RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Rhox8Q6VSS7 320 aa32.5■■■□□ 2.79
Ubp1-201ENSMUST00000009885 NischQ80TM9 1593 aa31.91■■■□□ 2.7
Ubp1-201ENSMUST00000009885 Rpgrip1Q9EPQ2 1331 aa31.48■■■□□ 2.63
Ubp1-201ENSMUST00000009885 Ehmt2Q9Z148 1263 aaKnown RBP31.14■■■□□ 2.58
Ubp1-201ENSMUST00000009885 Abcc9P70170 1546 aa30.61■■■□□ 2.49
Ubp1-201ENSMUST00000009885 Acin1Q9JIX8 1338 aaKnown RBP30.6■■■□□ 2.49
Ubp1-201ENSMUST00000009885 Ccdc180J3QNE4 1664 aa30.46■■■□□ 2.47
Ubp1-201ENSMUST00000009885 Rtl1Q7M732 1744 aa30.36■■■□□ 2.45
Ubp1-201ENSMUST00000009885 Pcgf6Q99NA9 353 aa30.16■■■□□ 2.42
Ubp1-201ENSMUST00000009885 Ccdc136Q3TVA9 1136 aa29.87■■■□□ 2.37
Ubp1-201ENSMUST00000009885 Abcc8B2RUS7 1588 aa29.74■■■□□ 2.35
Ubp1-201ENSMUST00000009885 Gm35339A0A140LHH9 1649 aa29.68■■■□□ 2.34
Ubp1-201ENSMUST00000009885 Supt5hO55201 1082 aaKnown RBP29.5■■■□□ 2.31
Ubp1-201ENSMUST00000009885 HrcG5E8J6 738 aa29.49■■■□□ 2.31
Ubp1-201ENSMUST00000009885 Trim41Q5NCC3 630 aa29.37■■■□□ 2.29
Ubp1-201ENSMUST00000009885 Zeb1Q64318 1117 aa29.35■■■□□ 2.29
Ubp1-201ENSMUST00000009885 Zcchc6Q5BLK4 1491 aaKnown RBP29.14■■■□□ 2.25
Ubp1-201ENSMUST00000009885 Dcaf1Q80TR8 1506 aa29.13■■■□□ 2.25
Ubp1-201ENSMUST00000009885 Neurod1Q60867 357 aa29.05■■■□□ 2.24
Ubp1-201ENSMUST00000009885 Las1lA2BE28 776 aaKnown RBP28.99■■■□□ 2.23
Ubp1-201ENSMUST00000009885 Gab3Q8BSM5 595 aa28.87■■■□□ 2.21
Ubp1-201ENSMUST00000009885 Cngb1E1AZ71 1325 aa28.82■■■□□ 2.2
Ubp1-201ENSMUST00000009885 Wdr66E9Q743 1299 aa28.59■■■□□ 2.17
Ubp1-201ENSMUST00000009885 NefmP08553 848 aa28.51■■■□□ 2.15
Ubp1-201ENSMUST00000009885 Sall2Q9QX96 1004 aa28.4■■■□□ 2.14
Ubp1-201ENSMUST00000009885 Mier1Q5UAK0 511 aa28.35■■■□□ 2.13
Ubp1-201ENSMUST00000009885 Csrnp3P59055 597 aa28.27■■■□□ 2.12
Ubp1-201ENSMUST00000009885 Ppargc1bQ8VHJ7 1014 aa28.25■■■□□ 2.11
Ubp1-201ENSMUST00000009885 1700123L14RikQ3V2K7 440 aa28.18■■■□□ 2.1
Ubp1-201ENSMUST00000009885 Cep164Q5DU05 1446 aa28.11■■■□□ 2.09
Ubp1-201ENSMUST00000009885 UbtfP25976 765 aaKnown RBP28.09■■■□□ 2.09
Ubp1-201ENSMUST00000009885 Anks4bQ8K3X6 423 aa28.05■■■□□ 2.08
Ubp1-201ENSMUST00000009885 Cdk11bP24788 784 aaKnown RBP28.04■■■□□ 2.08
Ubp1-201ENSMUST00000009885 Rb1cc1Q9ESK9 1588 aa28.04■■■□□ 2.08
Ubp1-201ENSMUST00000009885 Chic1Q8CBW7 227 aa28■■■□□ 2.07
Ubp1-201ENSMUST00000009885 CenpbP27790 599 aa27.97■■■□□ 2.07
Ubp1-201ENSMUST00000009885 Nop58Q6DFW4 536 aaKnown RBP27.95■■■□□ 2.07
Ubp1-201ENSMUST00000009885 Gm38655A0A286YDK6 273 aa27.92■■■□□ 2.06
Ubp1-201ENSMUST00000009885 Esf1Q3V1V3 845 aaKnown RBP27.78■■■□□ 2.04
Ubp1-201ENSMUST00000009885 Aebp2Q9Z248 504 aaKnown RBP27.75■■■□□ 2.03
Ubp1-201ENSMUST00000009885 Myt1lP97500 1187 aa27.66■■■□□ 2.02
Ubp1-201ENSMUST00000009885 Myt1Q8CFC2 1127 aa27.56■■■□□ 2
Ubp1-201ENSMUST00000009885 ClspnQ80YR7 1315 aa27.56■■■□□ 2
Ubp1-201ENSMUST00000009885 Aplp2Q06335 707 aa27.56■■■□□ 2
Ubp1-201ENSMUST00000009885 Baz1aO88379 1555 aa27.55■■■□□ 2
Ubp1-201ENSMUST00000009885 Rsf1E9PWW9 1441 aaKnown RBP27.52■■■□□ 2
Ubp1-201ENSMUST00000009885 TonslQ6NZL6 1363 aa27.37■■□□□ 1.97
Ubp1-201ENSMUST00000009885 Npm2Q80W85 207 aa27.24■■□□□ 1.95
Ubp1-201ENSMUST00000009885 Ccdc88bQ4QRL3 1481 aa27.19■■□□□ 1.94
Ubp1-201ENSMUST00000009885 Kdm5dQ62240 1548 aa27.14■■□□□ 1.93
Ubp1-201ENSMUST00000009885 Mapk8ip2Q9ERE9 830 aa27.12■■□□□ 1.93
Ubp1-201ENSMUST00000009885 DiexfQ8BTT6 772 aaKnown RBP27.12■■□□□ 1.93
Ubp1-201ENSMUST00000009885 ScribQ80U72 1612 aa27.07■■□□□ 1.92
Ubp1-201ENSMUST00000009885 Plekhg3Q4VAC9 1341 aa27.06■■□□□ 1.92
Ubp1-201ENSMUST00000009885 Ap3b1Q9Z1T1 1105 aa27.01■■□□□ 1.91
Ubp1-201ENSMUST00000009885 Fam71e1A1L3C1 212 aa26.99■■□□□ 1.91
Ubp1-201ENSMUST00000009885 SafbD3YXK2 937 aaKnown RBP26.98■■□□□ 1.91
Ubp1-201ENSMUST00000009885 Eid3Q3V124 375 aa26.98■■□□□ 1.91
Ubp1-201ENSMUST00000009885 Brd4Q9ESU6 1400 aaKnown RBP26.96■■□□□ 1.91
Ubp1-201ENSMUST00000009885 Tnnt3Q9QZ47 272 aa26.92■■□□□ 1.9
Ubp1-201ENSMUST00000009885 Golga3P55937 1487 aa26.89■■□□□ 1.9
Ubp1-201ENSMUST00000009885 Hnrnpul2Q00PI9 745 aaKnown RBP26.89■■□□□ 1.89
Ubp1-201ENSMUST00000009885 Smarca2Q6DIC0 1577 aa26.83■■□□□ 1.89
Ubp1-201ENSMUST00000009885 NacadQ5SWP3 1504 aa26.83■■□□□ 1.88
Ubp1-201ENSMUST00000009885 Slc24a1Q91WD8 1130 aa26.78■■□□□ 1.88
Ubp1-201ENSMUST00000009885 Bcl11aQ9QYE3 773 aa26.69■■□□□ 1.86
Ubp1-201ENSMUST00000009885 Clip1Q922J3 1391 aa26.63■■□□□ 1.85
Ubp1-201ENSMUST00000009885 NclP09405 707 aaKnown RBP26.62■■□□□ 1.85
Ubp1-201ENSMUST00000009885 Stra8P70278 393 aa26.59■■□□□ 1.85
Ubp1-201ENSMUST00000009885 Anp32aO35381 247 aa26.56■■□□□ 1.84
Ubp1-201ENSMUST00000009885 Pelp1Q9DBD5 1123 aaKnown RBP26.55■■□□□ 1.84
Ubp1-201ENSMUST00000009885 Cecr2E9Q2Z1 1453 aa26.5■■□□□ 1.83
Ubp1-201ENSMUST00000009885 Fam50aQ9WV03 339 aaKnown RBP26.49■■□□□ 1.83
Ubp1-201ENSMUST00000009885 Ttbk1Q6PCN3 1308 aa26.43■■□□□ 1.82
Ubp1-201ENSMUST00000009885 Ube2uB1AUC4 352 aa26.43■■□□□ 1.82
Ubp1-201ENSMUST00000009885 Crybg2B7ZCC2 1516 aa26.42■■□□□ 1.82
Ubp1-201ENSMUST00000009885 Eif5bQ05D44 1216 aaKnown RBP26.37■■□□□ 1.81
Ubp1-201ENSMUST00000009885 Il27Q8K3I6 234 aa26.36■■□□□ 1.81
Ubp1-201ENSMUST00000009885 Calr4Q3TQS0 420 aa26.31■■□□□ 1.8
Ubp1-201ENSMUST00000009885 Synj1Q8CHC4 1574 aa26.3■■□□□ 1.8
Ubp1-201ENSMUST00000009885 Cep162Q6ZQ06 1403 aa26.29■■□□□ 1.8
Ubp1-201ENSMUST00000009885 Ifnlr1Q8CGK5 535 aa26.19■■□□□ 1.78
Ubp1-201ENSMUST00000009885 Rapgef2Q8CHG7 1496 aa26.17■■□□□ 1.78
Ubp1-201ENSMUST00000009885 Rtl5Q5DTT4 599 aa26.14■■□□□ 1.77
Ubp1-201ENSMUST00000009885 Lmod2Q3UHZ5 550 aa26.13■■□□□ 1.77
Ubp1-201ENSMUST00000009885 Ppp4r2Q0VGB7 417 aa26.12■■□□□ 1.77
Ubp1-201ENSMUST00000009885 CftrP26361 1476 aa26.1■■□□□ 1.77
Ubp1-201ENSMUST00000009885 Nolc1E9Q5C9 702 aaKnown RBP26.1■■□□□ 1.77
Ubp1-201ENSMUST00000009885 Sycp2Q9CUU3 1500 aa26.1■■□□□ 1.77
Ubp1-201ENSMUST00000009885 PrkcshO08795 521 aa26.03■■□□□ 1.76
Ubp1-201ENSMUST00000009885 Znf710Q3U288 666 aa26■■□□□ 1.75
Ubp1-201ENSMUST00000009885 Wdr43Q6ZQL4 677 aaKnown RBP25.92■■□□□ 1.74
Ubp1-201ENSMUST00000009885 Supt16hQ920B9 1047 aa25.91■■□□□ 1.74
Ubp1-201ENSMUST00000009885 Setd5Q5XJV7 1441 aa25.91■■□□□ 1.74
Ubp1-201ENSMUST00000009885 Ncapd3Q6ZQK0 1506 aa25.9■■□□□ 1.74
Ubp1-201ENSMUST00000009885 P3h3Q8CG70 732 aa25.88■■□□□ 1.73
Ubp1-201ENSMUST00000009885 Fmn1Q05860 1466 aa25.87■■□□□ 1.73
Ubp1-201ENSMUST00000009885 BlmO88700 1416 aa25.86■■□□□ 1.73
Ubp1-201ENSMUST00000009885 Cc2d2aQ8CFW7 1633 aa25.86■■□□□ 1.73
Ubp1-201ENSMUST00000009885 Hspa5P20029 655 aaKnown RBP25.86■■□□□ 1.73
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms