RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Dmbt1Q60997 2085 aa8.93□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Klk12B2RVZ0 247 aa8.92□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Gm5941Q497P9 117 aa8.92□□□□□ -0.98
Bdnf-205ENSMUST00000111045 P01643 108 aa8.92□□□□□ -0.98
Bdnf-205ENSMUST00000111045 P01753 117 aa8.92□□□□□ -0.98
Bdnf-205ENSMUST00000111045 P04941 107 aa8.92□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Ube2bP63147 152 aa8.92□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Trdv5A0A075B661 115 aa8.91□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Dkk4Q8VEJ3 221 aa8.91□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Fam216bQ8CC14 138 aa8.91□□□□□ -0.98
Bdnf-205ENSMUST00000111045 4930564D02RikQ9D4S4 103 aa8.91□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Ighv1-80A0A075B5Y3 117 aa8.91□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Gm10542F6XDR3 90 aa8.91□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Prr15lQ8JZM2 100 aa8.91□□□□□ -0.98
Bdnf-205ENSMUST00000111045 4930524J08RikQ9CUJ5 163 aa8.91□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Trav13-1A0A075B644 110 aa8.9□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Rpl39lQ9CQD0 51 aa8.9□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Igkv4-61A0A0G2JH00 117 aa8.9□□□□□ -0.98
Bdnf-205ENSMUST00000111045 P06320 134 aa8.9□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Defb33Q30KN3 62 aa8.9□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Gm9913Q8BQQ2 135 aa8.9□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Ifitm1Q9D103 106 aa8.9□□□□□ -0.98
Bdnf-205ENSMUST00000111045 Igkv4-54A0A0G2JES9 117 aa8.9□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Prop1P97458 223 aa8.9□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Ighv1-55A0A075B5W6 117 aa8.89□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Igkv4-59A0A0B4J1I8 117 aa8.89□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Trav9n-4A0A075B631 113 aa8.89□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Igkv4-72A0A0B4J1I4 117 aa8.88□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Col4a2P08122 1707 aa8.88□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Ighv1-74A0A0G2JGK2 117 aa8.88□□□□□ -0.99
Bdnf-205ENSMUST00000111045 P01750 117 aa8.88□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Fxyd5P97808 178 aa8.88□□□□□ -0.99
Bdnf-205ENSMUST00000111045 1700074P13RikQ9D9G7 251 aa8.88□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Fbn2Q61555 2907 aa8.88□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Igkv4-69A0A0B4J1I6 116 aa8.87□□□□□ -0.99
Bdnf-205ENSMUST00000111045 TshbP12656 138 aa8.87□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Chd8Q09XV5 2582 aaKnown RBP8.87□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Hivep2Q3UHF7 2430 aa8.87□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Gm3285A0A1W2P7U0 201 aa8.87□□□□□ -0.99
Bdnf-205ENSMUST00000111045 B230359F08RikA0A0B4J1K3 109 aa8.87□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Ighv1-81A0A075B5Y4 117 aa8.86□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Igkv4-74A0A0B4J1I3 119 aa8.86□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Ighv1-72P01751 139 aa8.86□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Dpm3Q9D1Q4 92 aa8.86□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Gm20499D3Z4G5 72 aa8.85□□□□□ -0.99
Bdnf-205ENSMUST00000111045 CrygfQ9CXV3 174 aa8.85□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Ighv1-49A0A0A6YWX2 117 aa8.85□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Ppp1r32Q148A4 427 aa8.85□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Kiaa1549Q68FD9 1940 aa8.85□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Ptpn13Q64512 2453 aa8.84□□□□□ -0.99
Bdnf-205ENSMUST00000111045 PolqQ8CGS6 2544 aa8.84□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Fam19a3Q7TPG6 132 aa8.84□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Tomm7Q9D173 55 aa8.84□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Ndufs7Q9DC70 224 aa8.84□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Ube2aQ9Z255 152 aa8.84□□□□□ -0.99
Bdnf-205ENSMUST00000111045 Gm15557A6PWY0 234 aa8.83□□□□□ -1
Bdnf-205ENSMUST00000111045 Klk9Q32M27 251 aa8.83□□□□□ -1
Bdnf-205ENSMUST00000111045 Ighv1-50A0A075B5W1 117 aa8.83□□□□□ -1
Bdnf-205ENSMUST00000111045 Ighv3-6P18531 116 aa8.83□□□□□ -1
Bdnf-205ENSMUST00000111045 Gm10192Q3V0S1 108 aa8.83□□□□□ -1
Bdnf-205ENSMUST00000111045 Col27a1Q5QNQ9 1845 aa8.83□□□□□ -1
Bdnf-205ENSMUST00000111045 P01738 130 aa8.82□□□□□ -1
Bdnf-205ENSMUST00000111045 Ighv1-31A0A0A6YWK5 117 aa8.82□□□□□ -1
Bdnf-205ENSMUST00000111045 CnfnQ6PCW6 111 aa8.82□□□□□ -1
Bdnf-205ENSMUST00000111045 P01823 113 aa8.81□□□□□ -1
Bdnf-205ENSMUST00000111045 Ighv12-3A0A075B5T1 117 aa8.81□□□□□ -1
Bdnf-205ENSMUST00000111045 Ighv1-11A0A0A6YWI9 117 aa8.81□□□□□ -1
Bdnf-205ENSMUST00000111045 P01747 120 aa8.81□□□□□ -1
Bdnf-205ENSMUST00000111045 Trav13-2A0A075B649 110 aa8.8□□□□□ -1
Bdnf-205ENSMUST00000111045 Gm11011D3Z3L9 86 aa8.8□□□□□ -1
Bdnf-205ENSMUST00000111045 Pglyrp1O88593 182 aa8.8□□□□□ -1
Bdnf-205ENSMUST00000111045 Csmd1Q923L3 3564 aa8.8□□□□□ -1
Bdnf-205ENSMUST00000111045 Ighv5-8A0A075B676 92 aa8.8□□□□□ -1
Bdnf-205ENSMUST00000111045 3110018I06RikQ9CXS0 120 aa8.8□□□□□ -1
Bdnf-205ENSMUST00000111045 Ufsp1Q9CZP0 217 aa8.8□□□□□ -1
Bdnf-205ENSMUST00000111045 Znf580Q9DB38 172 aa8.8□□□□□ -1
Bdnf-205ENSMUST00000111045 Polr2kQ63871 58 aa8.8□□□□□ -1
Bdnf-205ENSMUST00000111045 Ighv1-64A0A075B5X3 117 aa8.79□□□□□ -1
Bdnf-205ENSMUST00000111045 P06328 117 aa8.79□□□□□ -1
Bdnf-205ENSMUST00000111045 Mrps21P58059 87 aa8.79□□□□□ -1
Bdnf-205ENSMUST00000111045 Reg3dQ9QUS9 175 aa8.79□□□□□ -1
Bdnf-205ENSMUST00000111045 Smg1Q8BKX6 3658 aaKnown RBP8.79□□□□□ -1
Bdnf-205ENSMUST00000111045 Ighv1-85A0A075B5Y6 117 aa8.79□□□□□ -1
Bdnf-205ENSMUST00000111045 Igkv8-16A0A0G2JDG9 121 aa8.79□□□□□ -1
Bdnf-205ENSMUST00000111045 B430305J03RikQ8BQQ8 176 aa8.79□□□□□ -1
Bdnf-205ENSMUST00000111045 Trav13-4-dv7A0A075B6C2 110 aa8.79□□□□□ -1
Bdnf-205ENSMUST00000111045 Igkv4-78A0A0A6YYE5 119 aa8.79□□□□□ -1
Bdnf-205ENSMUST00000111045 Ighv1-62-1A0A075B5U3 116 aa8.78□□□□□ -1
Bdnf-205ENSMUST00000111045 Ifitm6A0A1B0GS75 124 aa8.78□□□□□ -1
Bdnf-205ENSMUST00000111045 Cdk2ap2Q9CPY4 127 aa8.78□□□□□ -1
Bdnf-205ENSMUST00000111045 Q9CX25 107 aa8.78□□□□□ -1
Bdnf-205ENSMUST00000111045 Wisp2Q9Z0G4 251 aa8.78□□□□□ -1
Bdnf-205ENSMUST00000111045 Gm10647E9Q8X0 124 aa8.77□□□□□ -1.01
Bdnf-205ENSMUST00000111045 1700011M02RikB1AX35 88 aa8.77□□□□□ -1.01
Bdnf-205ENSMUST00000111045 Gm10401E9Q3K6 71 aa8.77□□□□□ -1.01
Bdnf-205ENSMUST00000111045 Pkd1l2Q7TN88 2461 aa8.76□□□□□ -1.01
Bdnf-205ENSMUST00000111045 Col5a1O88207 1838 aa8.76□□□□□ -1.01
Bdnf-205ENSMUST00000111045 CrygaP04345 174 aa8.75□□□□□ -1.01
Bdnf-205ENSMUST00000111045 Cox6b1P56391 86 aaKnown RBP8.75□□□□□ -1.01
Bdnf-205ENSMUST00000111045 Higd2aQ9CQJ1 106 aa8.75□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms