RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 NischQ80TM9 1593 aa15.86■□□□□ 0.13
Prpf40a-208ENSMUST00000210789 Gm35339A0A140LHH9 1649 aa15.51■□□□□ 0.07
Prpf40a-208ENSMUST00000210789 Abcc9P70170 1546 aa15.28■□□□□ 0.04
Prpf40a-208ENSMUST00000210789 Rpgrip1Q9EPQ2 1331 aa15.17■□□□□ 0.02
Prpf40a-208ENSMUST00000210789 Abcc8B2RUS7 1588 aa15.11■□□□□ 0.01
Prpf40a-208ENSMUST00000210789 Pcgf6Q99NA9 353 aa15□□□□□ -0.01
Prpf40a-208ENSMUST00000210789 Ehmt2Q9Z148 1263 aaKnown RBP14.8□□□□□ -0.04
Prpf40a-208ENSMUST00000210789 Rhox8Q6VSS7 320 aa14.74□□□□□ -0.05
Prpf40a-208ENSMUST00000210789 Acin1Q9JIX8 1338 aaKnown RBP14.7□□□□□ -0.06
Prpf40a-208ENSMUST00000210789 Neurod1Q60867 357 aa14.57□□□□□ -0.08
Prpf40a-208ENSMUST00000210789 DiexfQ8BTT6 772 aaKnown RBP14.51□□□□□ -0.09
Prpf40a-208ENSMUST00000210789 Supt5hO55201 1082 aaKnown RBP14.46□□□□□ -0.09
Prpf40a-208ENSMUST00000210789 Las1lA2BE28 776 aaKnown RBP14.38□□□□□ -0.11
Prpf40a-208ENSMUST00000210789 CenpbP27790 599 aa14.35□□□□□ -0.11
Prpf40a-208ENSMUST00000210789 1700123L14RikQ3V2K7 440 aa14.35□□□□□ -0.11
Prpf40a-208ENSMUST00000210789 Bcl11aQ9QYE3 773 aa14.2□□□□□ -0.14
Prpf40a-208ENSMUST00000210789 Csrnp3P59055 597 aa14.2□□□□□ -0.14
Prpf40a-208ENSMUST00000210789 ScribQ80U72 1612 aa14.2□□□□□ -0.14
Prpf40a-208ENSMUST00000210789 Myt1Q8CFC2 1127 aa14.07□□□□□ -0.16
Prpf40a-208ENSMUST00000210789 Gm38655A0A286YDK6 273 aa14.05□□□□□ -0.16
Prpf40a-208ENSMUST00000210789 PrkcshO08795 521 aa14.05□□□□□ -0.16
Prpf40a-208ENSMUST00000210789 Trim41Q5NCC3 630 aa14.01□□□□□ -0.17
Prpf40a-208ENSMUST00000210789 NacadQ5SWP3 1504 aa13.98□□□□□ -0.17
Prpf40a-208ENSMUST00000210789 Dcaf1Q80TR8 1506 aa13.98□□□□□ -0.17
Prpf40a-208ENSMUST00000210789 Kdm5dQ62240 1548 aa13.96□□□□□ -0.17
Prpf40a-208ENSMUST00000210789 Zeb1Q64318 1117 aa13.96□□□□□ -0.18
Prpf40a-208ENSMUST00000210789 Rb1cc1Q9ESK9 1588 aa13.85□□□□□ -0.19
Prpf40a-208ENSMUST00000210789 Ifnlr1Q8CGK5 535 aa13.82□□□□□ -0.2
Prpf40a-208ENSMUST00000210789 Cngb1E1AZ71 1325 aa13.8□□□□□ -0.2
Prpf40a-208ENSMUST00000210789 Amer1Q7TS75 1132 aa13.8□□□□□ -0.2
Prpf40a-208ENSMUST00000210789 Anks4bQ8K3X6 423 aa13.79□□□□□ -0.2
Prpf40a-208ENSMUST00000210789 Aplp2Q06335 707 aa13.7□□□□□ -0.22
Prpf40a-208ENSMUST00000210789 Ccdc180J3QNE4 1664 aa13.69□□□□□ -0.22
Prpf40a-208ENSMUST00000210789 Sall2Q9QX96 1004 aa13.69□□□□□ -0.22
Prpf40a-208ENSMUST00000210789 Baz1aO88379 1555 aa13.67□□□□□ -0.22
Prpf40a-208ENSMUST00000210789 Zcchc6Q5BLK4 1491 aaKnown RBP13.65□□□□□ -0.22
Prpf40a-208ENSMUST00000210789 Ccdc136Q3TVA9 1136 aa13.64□□□□□ -0.23
Prpf40a-208ENSMUST00000210789 Sycp2Q9CUU3 1500 aa13.64□□□□□ -0.23
Prpf40a-208ENSMUST00000210789 Rtl1Q7M732 1744 aa13.58□□□□□ -0.24
Prpf40a-208ENSMUST00000210789 Fam71e1A1L3C1 212 aa13.56□□□□□ -0.24
Prpf40a-208ENSMUST00000210789 Ppargc1bQ8VHJ7 1014 aa13.52□□□□□ -0.25
Prpf40a-208ENSMUST00000210789 Mapk8ip2Q9ERE9 830 aa13.51□□□□□ -0.25
Prpf40a-208ENSMUST00000210789 Crybg2B7ZCC2 1516 aa13.46□□□□□ -0.25
Prpf40a-208ENSMUST00000210789 Wdr66E9Q743 1299 aa13.43□□□□□ -0.26
Prpf40a-208ENSMUST00000210789 Cdk11bP24788 784 aaKnown RBP13.43□□□□□ -0.26
Prpf40a-208ENSMUST00000210789 Nop58Q6DFW4 536 aaKnown RBP13.37□□□□□ -0.27
Prpf40a-208ENSMUST00000210789 SafbD3YXK2 937 aaKnown RBP13.33□□□□□ -0.27
Prpf40a-208ENSMUST00000210789 Ttbk1Q6PCN3 1308 aa13.33□□□□□ -0.28
Prpf40a-208ENSMUST00000210789 BicraF8VPZ9 1578 aa13.29□□□□□ -0.28
Prpf40a-208ENSMUST00000210789 Smarca2Q6DIC0 1577 aa13.25□□□□□ -0.29
Prpf40a-208ENSMUST00000210789 Esf1Q3V1V3 845 aaKnown RBP13.21□□□□□ -0.29
Prpf40a-208ENSMUST00000210789 Aebp2Q9Z248 504 aaKnown RBP13.2□□□□□ -0.3
Prpf40a-208ENSMUST00000210789 Hdac5Q9Z2V6 1113 aa13.2□□□□□ -0.3
Prpf40a-208ENSMUST00000210789 Brd4Q9ESU6 1400 aaKnown RBP13.15□□□□□ -0.31
Prpf40a-208ENSMUST00000210789 Cecr2E9Q2Z1 1453 aa13.14□□□□□ -0.31
Prpf40a-208ENSMUST00000210789 NefmP08553 848 aa13.14□□□□□ -0.31
Prpf40a-208ENSMUST00000210789 Hnrnpul2Q00PI9 745 aaKnown RBP13.11□□□□□ -0.31
Prpf40a-208ENSMUST00000210789 HrcG5E8J6 738 aa13.11□□□□□ -0.31
Prpf40a-208ENSMUST00000210789 Mier1Q5UAK0 511 aa13.11□□□□□ -0.31
Prpf40a-208ENSMUST00000210789 Pknox2Q8BG99 474 aa13.11□□□□□ -0.31
Prpf40a-208ENSMUST00000210789 Pds5bQ4VA53 1446 aaKnown RBP13.04□□□□□ -0.32
Prpf40a-208ENSMUST00000210789 Il27Q8K3I6 234 aa13□□□□□ -0.33
Prpf40a-208ENSMUST00000210789 Fgd1P52734 960 aa12.99□□□□□ -0.33
Prpf40a-208ENSMUST00000210789 Plcd4Q8K3R3 807 aa12.98□□□□□ -0.33
Prpf40a-208ENSMUST00000210789 Ap3b1Q9Z1T1 1105 aa12.98□□□□□ -0.33
Prpf40a-208ENSMUST00000210789 Smarca4Q3TKT4 1613 aaKnown RBP12.98□□□□□ -0.33
Prpf40a-208ENSMUST00000210789 Atad2bE9Q166 1460 aaKnown RBP12.97□□□□□ -0.33
Prpf40a-208ENSMUST00000210789 ClspnQ80YR7 1315 aa12.94□□□□□ -0.34
Prpf40a-208ENSMUST00000210789 CftrP26361 1476 aa12.94□□□□□ -0.34
Prpf40a-208ENSMUST00000210789 Synj1Q8CHC4 1574 aa12.91□□□□□ -0.34
Prpf40a-208ENSMUST00000210789 Anp32aO35381 247 aa12.89□□□□□ -0.35
Prpf40a-208ENSMUST00000210789 Gtf3c3Q3TMP1 882 aa12.85□□□□□ -0.35
Prpf40a-208ENSMUST00000210789 NrdcQ8BHG1 1161 aa12.85□□□□□ -0.35
Prpf40a-208ENSMUST00000210789 Iqgap2Q3UQ44 1575 aa12.85□□□□□ -0.35
Prpf40a-208ENSMUST00000210789 Nolc1E9Q5C9 702 aaKnown RBP12.83□□□□□ -0.35
Prpf40a-208ENSMUST00000210789 Ercc6F8VPZ5 1481 aa12.83□□□□□ -0.35
Prpf40a-208ENSMUST00000210789 Cttnbp2B9EJA2 1648 aa12.82□□□□□ -0.36
Prpf40a-208ENSMUST00000210789 Golga3P55937 1487 aa12.81□□□□□ -0.36
Prpf40a-208ENSMUST00000210789 Pelp1Q9DBD5 1123 aaKnown RBP12.8□□□□□ -0.36
Prpf40a-208ENSMUST00000210789 Gab3Q8BSM5 595 aa12.78□□□□□ -0.36
Prpf40a-208ENSMUST00000210789 Plppr3Q7TPB0 716 aa12.77□□□□□ -0.37
Prpf40a-208ENSMUST00000210789 Rtl5Q5DTT4 599 aa12.77□□□□□ -0.37
Prpf40a-208ENSMUST00000210789 Tnnt3Q9QZ47 272 aa12.76□□□□□ -0.37
Prpf40a-208ENSMUST00000210789 Chic1Q8CBW7 227 aa12.72□□□□□ -0.37
Prpf40a-208ENSMUST00000210789 Upf2A2AT37 1269 aaKnown RBP12.7□□□□□ -0.38
Prpf40a-208ENSMUST00000210789 Supt16hQ920B9 1047 aa12.69□□□□□ -0.38
Prpf40a-208ENSMUST00000210789 Ubl4bQ9CQ84 188 aa12.69□□□□□ -0.38
Prpf40a-208ENSMUST00000210789 Zfp777B9EKF4 885 aa12.67□□□□□ -0.38
Prpf40a-208ENSMUST00000210789 UbtfP25976 765 aaKnown RBP12.67□□□□□ -0.38
Prpf40a-208ENSMUST00000210789 Frmpd1A2AKB4 1549 aa12.67□□□□□ -0.38
Prpf40a-208ENSMUST00000210789 Irx3P81067 507 aa12.67□□□□□ -0.38
Prpf40a-208ENSMUST00000210789 Taok2Q6ZQ29 1240 aa12.64□□□□□ -0.39
Prpf40a-208ENSMUST00000210789 Cep164Q5DU05 1446 aa12.63□□□□□ -0.39
Prpf40a-208ENSMUST00000210789 Wdr62Q3U3T8 1523 aa12.63□□□□□ -0.39
Prpf40a-208ENSMUST00000210789 Rsf1E9PWW9 1441 aaKnown RBP12.62□□□□□ -0.39
Prpf40a-208ENSMUST00000210789 Rtn4Q99P72 1162 aaKnown RBP12.62□□□□□ -0.39
Prpf40a-208ENSMUST00000210789 Phldb1Q6PDH0 1371 aaKnown RBP12.62□□□□□ -0.39
Prpf40a-208ENSMUST00000210789 Kif15Q6P9L6 1387 aa12.6□□□□□ -0.39
Prpf40a-208ENSMUST00000210789 Ccdc88bQ4QRL3 1481 aa12.59□□□□□ -0.39
Prpf40a-208ENSMUST00000210789 Calr4Q3TQS0 420 aa12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms