RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 Tmem97Q8VD00 176 aa13.15□□□□□ -0.3
Ttc39a-203ENSMUST00000106619 Scgb1b19F6WYW0 93 aa13.15□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Ndufa1O35683 70 aa13.15□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 P0C913 63 aa13.15□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Cox11Q6P8I6 275 aa13.15□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Sec11aQ9R0P6 179 aa13.15□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Pkd1l1Q8R526 2615 aa13.14□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Gm10542F6XDR3 90 aa13.13□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Fam240aJ3QNP9 97 aa13.13□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 P01837 106 aa13.13□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Tm4sf20Q9CQY8 226 aa13.13□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Gm12057A0A087WR21 115 aa13.12□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Defa30E9QPZ2 93 aa13.12□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Defa6P50704 93 aa13.12□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Ssbp1Q9CYR0 152 aaKnown RBP13.12□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Huwe1Q7TMY8 4377 aaKnown RBP13.11□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Muc6Q80T03 2850 aa13.11□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Foxi2Q3I5G5 311 aa13.1□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Gm11444F6QMA6 170 aa13.09□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 CrxO54751 299 aa13.09□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Cfap126Q6P8X9 189 aa13.09□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Gatd1Q8BFQ8 220 aa13.09□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 2010109I03RikQ9CQ11 111 aa13.09□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Csmd3Q80T79 3707 aa13.09□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Gm45717A0A1B0GT68 152 aa13.09□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Gm9508A0A1W2P7W0 230 aa13.09□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 E130208F15RikQ3UPV3 143 aa13.09□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 PemtQ61907 199 aa13.09□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Gm4861Q8C5A4 106 aa13.09□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Tmem223Q9CQE2 199 aaKnown RBP13.09□□□□□ -0.31
Ttc39a-203ENSMUST00000106619 Trav7-6A0A075B640 112 aa13.08□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Trav8-1A0A075B641 109 aa13.08□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Prp2P05143 317 aa13.08□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Cks1brtQ3UNC9 96 aa13.08□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 PolP10400 120 aa13.07□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Trav3-3Q5R1C3 114 aa13.07□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Reg3bP35230 175 aa13.07□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Cd33Q63994 403 aa13.07□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 PpdpfQ9CR37 115 aa13.07□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Ccl17F6R5P4 103 aa13.06□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Pcp4l1Q6W8Q3 68 aa13.06□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Rbm7Q9CQT2 265 aaKnown RBP13.06□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Dnah1E9Q8T7 4250 aa13.05□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Igkv3-1A0A075B5P1 119 aa13.05□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Gm17509Q9CZ61 145 aa13.05□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 HilpdaQ9JLS0 64 aa13.05□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Hbb-bsA8DUK4 147 aa13.04□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Hbb-b1P02088 147 aa13.04□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Defa2P28309 93 aa13.04□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 RetnQ99P87 114 aa13.04□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Gnb1lQ9EQ15 326 aa13.04□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Dync2h1Q45VK7 4306 aa13.04□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Igkv6-13A0A0G2JGY3 119 aa13.04□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 9430069I07RikQ9CX21 111 aa13.03□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Gm4064A0A087WR82 380 aa13.02□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Gm10352B2RWR6 380 aa13.02□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Rbmy1a1O35698 380 aa13.02□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Rbmy1bQ60990 380 aa13.02□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Sprr1bQ62267 153 aa13.02□□□□□ -0.32
Ttc39a-203ENSMUST00000106619 Tenm2Q9WTS5 2764 aa13.02□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Gm10251J3QPM5 127 aa13.02□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 EnhoQ8K1D8 76 aa13.02□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Ighv2-9-1A0A075B697 116 aa13.01□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Gm42674D3YUT9 64 aa13.01□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Tspo2Q9CRZ8 162 aa13.01□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Ss18l2Q9D174 77 aa13.01□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Plac1Q9JI83 173 aa13□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Stab2Q8R4U0 2559 aa13□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Prh1P05142 261 aa12.99□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Fgf6P21658 208 aa12.99□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Mfap4Q9D1H9 257 aa12.99□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Ighv1-62-1A0A075B5U3 116 aa12.99□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Trav13-4-dv7A0A075B6C2 110 aa12.99□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 SrarpQ3ULG3 163 aa12.99□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Fgf23Q9EPC2 251 aa12.98□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 FasnP19096 2504 aaKnown RBP12.97□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Trav13d-4A0A0G2JFX3 110 aa12.97□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 P01823 113 aa12.97□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Dnah7bL7N1Y0 4068 aa12.97□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 PrkdcP97313 4128 aa12.97□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Krtap11-1E9Q2E9 183 aa12.97□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Gm10295Q8CCF3 114 aa12.97□□□□□ -0.33
Ttc39a-203ENSMUST00000106619 Trav4n-4A0A075B615 110 aa12.96□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Trav9n-4A0A075B631 113 aa12.96□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Hsbp1l1B2RXB2 72 aa12.95□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Prelid3aQ8VE85 172 aa12.95□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Zfand2aQ9JII7 171 aa12.95□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Gm11213A0A1B0GR83 88 aa12.94□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 2310061N02RikQ9D6S9 174 aa12.94□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Gm44965A0A0N4SVR3 59 aa12.94□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Scgb1b11A0A087WQJ0 93 aa12.93□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Trav11A0A0B4J1J9 114 aa12.93□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Gm9242J3QNY1 357 aa12.93□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Insl3O09107 122 aa12.93□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Smim1P0C8K7 78 aa12.93□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Hnrnpa3Q8BG05 379 aaKnown RBP12.93□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Bsph2Q0Q236 131 aa12.92□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Dpm2Q9Z324 84 aa12.92□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Gm20730A0A075B5J6 119 aa12.91□□□□□ -0.34
Ttc39a-203ENSMUST00000106619 Gm45753A0A1C7CYU8 86 aa12.91□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 70.9 ms