RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Timm17bQ9Z0V7 172 aa13.59□□□□□ -0.23
Ubp1-201ENSMUST00000009885 Gm17472A0A075B683 117 aa13.58□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Trav4-3A0A0B4J1K1 110 aa13.58□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Klk1b4P00757 256 aa13.58□□□□□ -0.24
Ubp1-201ENSMUST00000009885 AI854703Q8BIN3 203 aa13.58□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Gm21994F6T2D2 329 aa13.57□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Ighv8-11A0A075B5X4 119 aa13.57□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Defa23Q5G866 93 aa13.57□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Ighv5-9-1A0A0A6YVS4 126 aa13.57□□□□□ -0.24
Ubp1-201ENSMUST00000009885 P01786 117 aa13.57□□□□□ -0.24
Ubp1-201ENSMUST00000009885 C2cd3Q52KB6 2323 aa13.57□□□□□ -0.24
Ubp1-201ENSMUST00000009885 SbsponQ3UPR9 264 aa13.56□□□□□ -0.24
Ubp1-201ENSMUST00000009885 FshbQ60687 130 aa13.56□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Itpr1P11881 2749 aa13.56□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Ighv1-58A0A075B5W9 117 aa13.56□□□□□ -0.24
Ubp1-201ENSMUST00000009885 4930470P17RikQ9D542 155 aa13.56□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Ighv1-49A0A0A6YWX2 117 aa13.55□□□□□ -0.24
Ubp1-201ENSMUST00000009885 B230359F08RikA0A0B4J1K3 109 aa13.55□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Trbv30A0A0B4J1P1 111 aa13.55□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Trav13n-2A0A0G2JF93 110 aa13.54□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Smim26Q3V460 107 aa13.54□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Trav9d-3A0A075B695 113 aa13.54□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Pla2g2aP31482 146 aa13.54□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Gm16381A0A1Y7VKT9 73 aa13.54□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Shisa2Q8QZV2 295 aa13.54□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Cox17P56394 63 aa13.53□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Fgf23Q9EPC2 251 aa13.53□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Ighv1-63A0A075B5X2 117 aa13.53□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Tmem243B2RVB9 118 aa13.53□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Igkv4-79A0A075B5L8 119 aa13.53□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Ighv1-62-1A0A075B5U3 116 aa13.53□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Tomm7Q9D173 55 aa13.53□□□□□ -0.24
Ubp1-201ENSMUST00000009885 Igfn1Q3KNY0 2849 aa13.52□□□□□ -0.24
Ubp1-201ENSMUST00000009885 1700011M02RikB1AX35 88 aa13.52□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Gm10226O88253 85 aa13.52□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Znf580Q9DB38 172 aa13.52□□□□□ -0.25
Ubp1-201ENSMUST00000009885 P01729 129 aa13.52□□□□□ -0.25
Ubp1-201ENSMUST00000009885 NbeaQ9EPN1 2936 aa13.51□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Taf15Q8BQ46 557 aaKnown RBP13.51□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Lage3Q9CR70 148 aa13.51□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Cmya5Q70KF4 3739 aa13.51□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Sostdc1Q9CQN4 206 aa13.51□□□□□ -0.25
Ubp1-201ENSMUST00000009885 4930535I16RikQ9CUI2 172 aa13.51□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Cd164l2Q9D6W7 172 aa13.51□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Gm10509O88255 85 aa13.5□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Nbeal1E9PYP2 2688 aa13.49□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Gm10647E9Q8X0 124 aa13.49□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Trav13-1A0A075B644 110 aa13.49□□□□□ -0.25
Ubp1-201ENSMUST00000009885 P06329 120 aa13.48□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Hivep3A2A884 2348 aa13.48□□□□□ -0.25
Ubp1-201ENSMUST00000009885 MplkipQ9D011 178 aa13.48□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Dand5Q76LW6 185 aa13.48□□□□□ -0.25
Ubp1-201ENSMUST00000009885 MtorQ9JLN9 2549 aa13.47□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Krtap27-1E9PX37 202 aa13.47□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Gm10300Q8C8P7 189 aa13.47□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Prh1P05142 261 aa13.47□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Fxyd5P97808 178 aa13.47□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Csdc2Q91YQ3 154 aa13.46□□□□□ -0.25
Ubp1-201ENSMUST00000009885 4930564D02RikQ9D4S4 103 aa13.46□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Crlf1Q9JM58 425 aa13.46□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Trav13d-4A0A0G2JFX3 110 aa13.46□□□□□ -0.25
Ubp1-201ENSMUST00000009885 Ighv1-61P01749 117 aa13.46□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Defa20Q45VN2 95 aa13.46□□□□□ -0.26
Ubp1-201ENSMUST00000009885 B230307C23RikQ8BLB2 64 aa13.45□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Nop10Q9CQS2 64 aa13.45□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Fhl2O70433 279 aa13.44□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Fgfbp3Q1HCM0 245 aa13.44□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Ubr5Q80TP3 2792 aa13.44□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Gm5089A1L3C8 106 aa13.43□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Gm10322F7D7I4 111 aa13.43□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Gm9195A0A140LHT4 2805 aa13.43□□□□□ -0.26
Ubp1-201ENSMUST00000009885 4930524J08RikQ9CUJ5 163 aa13.43□□□□□ -0.26
Ubp1-201ENSMUST00000009885 P01745 121 aa13.42□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Cox7a1P56392 80 aa13.42□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Spata25Q9DA57 226 aa13.42□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Rpl35aO55142 110 aa13.42□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Dmbt1Q60997 2085 aa13.41□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Mapk1ip1lQ8BH93 242 aa13.41□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Gm7075D3Z497 112 aa13.41□□□□□ -0.26
Ubp1-201ENSMUST00000009885 4930518I15RikQ3V2W7 57 aa13.41□□□□□ -0.26
Ubp1-201ENSMUST00000009885 ScxQ64124 207 aa13.4□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Igkv2-109A0A075B5K6 120 aa13.4□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Muc4Q8JZM8 3443 aa13.4□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Setd2E9Q5F9 2537 aa13.4□□□□□ -0.26
Ubp1-201ENSMUST00000009885 A930009A15RikG3UYI6 118 aa13.4□□□□□ -0.26
Ubp1-201ENSMUST00000009885 P01755 137 aa13.4□□□□□ -0.26
Ubp1-201ENSMUST00000009885 NrgnP60761 78 aa13.4□□□□□ -0.26
Ubp1-201ENSMUST00000009885 Samd13D3YUG0 102 aa13.39□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Igkv4-68A0A0B4J1I7 117 aa13.38□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Fam110dQ80X91 271 aa13.38□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Gm37988J3QM41 62 aa13.37□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Q99M08 65 aa13.37□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Rpl18aP62717 176 aaKnown RBP13.37□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Brk1Q91VR8 75 aa13.37□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Igkv1-117A0A140T8M0 119 aa13.36□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Trav13-2A0A075B649 110 aa13.35□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Cox6b1P56391 86 aaKnown RBP13.35□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Gm10577Q3UDV9 132 aa13.35□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Igkv4-53A0A0G2JFC6 119 aa13.35□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Acyp1P56376 99 aa13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 65.5 ms