RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Prss58Q8BW11 241 aa7.76□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 SpinklQ8CEK3 90 aa7.76□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 1700012A03RikQ9DAF1 130 aa7.76□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 Trav14-2A0A075B694 121 aa7.75□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 Ormdl2Q9CQZ0 153 aa7.75□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 MNCb-2875Q9DCB3 74 aa7.75□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 Trav9n-4A0A075B631 113 aa7.74□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 Rpl36-ps4A0A140T8U4 117 aa7.74□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 Gm9242J3QNY1 357 aa7.74□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 Fam19a4Q7TPG5 135 aa7.74□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 Rab5aQ9CQD1 215 aa7.74□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 Srsf9Q9D0B0 222 aaKnown RBP7.74□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 Sprr4Q8CGN8 76 aa7.73□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 SvbpQ99LQ4 66 aa7.73□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 Atg101Q9D8Z6 218 aa7.73□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 3110070M22RikQ9DAQ7 118 aa7.73□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 SstP60041 116 aa7.72□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 Ube2wQ8VDW4 151 aa7.72□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 SnapinQ9Z266 136 aa7.72□□□□□ -1.17
Ccdc28a-202ENSMUST00000080860 Bloc1s1O55102 125 aa7.71□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 P01896 185 aa7.71□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 TbpP29037 316 aa7.71□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Defa9P50707 93 aa7.71□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Ube2d1P61080 147 aaKnown RBP7.71□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Shisal1Q0VBP7 198 aa7.71□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Znf414Q9DCK4 299 aa7.71□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Ino80eA0A0U1RP99 260 aa7.7□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Gm11555B1AQ89 175 aa7.7□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 PkigO70139 76 aa7.7□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Prp2P05143 317 aa7.7□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Fgf6P21658 208 aa7.7□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Defa10P50708 93 aa7.7□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Timm17aQ9Z0V8 171 aa7.7□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Trdv2-1A0A0G2JGB9 116 aa7.69□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Tmem238lA0A1B0GS74 79 aa7.69□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Gm45623A0A1B0GSF6 103 aa7.69□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Scgb1b29D2XZ31 93 aa7.69□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Scgb1b20E9PWZ2 93 aa7.69□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Rab24P35290 203 aa7.69□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Gm10735Q3US96 136 aa7.69□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 9130213A22RikQ3V3T2 120 aa7.69□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 1600014C23RikQ9DAX4 101 aa7.69□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Fabp4P04117 132 aa7.68□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Tmem136Q3TYE7 245 aa7.68□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Smim7Q5RKS2 75 aa7.68□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Ifitm10Q8BR26 201 aa7.68□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Mrpl32Q9DCI9 187 aaKnown RBP7.68□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Lrp2A2ARV4 4660 aa7.68□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Ighv1-56A0A0A6YXG2 117 aa7.67□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Cox8cA6H666 72 aa7.67□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Scgb2a2J3KMP9 96 aa7.67□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 SeboxP70368 190 aa7.67□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Ramp1Q9WTJ5 148 aa7.67□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Zfp930A0A1D5RM15 441 aa7.66□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Gm5426J3QNM7 103 aa7.66□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Arl14eplQ3UKZ7 152 aa7.66□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Higd1aQ9JLR9 95 aa7.66□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Gm18596A0A1W2P860 280 aa7.65□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Sertad4A7DTG3 377 aa7.65□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Gm10542F6XDR3 90 aa7.65□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Ceacam12Q3UKP4 300 aa7.65□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Tmem97Q8VD00 176 aa7.65□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 Urm1Q9D2P4 101 aa7.65□□□□□ -1.18
Ccdc28a-202ENSMUST00000080860 A730009L09RikA0A1B0GS82 72 aa7.64□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Bsph2Q0Q236 131 aa7.64□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Q3UNZ8 350 aa7.64□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 SycnQ8VCK7 134 aa7.64□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Ss18l2Q9D174 77 aa7.64□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Zcchc13Q9D548 170 aa7.64□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Sec11aQ9R0P6 179 aa7.64□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Trav13d-4A0A0G2JFX3 110 aa7.63□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 P18527 97 aa7.63□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 BC106179Q8C9L1 186 aa7.63□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Fam25cQ8CF02 89 aa7.63□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Mfap4Q9D1H9 257 aa7.63□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Cox7b2Q9D2H1 82 aa7.63□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Fam241bQ9D882 120 aa7.63□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Zfand2aQ9JII7 171 aa7.63□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Igkv3-2A0A075B5P0 119 aa7.62□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Gm11627A6PWP4 55 aa7.61□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Gm17577J3QNF7 156 aa7.61□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Vpreb2P13373 142 aa7.61□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Gm1968Q3T9I3 115 aa7.61□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Pou2af1Q64693 256 aa7.61□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Leprotl1Q9CQ74 131 aa7.61□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 OtorQ9JIE3 128 aa7.61□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Defa23Q5G866 93 aa7.6□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Trav13-4-dv7A0A075B6C2 110 aa7.59□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Gm45521A0A1B0GRK0 198 aa7.59□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Gm10518F6UQQ9 182 aa7.59□□□□□ -1.19
Ccdc28a-202ENSMUST00000080860 Aqp7O54794 303 aa7.58□□□□□ -1.2
Ccdc28a-202ENSMUST00000080860 Rpl37aP61514 92 aa7.58□□□□□ -1.2
Ccdc28a-202ENSMUST00000080860 Camk2n2Q78WH7 79 aa7.58□□□□□ -1.2
Ccdc28a-202ENSMUST00000080860 Ankrd39Q9D2X0 183 aa7.58□□□□□ -1.2
Ccdc28a-202ENSMUST00000080860 Hrct1Q9D6B9 109 aa7.58□□□□□ -1.2
Ccdc28a-202ENSMUST00000080860 Gm6793B2RXM2 351 aa7.57□□□□□ -1.2
Ccdc28a-202ENSMUST00000080860 Krtap14O08640 167 aa7.57□□□□□ -1.2
Ccdc28a-202ENSMUST00000080860 Rab5bP61021 215 aa7.57□□□□□ -1.2
Ccdc28a-202ENSMUST00000080860 Hnrnpa3Q8BG05 379 aaKnown RBP7.57□□□□□ -1.2
Ccdc28a-202ENSMUST00000080860 Pttg1Q9CQJ7 199 aa7.57□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 70.3 ms