RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Ighv1-62-1A0A075B5U3 116 aa14.02□□□□□ -0.16
Ccdc34-201ENSMUST00000028580 Q9DAQ5 155 aa14.01□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 C2cd3Q52KB6 2323 aa14□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 Spata45Q9CVW4 97 aa14□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 9430069I07RikQ9CX21 111 aa14□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 Tnfrsf23Q9ER63 176 aa14□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 Gm11444F6QMA6 170 aa13.99□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 Gpha2Q925Q5 128 aa13.99□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 Gm29423A0A087WRM1 55 aa13.99□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 Gm9513B3GLJ6 99 aa13.99□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 4930546C10RikE9Q4Y3 121 aa13.99□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 Cops9Q3U898 57 aa13.99□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 Nf1Q04690 2841 aa13.98□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 Cox6cQ9CPQ1 76 aa13.97□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 P01745 121 aa13.97□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 Gm10772F7AIG4 85 aa13.96□□□□□ -0.17
Ccdc34-201ENSMUST00000028580 Gm10577Q3UDV9 132 aa13.95□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Eif4ebp3Q80VV3 101 aa13.95□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Crlf1Q9JM58 425 aa13.95□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Krtap16-1A2A5X5 502 aa13.95□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Rpl35aO55142 110 aa13.95□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Spink1P09036 80 aa13.95□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Ndufa3Q9CQ91 84 aa13.94□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Sostdc1Q9CQN4 206 aa13.94□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Trav9d-3A0A075B695 113 aa13.94□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Trav13n-1A0A0G2JEU8 110 aa13.94□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Dmbt1Q60997 2085 aa13.94□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 GfyJ3KML8 504 aa13.93□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Smrp1Q2MH31 260 aa13.93□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Ube2wQ8VDW4 151 aa13.93□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Gm43218A0A0G2JGT0 114 aa13.92□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Scgb1b24B1B0N6 92 aa13.92□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Rif1Q6PR54 2419 aaKnown RBP13.92□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Igkv4-72A0A0B4J1I4 117 aa13.92□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 P01896 185 aa13.92□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Chd9Q8BYH8 2885 aa13.92□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 BsnO88737 3942 aa13.91□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Gm11020F6ZGD5 61 aa13.91□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Atp5g3P56384 141 aa13.91□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Ppp1r32Q148A4 427 aa13.91□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 MobpQ9D2P8 170 aa13.91□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Tenm3Q9WTS6 2715 aa13.9□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 1700020N15RikL7MTX3 112 aa13.9□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Ly6c2P0CW03 131 aa13.9□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 Ly6hQ9WUC3 139 aa13.9□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 CubnQ9JLB4 3623 aa13.9□□□□□ -0.18
Ccdc34-201ENSMUST00000028580 2310009B15RikA0A0A6YWI4 143 aa13.89□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Tmem213Q08EA8 116 aa13.89□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Cks1bP61025 79 aa13.89□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Phpt1Q9DAK9 124 aa13.89□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Trav7-6A0A075B640 112 aa13.88□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Ighv1-49A0A0A6YWX2 117 aa13.88□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 1700011M02RikB1AX35 88 aa13.88□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 RetnQ99P87 114 aa13.87□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Gm9767G3X930 207 aa13.87□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Cox7a1P56392 80 aa13.87□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Lst1O08843 95 aa13.86□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Pcp4P63054 62 aa13.86□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Anapc13Q8R034 74 aa13.86□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Lage3Q9CR70 148 aa13.86□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Notch3Q61982 2318 aa13.86□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 MrapQ9D159 127 aa13.86□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Zfand2aQ9JII7 171 aa13.86□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Spink4O35679 86 aa13.85□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Gm10549Q3URY4 149 aa13.85□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Gm4861Q8C5A4 106 aa13.85□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Xirp2Q4U4S6 3784 aa13.85□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 Trav11A0A0B4J1J9 114 aa13.84□□□□□ -0.19
Ccdc34-201ENSMUST00000028580 SpinklQ8CEK3 90 aa13.83□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Ss18l2Q9D174 77 aa13.83□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Epg5Q80TA9 2572 aa13.83□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 MalO09198 153 aa13.83□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Gm10767Q3TQP0 103 aa13.83□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Defb50Q6TU36 73 aa13.83□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Trav13-4-dv7A0A075B6C2 110 aa13.82□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Pla2g1bQ9Z0Y2 146 aa13.82□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Nhlrc1Q8BR37 401 aa13.81□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Lyrm7Q9DA03 104 aa13.81□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Trav9d-4A0A0G2JG37 103 aa13.8□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Krtap24-1G3X9A2 248 aa13.8□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 SelenowP63300 88 aa13.8□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Psors1c2Q80ZC9 134 aa13.8□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Helz2E9QAM5 2947 aaKnown RBP13.8□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Sh2d1aO88890 126 aa13.79□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 PemtQ61907 199 aa13.79□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Atp5g1Q9CR84 136 aa13.79□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Zfp951A0A087WRH0 451 aa13.79□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Wdr38Q9D994 303 aa13.79□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Tm2d2Q8R0I4 213 aa13.78□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Xlr5cQ9JJR2 179 aa13.78□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Cep192E9Q4Y4 2514 aaKnown RBP13.78□□□□□ -0.2
Ccdc34-201ENSMUST00000028580 Rpl28P41105 137 aaKnown RBP13.77□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 MtorQ9JLN9 2549 aa13.77□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Myo18bE9PV66 2605 aa13.77□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Ighv2-9-1A0A075B697 116 aa13.76□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Usp9yF8VPU6 2556 aa13.76□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Prp2P05143 317 aa13.76□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Gm7257D3YX25 99 aa13.75□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 Odf3l2Q3TZ65 277 aa13.75□□□□□ -0.21
Ccdc34-201ENSMUST00000028580 SbsponQ3UPR9 264 aa13.75□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms