RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Insl3O09107 122 aa10.42□□□□□ -0.74
Nup88-202ENSMUST00000108530 Ighv1-72P01751 139 aa10.42□□□□□ -0.74
Nup88-202ENSMUST00000108530 Mpv17l2Q8VIK2 200 aa10.42□□□□□ -0.74
Nup88-202ENSMUST00000108530 Ighv1-5A0A0A6YWG2 117 aa10.41□□□□□ -0.74
Nup88-202ENSMUST00000108530 Defb10Q8R2I8 73 aa10.41□□□□□ -0.74
Nup88-202ENSMUST00000108530 Il1f10Q8R459 152 aa10.41□□□□□ -0.74
Nup88-202ENSMUST00000108530 Tmem101Q91VP7 257 aa10.41□□□□□ -0.74
Nup88-202ENSMUST00000108530 Dnah10D3YYQ8 4591 aa10.41□□□□□ -0.74
Nup88-202ENSMUST00000108530 Ighv1-49A0A0A6YWX2 117 aa10.41□□□□□ -0.74
Nup88-202ENSMUST00000108530 Ighv2-6-8A0A0A6YWY9 116 aa10.4□□□□□ -0.74
Nup88-202ENSMUST00000108530 Prp2P05143 317 aa10.4□□□□□ -0.74
Nup88-202ENSMUST00000108530 SrarpQ3ULG3 163 aa10.4□□□□□ -0.74
Nup88-202ENSMUST00000108530 LbhQ9CX60 105 aa10.4□□□□□ -0.74
Nup88-202ENSMUST00000108530 Plac1Q9JI83 173 aa10.4□□□□□ -0.74
Nup88-202ENSMUST00000108530 Gm9747Q810H1 104 aa10.4□□□□□ -0.74
Nup88-202ENSMUST00000108530 3110070M22RikQ9DAQ7 118 aa10.4□□□□□ -0.74
Nup88-202ENSMUST00000108530 E130114P18RikF6S0S7 154 aa10.39□□□□□ -0.75
Nup88-202ENSMUST00000108530 Sigmar1O55242 223 aa10.39□□□□□ -0.75
Nup88-202ENSMUST00000108530 LeprotO89013 131 aa10.39□□□□□ -0.75
Nup88-202ENSMUST00000108530 Gm904Q3V2L5 102 aa10.39□□□□□ -0.75
Nup88-202ENSMUST00000108530 Higd2aQ9CQJ1 106 aa10.39□□□□□ -0.75
Nup88-202ENSMUST00000108530 Pgpep1Q9ESW8 209 aa10.39□□□□□ -0.75
Nup88-202ENSMUST00000108530 Igkv4-72A0A0B4J1I4 117 aa10.38□□□□□ -0.75
Nup88-202ENSMUST00000108530 Vamp8O70404 101 aa10.38□□□□□ -0.75
Nup88-202ENSMUST00000108530 Gm10772F7AIG4 85 aa10.38□□□□□ -0.75
Nup88-202ENSMUST00000108530 Plac8l1Q08EJ0 177 aa10.38□□□□□ -0.75
Nup88-202ENSMUST00000108530 Igkv4-79A0A075B5L8 119 aa10.37□□□□□ -0.75
Nup88-202ENSMUST00000108530 Gm10542F6XDR3 90 aa10.37□□□□□ -0.75
Nup88-202ENSMUST00000108530 Defb45Q3V490 66 aa10.37□□□□□ -0.75
Nup88-202ENSMUST00000108530 Ifitm10Q8BR26 201 aa10.37□□□□□ -0.75
Nup88-202ENSMUST00000108530 Pcp4P63054 62 aa10.36□□□□□ -0.75
Nup88-202ENSMUST00000108530 Kmt2aP55200 3966 aa10.36□□□□□ -0.75
Nup88-202ENSMUST00000108530 Trav13d-1A0A075B606 110 aa10.36□□□□□ -0.75
Nup88-202ENSMUST00000108530 Gm28269A0A087WSG3 125 aa10.36□□□□□ -0.75
Nup88-202ENSMUST00000108530 Ccl25O35903 144 aa10.36□□□□□ -0.75
Nup88-202ENSMUST00000108530 CrygaP04345 174 aa10.36□□□□□ -0.75
Nup88-202ENSMUST00000108530 Cmc4Q61908 68 aa10.36□□□□□ -0.75
Nup88-202ENSMUST00000108530 Ighv1-59A0A0A6YXE0 117 aa10.35□□□□□ -0.75
Nup88-202ENSMUST00000108530 Dad1P61804 113 aa10.35□□□□□ -0.75
Nup88-202ENSMUST00000108530 Gm21748Q3UE70 102 aa10.35□□□□□ -0.75
Nup88-202ENSMUST00000108530 Eif4ebp1Q60876 117 aa10.35□□□□□ -0.75
Nup88-202ENSMUST00000108530 Ube2d1P61080 147 aaKnown RBP10.34□□□□□ -0.75
Nup88-202ENSMUST00000108530 RetnQ99P87 114 aa10.34□□□□□ -0.75
Nup88-202ENSMUST00000108530 Srsf9Q9D0B0 222 aaKnown RBP10.34□□□□□ -0.75
Nup88-202ENSMUST00000108530 Tomm7Q9D173 55 aa10.34□□□□□ -0.75
Nup88-202ENSMUST00000108530 Dnah6E9Q0B6 4144 aa10.34□□□□□ -0.75
Nup88-202ENSMUST00000108530 NrepQ07475 68 aa10.34□□□□□ -0.75
Nup88-202ENSMUST00000108530 Ppp1r32Q148A4 427 aa10.34□□□□□ -0.75
Nup88-202ENSMUST00000108530 Cfap126Q6P8X9 189 aa10.34□□□□□ -0.75
Nup88-202ENSMUST00000108530 Mfap4Q9D1H9 257 aa10.34□□□□□ -0.75
Nup88-202ENSMUST00000108530 Spry2Q9QXV8 315 aa10.34□□□□□ -0.75
Nup88-202ENSMUST00000108530 Igkv4-61A0A0G2JH00 117 aa10.33□□□□□ -0.76
Nup88-202ENSMUST00000108530 P01745 121 aa10.33□□□□□ -0.76
Nup88-202ENSMUST00000108530 Spink4O35679 86 aa10.33□□□□□ -0.76
Nup88-202ENSMUST00000108530 Phxr5P08399 672 aa10.33□□□□□ -0.76
Nup88-202ENSMUST00000108530 PrcdQ00LT2 53 aa10.33□□□□□ -0.76
Nup88-202ENSMUST00000108530 Cdc42se2Q8BGH7 84 aa10.33□□□□□ -0.76
Nup88-202ENSMUST00000108530 Igkv4-53A0A0G2JFC6 119 aa10.32□□□□□ -0.76
Nup88-202ENSMUST00000108530 P01811 117 aa10.32□□□□□ -0.76
Nup88-202ENSMUST00000108530 Foxc1Q61572 553 aa10.32□□□□□ -0.76
Nup88-202ENSMUST00000108530 Gm10295Q8CCF3 114 aa10.32□□□□□ -0.76
Nup88-202ENSMUST00000108530 Tspan13Q9D8C2 204 aa10.32□□□□□ -0.76
Nup88-202ENSMUST00000108530 Gm20730A0A075B5J6 119 aa10.31□□□□□ -0.76
Nup88-202ENSMUST00000108530 Gm35549A0A0N4SUS7 141 aa10.31□□□□□ -0.76
Nup88-202ENSMUST00000108530 Triap1Q9D8Z2 76 aa10.31□□□□□ -0.76
Nup88-202ENSMUST00000108530 Vmo1Q5SXG7 201 aa10.31□□□□□ -0.76
Nup88-202ENSMUST00000108530 Rbmy1bQ60990 380 aa10.31□□□□□ -0.76
Nup88-202ENSMUST00000108530 Fgf23Q9EPC2 251 aa10.3□□□□□ -0.76
Nup88-202ENSMUST00000108530 Gm45717A0A1B0GT68 152 aa10.3□□□□□ -0.76
Nup88-202ENSMUST00000108530 Tfpi2O35536 230 aa10.3□□□□□ -0.76
Nup88-202ENSMUST00000108530 Shisa2Q8QZV2 295 aa10.3□□□□□ -0.76
Nup88-202ENSMUST00000108530 Rab37Q9JKM7 223 aa10.3□□□□□ -0.76
Nup88-202ENSMUST00000108530 Klk11Q9QYN3 276 aa10.3□□□□□ -0.76
Nup88-202ENSMUST00000108530 Atp6v0e2Q91XE7 81 aa10.29□□□□□ -0.76
Nup88-202ENSMUST00000108530 2310009B15RikA0A0A6YWI4 143 aa10.28□□□□□ -0.76
Nup88-202ENSMUST00000108530 Lect2O88803 151 aa10.28□□□□□ -0.76
Nup88-202ENSMUST00000108530 Atp5g3P56384 141 aa10.28□□□□□ -0.76
Nup88-202ENSMUST00000108530 BC106179Q8C9L1 186 aa10.28□□□□□ -0.76
Nup88-202ENSMUST00000108530 Atp5g1Q9CR84 136 aa10.28□□□□□ -0.76
Nup88-202ENSMUST00000108530 BC048562Q80ZQ7 204 aa10.28□□□□□ -0.76
Nup88-202ENSMUST00000108530 Cox8cA6H666 72 aa10.27□□□□□ -0.77
Nup88-202ENSMUST00000108530 Trav3-1Q5R1I8 114 aa10.27□□□□□ -0.77
Nup88-202ENSMUST00000108530 Gemin7Q9CWY4 129 aa10.27□□□□□ -0.77
Nup88-202ENSMUST00000108530 Spata3Q9D9T6 193 aa10.27□□□□□ -0.77
Nup88-202ENSMUST00000108530 Dpm2Q9Z324 84 aa10.27□□□□□ -0.77
Nup88-202ENSMUST00000108530 Dnah14A0A140LIJ4 4489 aa10.27□□□□□ -0.77
Nup88-202ENSMUST00000108530 Prh1P05142 261 aa10.26□□□□□ -0.77
Nup88-202ENSMUST00000108530 Spata45Q9CVW4 97 aa10.26□□□□□ -0.77
Nup88-202ENSMUST00000108530 Trbv13-2A0A140T8N6 113 aa10.26□□□□□ -0.77
Nup88-202ENSMUST00000108530 CckP09240 115 aa10.26□□□□□ -0.77
Nup88-202ENSMUST00000108530 Rmi2Q3UPE3 149 aa10.26□□□□□ -0.77
Nup88-202ENSMUST00000108530 C920008G01RikA0A0B4J1N1 112 aa10.25□□□□□ -0.77
Nup88-202ENSMUST00000108530 Gm43218A0A0G2JGT0 114 aa10.25□□□□□ -0.77
Nup88-202ENSMUST00000108530 Zc2hc1bQ9D534 172 aa10.25□□□□□ -0.77
Nup88-202ENSMUST00000108530 Trav13-4-dv7A0A075B6C2 110 aa10.25□□□□□ -0.77
Nup88-202ENSMUST00000108530 Trav4n-4A0A075B615 110 aa10.24□□□□□ -0.77
Nup88-202ENSMUST00000108530 P01896 185 aa10.24□□□□□ -0.77
Nup88-202ENSMUST00000108530 Tm2d2Q8R0I4 213 aa10.24□□□□□ -0.77
Nup88-202ENSMUST00000108530 Cryba4Q9JJV0 196 aa10.24□□□□□ -0.77
Nup88-202ENSMUST00000108530 P01823 113 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms