 103 aa6.43□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Znf414Q9DCK4 299 aa6.43□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Ighv12-3A0A075B5T1 117 aa6.42□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Ighv1-62-1A0A075B5U3 116 aa6.42□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Nbl1Q61477 178 aa6.42□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Spint4Q9D263 159 aa6.42□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Cd164Q9R0L9 197 aa6.42□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Ubr5Q80TP3 2792 aa6.42□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Igkv2-109A0A075B5K6 120 aa6.42□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 P01823 113 aa6.42□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Rpl36aP83882 106 aaKnown RBP6.42□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Gm10647E9Q8X0 124 aa6.41□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Ndufa12Q7TMF3 145 aaKnown RBP6.41□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Usp9xP70398 2559 aaKnown RBP6.41□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Spint3Q3UW09 88 aa6.41□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Ufsp1Q9CZP0 217 aa6.41□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Ighv1-5A0A0A6YWG2 117 aa6.41□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 B230217C12RikE9Q3Z1 139 aa6.4□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 MsmbO08540 113 aa6.4□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Vpreb2P13373 142 aa6.4□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Dad1P61804 113 aa6.4□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Ppp1r32Q148A4 427 aa6.4□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Defb12Q8K4N3 78 aa6.4□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Chd9Q8BYH8 2885 aa6.4□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Cd99Q8VCN6 175 aa6.4□□□□□ -1.38
Prpf40a-208ENSMUST00000210789 Abca2P41234 2434 aa6.4□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Itpr3P70227 2670 aa6.39□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Muc2Q80Z19 2680 aa6.39□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 1700011M02RikB1AX35 88 aa6.39□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Igkv1-117A0A140T8M0 119 aa6.39□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Fam216bQ8CC14 138 aa6.39□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Cmya5Q70KF4 3739 aa6.39□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Igkv4-59A0A0B4J1I8 117 aa6.39□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Cops9Q3U898 57 aa6.39□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Vmo1Q5SXG7 201 aa6.39□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Ccl21aP84444 133 aa6.38□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Ccl21bP86792 133 aa6.38□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Ccl21cP86793 133 aa6.38□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 1500011B03RikQ3TTH7 73 aa6.38□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 E130208F15RikQ3UPV3 143 aa6.38□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Ighv1-4A0A075B5T4 117 aa6.38□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Lama5Q61001 3718 aa6.38□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 E030018B13RikJ3QMS9 113 aa6.38□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Cox7a1P56392 80 aa6.38□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Ighv1-12A0A0A6YXJ9 117 aa6.37□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 B230359F08RikA0A0B4J1K3 109 aa6.37□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 A0A286YE02 88 aa6.37□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 BlcapP62951 87 aa6.37□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 1700010B08RikQ9DAI7 102 aa6.37□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Gm37988J3QM41 62 aa6.37□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Fxyd5P97808 178 aa6.37□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Odf1Q61999 247 aa6.37□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Gm5878E9PUB3 99 aa6.37□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 E130116L18RikQ8BMV6 101 aa6.37□□□□□ -1.39
Prpf40a-208ENSMUST00000210789 Ighv1-53A0A075B5W3 117 aa6.36□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms