RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Ighv1-4A0A075B5T4 117 aa9.22□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Sh2d1aO88890 126 aa9.22□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 TeppQ6IMH0 216 aa9.22□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Eif4ebp1Q60876 117 aa9.22□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Trav11A0A0B4J1J9 114 aa9.21□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Polr2kQ63871 58 aa9.21□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 HampQ9EQ21 83 aa9.21□□□□□ -0.93
Pcdh1-202ENSMUST00000159405 Atp6v0e1Q9CQD8 81 aa9.21□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Ighv1-53A0A075B5W3 117 aa9.21□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Defb30Q30KN4 75 aa9.21□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 AI854703Q8BIN3 203 aa9.21□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Dpm3Q9D1Q4 92 aa9.21□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 1700056E22RikF7CNM6 234 aa9.2□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Bles03Q8VD62 251 aa9.2□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Ovol3D3YYM0 189 aa9.2□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Gm5878E9PUB3 99 aa9.2□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 P06328 117 aa9.2□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Minos1Q7TNS2 76 aa9.2□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Atp5g1Q9CR84 136 aa9.2□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Ighv12-3A0A075B5T1 117 aa9.2□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Smim26Q3V460 107 aa9.2□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 B230307C23RikQ8BLB2 64 aa9.19□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Gm10192Q3V0S1 108 aa9.19□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Dkk4Q8VEJ3 221 aa9.19□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Ly6hQ9WUC3 139 aa9.19□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Ighv8-11A0A075B5X4 119 aa9.19□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Fam19a5Q91WE9 132 aa9.19□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Spink12Q9D256 87 aa9.19□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 AngP21570 145 aa9.18□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 LoxP28301 411 aa9.18□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Cd164l2Q9D6W7 172 aa9.18□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Adgrg4B7ZCC9 3073 aa9.18□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 SelenowP63300 88 aa9.18□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Ndufb4Q9CQC7 129 aa9.18□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Col27a1Q5QNQ9 1845 aa9.17□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Igkv4-57-1A0A075B5M4 119 aa9.17□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Trav13n-1A0A0G2JEU8 110 aa9.17□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 P01729 129 aa9.17□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 1500011B03RikQ3TTH7 73 aa9.17□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Defb29Q8BGW9 78 aa9.17□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 A130051J06RikQ8CAU1 227 aa9.17□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Gm15217A2CG07 155 aa9.16□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 5730596B20RikQ8BQ08 205 aa9.16□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Spata25Q9DA57 226 aa9.16□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Gm9970F6ZED4 185 aa9.16□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Eif4ebp3Q80VV3 101 aa9.16□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 A730015C16RikQ8C992 119 aa9.16□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 3110018I06RikQ9CXS0 120 aa9.16□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Nbl1Q61477 178 aa9.15□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Igkv1-35A0A0G2JDE5 120 aa9.15□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Ighv1-82A0A0G2JEU7 117 aa9.15□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 MifP34884 115 aaKnown RBP9.15□□□□□ -0.94
Pcdh1-202ENSMUST00000159405 Igkv4-59A0A0B4J1I8 117 aa9.14□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Pla2g2aP31482 146 aa9.14□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Mast4Q811L6 2618 aa9.14□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Ighv1-74A0A0G2JGK2 117 aa9.14□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 7530416G11RikJ3QJX6 159 aa9.14□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 BC025920Q3US60 128 aa9.14□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Zfand3Q497H0 227 aa9.14□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Klk1b4P00757 256 aa9.14□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Rpl18aP62717 176 aaKnown RBP9.14□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Gphb5Q812B2 130 aa9.14□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 E030018B13RikJ3QMS9 113 aa9.13□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 GhrhP16043 103 aa9.13□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Klk11Q9QYN3 276 aa9.13□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Ly6gP35461 111 aa9.13□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Tmem258P61166 79 aa9.13□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Tcte2E9PY37 120 aa9.13□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Ndufs7Q9DC70 224 aa9.13□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Defa27F2Z403 93 aa9.12□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 P01820 115 aa9.12□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Gm10300Q8C8P7 189 aa9.12□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Gm17472A0A075B683 117 aa9.12□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Serp2Q6TAW2 65 aa9.12□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Pfn2Q9JJV2 140 aa9.12□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Lst1O08843 95 aa9.12□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 PemtQ61907 199 aa9.12□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 A830031A19RikQ8BNT5 113 aa9.12□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 4930442H23RikQ9D5G7 103 aa9.12□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 P01750 117 aa9.11□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 BlcapP62951 87 aa9.11□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Mrps21P58059 87 aa9.11□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Col4a4Q9QZR9 1682 aa9.11□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Zzef1Q5SSH7 2924 aa9.11□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Fn1P11276 2477 aaKnown RBP9.11□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Gm20499D3Z4G5 72 aa9.1□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Edn3P48299 214 aa9.1□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Rps28P62858 69 aaKnown RBP9.1□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 4930535I16RikQ9CUI2 172 aa9.1□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Notch1Q01705 2531 aa9.1□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Vps13cQ8BX70 3748 aa9.1□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Ighv1-75A0A075B5Y2 117 aa9.1□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Odf1Q61999 247 aa9.1□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Igkv4-70A0A0B4J1I5 116 aa9.09□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Trav4-3A0A0B4J1K1 110 aa9.09□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Ang3P97802 145 aa9.09□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 LhbO09108 141 aa9.09□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Prp2P05143 317 aa9.09□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Vpreb1P13372 142 aa9.09□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Ighv1-5A0A0A6YWG2 117 aa9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 85.5 ms