RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Timm17bQ9Z0V7 172 aa10.73□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 TrrapQ80YV3 2565 aaKnown RBP10.73□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 4930432M17RikQ3V0W9 174 aa10.73□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Q9DAQ5 155 aa10.73□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Usp9yF8VPU6 2556 aa10.73□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Trav4d-3A0A075B625 110 aa10.72□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Cryba4Q9JJV0 196 aa10.72□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Shisa2Q8QZV2 295 aa10.71□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 RetnQ99P87 114 aa10.71□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Mast4Q811L6 2618 aa10.71□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Trav13n-1A0A0G2JEU8 110 aa10.71□□□□□ -0.69
Nkx3-1-201ENSMUST00000022646 Trav9d-3A0A075B695 113 aa10.71□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Cd99Q8VCN6 175 aa10.71□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Plac8l1Q08EJ0 177 aa10.7□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Morn3Q8C5T4 241 aa10.7□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Crlf1Q9JM58 425 aa10.7□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 CirbpP60824 172 aaKnown RBP10.69□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Cdc42se2Q8BGH7 84 aa10.69□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Spata45Q9CVW4 97 aa10.69□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Epg5Q80TA9 2572 aa10.69□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Eif4ebp3Q80VV3 101 aa10.69□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Gm4861Q8C5A4 106 aa10.69□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Prp2P05143 317 aa10.68□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 CenpwQ3URR0 86 aa10.68□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Cep192E9Q4Y4 2514 aaKnown RBP10.68□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Ighv1-62-1A0A075B5U3 116 aa10.68□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Tfpi2O35536 230 aa10.68□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 P01745 121 aa10.68□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Lyrm9Q3UN90 78 aa10.68□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 1700010B08RikQ9DAI7 102 aa10.68□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Atp5g3P56384 141 aa10.67□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Il19Q8CJ70 176 aa10.67□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Chchd7Q8K2Q5 85 aa10.67□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 NipblQ6KCD5 2798 aaKnown RBP10.66□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 CrygaP04345 174 aa10.66□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Zfp462B1AWL2 2495 aaKnown RBP10.66□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Gm7257D3YX25 99 aa10.66□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Ighv1-61P01749 117 aa10.66□□□□□ -0.7
Nkx3-1-201ENSMUST00000022646 Trav7-6A0A075B640 112 aa10.65□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Ighv1-49A0A0A6YWX2 117 aa10.65□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Cox7a1P56392 80 aa10.65□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Sostdc1Q9CQN4 206 aa10.65□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Sh2d1aO88890 126 aa10.64□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Gpha2Q925Q5 128 aa10.63□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Ly6hQ9WUC3 139 aa10.63□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Ly6c2P0CW03 131 aa10.63□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Cox6cQ9CPQ1 76 aa10.63□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Krtap16-1A2A5X5 502 aa10.63□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Trav13-4-dv7A0A075B6C2 110 aa10.62□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 4930546C10RikE9Q4Y3 121 aa10.62□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Gm10772F7AIG4 85 aa10.62□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 1700020N15RikL7MTX3 112 aa10.62□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Cks1bP61025 79 aa10.62□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Ube2wQ8VDW4 151 aa10.62□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Ndufa3Q9CQ91 84 aa10.61□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Phpt1Q9DAK9 124 aa10.61□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Scgb1b24B1B0N6 92 aa10.61□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Anapc13Q8R034 74 aa10.61□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Gm9767G3X930 207 aa10.61□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 SpinklQ8CEK3 90 aa10.61□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 P01896 185 aa10.6□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Pcp4P63054 62 aa10.6□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Gm10767Q3TQP0 103 aa10.6□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Hspg2Q05793 3707 aaKnown RBP10.6□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Trav9d-4A0A0G2JG37 103 aa10.6□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 1700011M02RikB1AX35 88 aa10.6□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Atp5g1Q9CR84 136 aa10.6□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 9430069I07RikQ9CX21 111 aa10.6□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Myo18bE9PV66 2605 aa10.6□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Akap13E9Q394 2776 aa10.59□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Ppp1r32Q148A4 427 aa10.59□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Trav11A0A0B4J1J9 114 aa10.59□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 4930544G11RikQ9CR99 193 aa10.59□□□□□ -0.71
Nkx3-1-201ENSMUST00000022646 Lst1O08843 95 aa10.58□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 GfyJ3KML8 504 aa10.58□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Cops9Q3U898 57 aa10.58□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Pla2g1bQ9Z0Y2 146 aa10.57□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Smrp1Q2MH31 260 aa10.56□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Gm10577Q3UDV9 132 aa10.56□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Znf740Q6NZQ6 180 aa10.56□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Tomm7Q9D173 55 aa10.56□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 MobpQ9D2P8 170 aa10.56□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Igkv4-72A0A0B4J1I4 117 aa10.55□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 SelenowP63300 88 aa10.55□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Lyrm7Q9DA03 104 aa10.55□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Gm3250E9Q1M3 230 aa10.54□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 MalO09198 153 aa10.54□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Setd2E9Q5F9 2537 aa10.54□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Krtap24-1G3X9A2 248 aa10.54□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Trav13d-4A0A0G2JFX3 110 aa10.53□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Wdr38Q9D994 303 aa10.53□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Pfn2Q9JJV2 140 aa10.53□□□□□ -0.72
Nkx3-1-201ENSMUST00000022646 Erdr1J3QMM0 206 aa10.52□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Zfand2aQ9JII7 171 aa10.52□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Xlr5cQ9JJR2 179 aa10.52□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 PemtQ61907 199 aa10.52□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Lage3Q9CR70 148 aa10.52□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Gm10647E9Q8X0 124 aa10.51□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 C2cd3Q52KB6 2323 aa10.51□□□□□ -0.73
Nkx3-1-201ENSMUST00000022646 Defb50Q6TU36 73 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 9.2 ms