RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Rhox8Q6VSS7 320 aa32,5■■■□□ 2,79
Ubp1-201ENSMUST00000009885 NischQ80TM9 1593 aa31,91■■■□□ 2,7
Ubp1-201ENSMUST00000009885 Rpgrip1Q9EPQ2 1331 aa31,48■■■□□ 2,63
Ubp1-201ENSMUST00000009885 Ehmt2Q9Z148 1263 aaKnown RBP31,14■■■□□ 2,58
Ubp1-201ENSMUST00000009885 Abcc9P70170 1546 aa30,61■■■□□ 2,49
Ubp1-201ENSMUST00000009885 Acin1Q9JIX8 1338 aaKnown RBP30,6■■■□□ 2,49
Ubp1-201ENSMUST00000009885 Ccdc180J3QNE4 1664 aa30,46■■■□□ 2,47
Ubp1-201ENSMUST00000009885 Rtl1Q7M732 1744 aa30,36■■■□□ 2,45
Ubp1-201ENSMUST00000009885 Pcgf6Q99NA9 353 aa30,16■■■□□ 2,42
Ubp1-201ENSMUST00000009885 Ccdc136Q3TVA9 1136 aa29,87■■■□□ 2,37
Ubp1-201ENSMUST00000009885 Abcc8B2RUS7 1588 aa29,74■■■□□ 2,35
Ubp1-201ENSMUST00000009885 Gm35339A0A140LHH9 1649 aa29,68■■■□□ 2,34
Ubp1-201ENSMUST00000009885 Supt5hO55201 1082 aaKnown RBP29,5■■■□□ 2,31
Ubp1-201ENSMUST00000009885 HrcG5E8J6 738 aa29,49■■■□□ 2,31
Ubp1-201ENSMUST00000009885 Trim41Q5NCC3 630 aa29,37■■■□□ 2,29
Ubp1-201ENSMUST00000009885 Zeb1Q64318 1117 aa29,35■■■□□ 2,29
Ubp1-201ENSMUST00000009885 Zcchc6Q5BLK4 1491 aaKnown RBP29,14■■■□□ 2,25
Ubp1-201ENSMUST00000009885 Dcaf1Q80TR8 1506 aa29,13■■■□□ 2,25
Ubp1-201ENSMUST00000009885 Neurod1Q60867 357 aa29,05■■■□□ 2,24
Ubp1-201ENSMUST00000009885 Las1lA2BE28 776 aaKnown RBP28,99■■■□□ 2,23
Ubp1-201ENSMUST00000009885 Gab3Q8BSM5 595 aa28,87■■■□□ 2,21
Ubp1-201ENSMUST00000009885 Cngb1E1AZ71 1325 aa28,82■■■□□ 2,2
Ubp1-201ENSMUST00000009885 Wdr66E9Q743 1299 aa28,59■■■□□ 2,17
Ubp1-201ENSMUST00000009885 NefmP08553 848 aa28,51■■■□□ 2,15
Ubp1-201ENSMUST00000009885 Sall2Q9QX96 1004 aa28,4■■■□□ 2,14
Ubp1-201ENSMUST00000009885 Mier1Q5UAK0 511 aa28,35■■■□□ 2,13
Ubp1-201ENSMUST00000009885 Csrnp3P59055 597 aa28,27■■■□□ 2,12
Ubp1-201ENSMUST00000009885 Ppargc1bQ8VHJ7 1014 aa28,25■■■□□ 2,11
Ubp1-201ENSMUST00000009885 1700123L14RikQ3V2K7 440 aa28,18■■■□□ 2,1
Ubp1-201ENSMUST00000009885 Cep164Q5DU05 1446 aa28,11■■■□□ 2,09
Ubp1-201ENSMUST00000009885 UbtfP25976 765 aaKnown RBP28,09■■■□□ 2,09
Ubp1-201ENSMUST00000009885 Anks4bQ8K3X6 423 aa28,05■■■□□ 2,08
Ubp1-201ENSMUST00000009885 Cdk11bP24788 784 aaKnown RBP28,04■■■□□ 2,08
Ubp1-201ENSMUST00000009885 Rb1cc1Q9ESK9 1588 aa28,04■■■□□ 2,08
Ubp1-201ENSMUST00000009885 Chic1Q8CBW7 227 aa28■■■□□ 2,07
Ubp1-201ENSMUST00000009885 CenpbP27790 599 aa27,97■■■□□ 2,07
Ubp1-201ENSMUST00000009885 Nop58Q6DFW4 536 aaKnown RBP27,95■■■□□ 2,07
Ubp1-201ENSMUST00000009885 Gm38655A0A286YDK6 273 aa27,92■■■□□ 2,06
Ubp1-201ENSMUST00000009885 Esf1Q3V1V3 845 aaKnown RBP27,78■■■□□ 2,04
Ubp1-201ENSMUST00000009885 Aebp2Q9Z248 504 aaKnown RBP27,75■■■□□ 2,03
Ubp1-201ENSMUST00000009885 Myt1lP97500 1187 aa27,66■■■□□ 2,02
Ubp1-201ENSMUST00000009885 Myt1Q8CFC2 1127 aa27,56■■■□□ 2
Ubp1-201ENSMUST00000009885 ClspnQ80YR7 1315 aa27,56■■■□□ 2
Ubp1-201ENSMUST00000009885 Aplp2Q06335 707 aa27,56■■■□□ 2
Ubp1-201ENSMUST00000009885 Baz1aO88379 1555 aa27,55■■■□□ 2
Ubp1-201ENSMUST00000009885 Rsf1E9PWW9 1441 aaKnown RBP27,52■■■□□ 2
Ubp1-201ENSMUST00000009885 TonslQ6NZL6 1363 aa27,37■■□□□ 1,97
Ubp1-201ENSMUST00000009885 Npm2Q80W85 207 aa27,24■■□□□ 1,95
Ubp1-201ENSMUST00000009885 Ccdc88bQ4QRL3 1481 aa27,19■■□□□ 1,94
Ubp1-201ENSMUST00000009885 Kdm5dQ62240 1548 aa27,14■■□□□ 1,93
Ubp1-201ENSMUST00000009885 Mapk8ip2Q9ERE9 830 aa27,12■■□□□ 1,93
Ubp1-201ENSMUST00000009885 DiexfQ8BTT6 772 aaKnown RBP27,12■■□□□ 1,93
Ubp1-201ENSMUST00000009885 ScribQ80U72 1612 aa27,07■■□□□ 1,92
Ubp1-201ENSMUST00000009885 Plekhg3Q4VAC9 1341 aa27,06■■□□□ 1,92
Ubp1-201ENSMUST00000009885 Ap3b1Q9Z1T1 1105 aa27,01■■□□□ 1,91
Ubp1-201ENSMUST00000009885 Fam71e1A1L3C1 212 aa26,99■■□□□ 1,91
Ubp1-201ENSMUST00000009885 SafbD3YXK2 937 aaKnown RBP26,98■■□□□ 1,91
Ubp1-201ENSMUST00000009885 Eid3Q3V124 375 aa26,98■■□□□ 1,91
Ubp1-201ENSMUST00000009885 Brd4Q9ESU6 1400 aaKnown RBP26,96■■□□□ 1,91
Ubp1-201ENSMUST00000009885 Tnnt3Q9QZ47 272 aa26,92■■□□□ 1,9
Ubp1-201ENSMUST00000009885 Golga3P55937 1487 aa26,89■■□□□ 1,9
Ubp1-201ENSMUST00000009885 Hnrnpul2Q00PI9 745 aaKnown RBP26,89■■□□□ 1,89
Ubp1-201ENSMUST00000009885 Smarca2Q6DIC0 1577 aa26,83■■□□□ 1,89
Ubp1-201ENSMUST00000009885 NacadQ5SWP3 1504 aa26,83■■□□□ 1,88
Ubp1-201ENSMUST00000009885 Slc24a1Q91WD8 1130 aa26,78■■□□□ 1,88
Ubp1-201ENSMUST00000009885 Bcl11aQ9QYE3 773 aa26,69■■□□□ 1,86
Ubp1-201ENSMUST00000009885 Clip1Q922J3 1391 aa26,63■■□□□ 1,85
Ubp1-201ENSMUST00000009885 NclP09405 707 aaKnown RBP26,62■■□□□ 1,85
Ubp1-201ENSMUST00000009885 Stra8P70278 393 aa26,59■■□□□ 1,85
Ubp1-201ENSMUST00000009885 Anp32aO35381 247 aa26,56■■□□□ 1,84
Ubp1-201ENSMUST00000009885 Pelp1Q9DBD5 1123 aaKnown RBP26,55■■□□□ 1,84
Ubp1-201ENSMUST00000009885 Cecr2E9Q2Z1 1453 aa26,5■■□□□ 1,83
Ubp1-201ENSMUST00000009885 Fam50aQ9WV03 339 aaKnown RBP26,49■■□□□ 1,83
Ubp1-201ENSMUST00000009885 Ttbk1Q6PCN3 1308 aa26,43■■□□□ 1,82
Ubp1-201ENSMUST00000009885 Ube2uB1AUC4 352 aa26,43■■□□□ 1,82
Ubp1-201ENSMUST00000009885 Crybg2B7ZCC2 1516 aa26,42■■□□□ 1,82
Ubp1-201ENSMUST00000009885 Eif5bQ05D44 1216 aaKnown RBP26,37■■□□□ 1,81
Ubp1-201ENSMUST00000009885 Il27Q8K3I6 234 aa26,36■■□□□ 1,81
Ubp1-201ENSMUST00000009885 Calr4Q3TQS0 420 aa26,31■■□□□ 1,8
Ubp1-201ENSMUST00000009885 Synj1Q8CHC4 1574 aa26,3■■□□□ 1,8
Ubp1-201ENSMUST00000009885 Cep162Q6ZQ06 1403 aa26,29■■□□□ 1,8
Ubp1-201ENSMUST00000009885 Ifnlr1Q8CGK5 535 aa26,19■■□□□ 1,78
Ubp1-201ENSMUST00000009885 Rapgef2Q8CHG7 1496 aa26,17■■□□□ 1,78
Ubp1-201ENSMUST00000009885 Rtl5Q5DTT4 599 aa26,14■■□□□ 1,77
Ubp1-201ENSMUST00000009885 Lmod2Q3UHZ5 550 aa26,13■■□□□ 1,77
Ubp1-201ENSMUST00000009885 Ppp4r2Q0VGB7 417 aa26,12■■□□□ 1,77
Ubp1-201ENSMUST00000009885 CftrP26361 1476 aa26,1■■□□□ 1,77
Ubp1-201ENSMUST00000009885 Nolc1E9Q5C9 702 aaKnown RBP26,1■■□□□ 1,77
Ubp1-201ENSMUST00000009885 Sycp2Q9CUU3 1500 aa26,1■■□□□ 1,77
Ubp1-201ENSMUST00000009885 PrkcshO08795 521 aa26,03■■□□□ 1,76
Ubp1-201ENSMUST00000009885 Znf710Q3U288 666 aa26■■□□□ 1,75
Ubp1-201ENSMUST00000009885 Wdr43Q6ZQL4 677 aaKnown RBP25,92■■□□□ 1,74
Ubp1-201ENSMUST00000009885 Supt16hQ920B9 1047 aa25,91■■□□□ 1,74
Ubp1-201ENSMUST00000009885 Setd5Q5XJV7 1441 aa25,91■■□□□ 1,74
Ubp1-201ENSMUST00000009885 Ncapd3Q6ZQK0 1506 aa25,9■■□□□ 1,74
Ubp1-201ENSMUST00000009885 P3h3Q8CG70 732 aa25,88■■□□□ 1,73
Ubp1-201ENSMUST00000009885 Fmn1Q05860 1466 aa25,87■■□□□ 1,73
Ubp1-201ENSMUST00000009885 BlmO88700 1416 aa25,86■■□□□ 1,73
Ubp1-201ENSMUST00000009885 Cc2d2aQ8CFW7 1633 aa25,86■■□□□ 1,73
Ubp1-201ENSMUST00000009885 Hspa5P20029 655 aaKnown RBP25,86■■□□□ 1,73
Retrieved 100 of 22,080 RNA–protein pairs in 66,5 ms