RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Rhox8Q6VSS7 320 aa32.5■■■□□ 2.79
Ubp1-201ENSMUST00000009885 NischQ80TM9 1593 aa31.91■■■□□ 2.7
Ubp1-201ENSMUST00000009885 Rpgrip1Q9EPQ2 1331 aa31.48■■■□□ 2.63
Ubp1-201ENSMUST00000009885 Ehmt2Q9Z148 1263 aaKnown RBP31.14■■■□□ 2.58
Ubp1-201ENSMUST00000009885 Abcc9P70170 1546 aa30.61■■■□□ 2.49
Ubp1-201ENSMUST00000009885 Acin1Q9JIX8 1338 aaKnown RBP30.6■■■□□ 2.49
Ubp1-201ENSMUST00000009885 Ccdc180J3QNE4 1664 aa30.46■■■□□ 2.47
Ubp1-201ENSMUST00000009885 Rtl1Q7M732 1744 aa30.36■■■□□ 2.45
Ubp1-201ENSMUST00000009885 Pcgf6Q99NA9 353 aa30.16■■■□□ 2.42
Ubp1-201ENSMUST00000009885 Ccdc136Q3TVA9 1136 aa29.87■■■□□ 2.37
Ubp1-201ENSMUST00000009885 Abcc8B2RUS7 1588 aa29.74■■■□□ 2.35
Ubp1-201ENSMUST00000009885 Gm35339A0A140LHH9 1649 aa29.68■■■□□ 2.34
Ubp1-201ENSMUST00000009885 Supt5hO55201 1082 aaKnown RBP29.5■■■□□ 2.31
Ubp1-201ENSMUST00000009885 HrcG5E8J6 738 aa29.49■■■□□ 2.31
Ubp1-201ENSMUST00000009885 Trim41Q5NCC3 630 aa29.37■■■□□ 2.29
Ubp1-201ENSMUST00000009885 Zeb1Q64318 1117 aa29.35■■■□□ 2.29
Ubp1-201ENSMUST00000009885 Zcchc6Q5BLK4 1491 aaKnown RBP29.14■■■□□ 2.25
Ubp1-201ENSMUST00000009885 Dcaf1Q80TR8 1506 aa29.13■■■□□ 2.25
Ubp1-201ENSMUST00000009885 Neurod1Q60867 357 aa29.05■■■□□ 2.24
Ubp1-201ENSMUST00000009885 Las1lA2BE28 776 aaKnown RBP28.99■■■□□ 2.23
Ubp1-201ENSMUST00000009885 Gab3Q8BSM5 595 aa28.87■■■□□ 2.21
Ubp1-201ENSMUST00000009885 Cngb1E1AZ71 1325 aa28.82■■■□□ 2.2
Ubp1-201ENSMUST00000009885 Wdr66E9Q743 1299 aa28.59■■■□□ 2.17
Ubp1-201ENSMUST00000009885 NefmP08553 848 aa28.51■■■□□ 2.15
Ubp1-201ENSMUST00000009885 Sall2Q9QX96 1004 aa28.4■■■□□ 2.14
Ubp1-201ENSMUST00000009885 Mier1Q5UAK0 511 aa28.35■■■□□ 2.13
Ubp1-201ENSMUST00000009885 Csrnp3P59055 597 aa28.27■■■□□ 2.12
Ubp1-201ENSMUST00000009885 Ppargc1bQ8VHJ7 1014 aa28.25■■■□□ 2.11
Ubp1-201ENSMUST00000009885 1700123L14RikQ3V2K7 440 aa28.18■■■□□ 2.1
Ubp1-201ENSMUST00000009885 Cep164Q5DU05 1446 aa28.11■■■□□ 2.09
Ubp1-201ENSMUST00000009885 UbtfP25976 765 aaKnown RBP28.09■■■□□ 2.09
Ubp1-201ENSMUST00000009885 Anks4bQ8K3X6 423 aa28.05■■■□□ 2.08
Ubp1-201ENSMUST00000009885 Cdk11bP24788 784 aaKnown RBP28.04■■■□□ 2.08
Ubp1-201ENSMUST00000009885 Rb1cc1Q9ESK9 1588 aa28.04■■■□□ 2.08
Ubp1-201ENSMUST00000009885 Chic1Q8CBW7 227 aa28■■■□□ 2.07
Ubp1-201ENSMUST00000009885 CenpbP27790 599 aa27.97■■■□□ 2.07
Ubp1-201ENSMUST00000009885 Nop58Q6DFW4 536 aaKnown RBP27.95■■■□□ 2.07
Ubp1-201ENSMUST00000009885 Gm38655A0A286YDK6 273 aa27.92■■■□□ 2.06
Ubp1-201ENSMUST00000009885 Esf1Q3V1V3 845 aaKnown RBP27.78■■■□□ 2.04
Ubp1-201ENSMUST00000009885 Aebp2Q9Z248 504 aaKnown RBP27.75■■■□□ 2.03
Ubp1-201ENSMUST00000009885 Myt1lP97500 1187 aa27.66■■■□□ 2.02
Ubp1-201ENSMUST00000009885 Myt1Q8CFC2 1127 aa27.56■■■□□ 2
Ubp1-201ENSMUST00000009885 ClspnQ80YR7 1315 aa27.56■■■□□ 2
Ubp1-201ENSMUST00000009885 Aplp2Q06335 707 aa27.56■■■□□ 2
Ubp1-201ENSMUST00000009885 Baz1aO88379 1555 aa27.55■■■□□ 2
Ubp1-201ENSMUST00000009885 Rsf1E9PWW9 1441 aaKnown RBP27.52■■■□□ 2
Ubp1-201ENSMUST00000009885 TonslQ6NZL6 1363 aa27.37■■□□□ 1.97
Ubp1-201ENSMUST00000009885 Npm2Q80W85 207 aa27.24■■□□□ 1.95
Ubp1-201ENSMUST00000009885 Ccdc88bQ4QRL3 1481 aa27.19■■□□□ 1.94
Ubp1-201ENSMUST00000009885 Kdm5dQ62240 1548 aa27.14■■□□□ 1.93
Ubp1-201ENSMUST00000009885 Mapk8ip2Q9ERE9 830 aa27.12■■□□□ 1.93
Ubp1-201ENSMUST00000009885 DiexfQ8BTT6 772 aaKnown RBP27.12■■□□□ 1.93
Ubp1-201ENSMUST00000009885 ScribQ80U72 1612 aa27.07■■□□□ 1.92
Ubp1-201ENSMUST00000009885 Plekhg3Q4VAC9 1341 aa27.06■■□□□ 1.92
Ubp1-201ENSMUST00000009885 Ap3b1Q9Z1T1 1105 aa27.01■■□□□ 1.91
Ubp1-201ENSMUST00000009885 Fam71e1A1L3C1 212 aa26.99■■□□□ 1.91
Ubp1-201ENSMUST00000009885 SafbD3YXK2 937 aaKnown RBP26.98■■□□□ 1.91
Ubp1-201ENSMUST00000009885 Eid3Q3V124 375 aa26.98■■□□□ 1.91
Ubp1-201ENSMUST00000009885 Brd4Q9ESU6 1400 aaKnown RBP26.96■■□□□ 1.91
Ubp1-201ENSMUST00000009885 Tnnt3Q9QZ47 272 aa26.92■■□□□ 1.9
Ubp1-201ENSMUST00000009885 Golga3P55937 1487 aa26.89■■□□□ 1.9
Ubp1-201ENSMUST00000009885 Hnrnpul2Q00PI9 745 aaKnown RBP26.89■■□□□ 1.89
Ubp1-201ENSMUST00000009885 Smarca2Q6DIC0 1577 aa26.83■■□□□ 1.89
Ubp1-201ENSMUST00000009885 NacadQ5SWP3 1504 aa26.83■■□□□ 1.88
Ubp1-201ENSMUST00000009885 Slc24a1Q91WD8 1130 aa26.78■■□□□ 1.88
Ubp1-201ENSMUST00000009885 Bcl11aQ9QYE3 773 aa26.69■■□□□ 1.86
Ubp1-201ENSMUST00000009885 Clip1Q922J3 1391 aa26.63■■□□□ 1.85
Ubp1-201ENSMUST00000009885 NclP09405 707 aaKnown RBP26.62■■□□□ 1.85
Ubp1-201ENSMUST00000009885 Stra8P70278 393 aa26.59■■□□□ 1.85
Ubp1-201ENSMUST00000009885 Anp32aO35381 247 aa26.56■■□□□ 1.84
Ubp1-201ENSMUST00000009885 Pelp1Q9DBD5 1123 aaKnown RBP26.55■■□□□ 1.84
Ubp1-201ENSMUST00000009885 Cecr2E9Q2Z1 1453 aa26.5■■□□□ 1.83
Ubp1-201ENSMUST00000009885 Fam50aQ9WV03 339 aaKnown RBP26.49■■□□□ 1.83
Ubp1-201ENSMUST00000009885 Ttbk1Q6PCN3 1308 aa26.43■■□□□ 1.82
Ubp1-201ENSMUST00000009885 Ube2uB1AUC4 352 aa26.43■■□□□ 1.82
Ubp1-201ENSMUST00000009885 Crybg2B7ZCC2 1516 aa26.42■■□□□ 1.82
Ubp1-201ENSMUST00000009885 Eif5bQ05D44 1216 aaKnown RBP26.37■■□□□ 1.81
Ubp1-201ENSMUST00000009885 Il27Q8K3I6 234 aa26.36■■□□□ 1.81
Ubp1-201ENSMUST00000009885 Calr4Q3TQS0 420 aa26.31■■□□□ 1.8
Ubp1-201ENSMUST00000009885 Synj1Q8CHC4 1574 aa26.3■■□□□ 1.8
Ubp1-201ENSMUST00000009885 Cep162Q6ZQ06 1403 aa26.29■■□□□ 1.8
Ubp1-201ENSMUST00000009885 Ifnlr1Q8CGK5 535 aa26.19■■□□□ 1.78
Ubp1-201ENSMUST00000009885 Rapgef2Q8CHG7 1496 aa26.17■■□□□ 1.78
Ubp1-201ENSMUST00000009885 Rtl5Q5DTT4 599 aa26.14■■□□□ 1.77
Ubp1-201ENSMUST00000009885 Lmod2Q3UHZ5 550 aa26.13■■□□□ 1.77
Ubp1-201ENSMUST00000009885 Ppp4r2Q0VGB7 417 aa26.12■■□□□ 1.77
Ubp1-201ENSMUST00000009885 CftrP26361 1476 aa26.1■■□□□ 1.77
Ubp1-201ENSMUST00000009885 Nolc1E9Q5C9 702 aaKnown RBP26.1■■□□□ 1.77
Ubp1-201ENSMUST00000009885 Sycp2Q9CUU3 1500 aa26.1■■□□□ 1.77
Ubp1-201ENSMUST00000009885 PrkcshO08795 521 aa26.03■■□□□ 1.76
Ubp1-201ENSMUST00000009885 Znf710Q3U288 666 aa26■■□□□ 1.75
Ubp1-201ENSMUST00000009885 Wdr43Q6ZQL4 677 aaKnown RBP25.92■■□□□ 1.74
Ubp1-201ENSMUST00000009885 Supt16hQ920B9 1047 aa25.91■■□□□ 1.74
Ubp1-201ENSMUST00000009885 Setd5Q5XJV7 1441 aa25.91■■□□□ 1.74
Ubp1-201ENSMUST00000009885 Ncapd3Q6ZQK0 1506 aa25.9■■□□□ 1.74
Ubp1-201ENSMUST00000009885 P3h3Q8CG70 732 aa25.88■■□□□ 1.73
Ubp1-201ENSMUST00000009885 Fmn1Q05860 1466 aa25.87■■□□□ 1.73
Ubp1-201ENSMUST00000009885 BlmO88700 1416 aa25.86■■□□□ 1.73
Ubp1-201ENSMUST00000009885 Cc2d2aQ8CFW7 1633 aa25.86■■□□□ 1.73
Ubp1-201ENSMUST00000009885 Hspa5P20029 655 aaKnown RBP25.86■■□□□ 1.73
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms