RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Rhox8Q6VSS7 320 aa21.23■□□□□ 0.99
Pcdh1-202ENSMUST00000159405 Rpgrip1Q9EPQ2 1331 aa21.11■□□□□ 0.97
Pcdh1-202ENSMUST00000159405 Ehmt2Q9Z148 1263 aaKnown RBP20.44■□□□□ 0.86
Pcdh1-202ENSMUST00000159405 Acin1Q9JIX8 1338 aaKnown RBP20.33■□□□□ 0.84
Pcdh1-202ENSMUST00000159405 Pcgf6Q99NA9 353 aa20.3■□□□□ 0.84
Pcdh1-202ENSMUST00000159405 Las1lA2BE28 776 aaKnown RBP19.73■□□□□ 0.75
Pcdh1-202ENSMUST00000159405 Supt5hO55201 1082 aaKnown RBP19.7■□□□□ 0.74
Pcdh1-202ENSMUST00000159405 NischQ80TM9 1593 aa19.66■□□□□ 0.74
Pcdh1-202ENSMUST00000159405 Neurod1Q60867 357 aa19.63■□□□□ 0.73
Pcdh1-202ENSMUST00000159405 Ccdc180J3QNE4 1664 aa19.57■□□□□ 0.72
Pcdh1-202ENSMUST00000159405 Zeb1Q64318 1117 aa19.37■□□□□ 0.69
Pcdh1-202ENSMUST00000159405 Rtl1Q7M732 1744 aa19.36■□□□□ 0.69
Pcdh1-202ENSMUST00000159405 Ccdc136Q3TVA9 1136 aa19.35■□□□□ 0.69
Pcdh1-202ENSMUST00000159405 CenpbP27790 599 aa19.27■□□□□ 0.68
Pcdh1-202ENSMUST00000159405 1700123L14RikQ3V2K7 440 aa19.19■□□□□ 0.66
Pcdh1-202ENSMUST00000159405 Trim41Q5NCC3 630 aa19.18■□□□□ 0.66
Pcdh1-202ENSMUST00000159405 Csrnp3P59055 597 aa19.1■□□□□ 0.65
Pcdh1-202ENSMUST00000159405 Cngb1E1AZ71 1325 aa19.09■□□□□ 0.65
Pcdh1-202ENSMUST00000159405 Myt1Q8CFC2 1127 aa19.07■□□□□ 0.64
Pcdh1-202ENSMUST00000159405 DiexfQ8BTT6 772 aaKnown RBP19.02■□□□□ 0.64
Pcdh1-202ENSMUST00000159405 Dcaf1Q80TR8 1506 aa18.99■□□□□ 0.63
Pcdh1-202ENSMUST00000159405 HrcG5E8J6 738 aa18.99■□□□□ 0.63
Pcdh1-202ENSMUST00000159405 Anks4bQ8K3X6 423 aa18.87■□□□□ 0.61
Pcdh1-202ENSMUST00000159405 Abcc9P70170 1546 aa18.84■□□□□ 0.61
Pcdh1-202ENSMUST00000159405 Sall2Q9QX96 1004 aa18.83■□□□□ 0.61
Pcdh1-202ENSMUST00000159405 Wdr66E9Q743 1299 aa18.81■□□□□ 0.6
Pcdh1-202ENSMUST00000159405 Gm38655A0A286YDK6 273 aa18.8■□□□□ 0.6
Pcdh1-202ENSMUST00000159405 NefmP08553 848 aa18.7■□□□□ 0.58
Pcdh1-202ENSMUST00000159405 Gab3Q8BSM5 595 aa18.68■□□□□ 0.58
Pcdh1-202ENSMUST00000159405 Cdk11bP24788 784 aaKnown RBP18.66■□□□□ 0.58
Pcdh1-202ENSMUST00000159405 Aplp2Q06335 707 aa18.66■□□□□ 0.58
Pcdh1-202ENSMUST00000159405 Esf1Q3V1V3 845 aaKnown RBP18.61■□□□□ 0.57
Pcdh1-202ENSMUST00000159405 Bcl11aQ9QYE3 773 aa18.6■□□□□ 0.57
Pcdh1-202ENSMUST00000159405 Ppargc1bQ8VHJ7 1014 aa18.59■□□□□ 0.57
Pcdh1-202ENSMUST00000159405 Nop58Q6DFW4 536 aaKnown RBP18.57■□□□□ 0.56
Pcdh1-202ENSMUST00000159405 Zcchc6Q5BLK4 1491 aaKnown RBP18.56■□□□□ 0.56
Pcdh1-202ENSMUST00000159405 Mier1Q5UAK0 511 aa18.47■□□□□ 0.55
Pcdh1-202ENSMUST00000159405 Fam71e1A1L3C1 212 aa18.27■□□□□ 0.52
Pcdh1-202ENSMUST00000159405 Aebp2Q9Z248 504 aaKnown RBP18.25■□□□□ 0.51
Pcdh1-202ENSMUST00000159405 Mapk8ip2Q9ERE9 830 aa18.22■□□□□ 0.51
Pcdh1-202ENSMUST00000159405 Abcc8B2RUS7 1588 aa18.2■□□□□ 0.5
Pcdh1-202ENSMUST00000159405 Gm35339A0A140LHH9 1649 aa18.19■□□□□ 0.5
Pcdh1-202ENSMUST00000159405 PrkcshO08795 521 aa18.19■□□□□ 0.5
Pcdh1-202ENSMUST00000159405 Myt1lP97500 1187 aa18.18■□□□□ 0.5
Pcdh1-202ENSMUST00000159405 ClspnQ80YR7 1315 aa18.15■□□□□ 0.5
Pcdh1-202ENSMUST00000159405 Amer1Q7TS75 1132 aa18.15■□□□□ 0.5
Pcdh1-202ENSMUST00000159405 UbtfP25976 765 aaKnown RBP18.12■□□□□ 0.49
Pcdh1-202ENSMUST00000159405 SafbD3YXK2 937 aaKnown RBP18.06■□□□□ 0.48
Pcdh1-202ENSMUST00000159405 Ifnlr1Q8CGK5 535 aa18.04■□□□□ 0.48
Pcdh1-202ENSMUST00000159405 Npm2Q80W85 207 aa17.99■□□□□ 0.47
Pcdh1-202ENSMUST00000159405 Cep164Q5DU05 1446 aa17.94■□□□□ 0.46
Pcdh1-202ENSMUST00000159405 Ttbk1Q6PCN3 1308 aa17.93■□□□□ 0.46
Pcdh1-202ENSMUST00000159405 Tnnt3Q9QZ47 272 aa17.92■□□□□ 0.46
Pcdh1-202ENSMUST00000159405 Hnrnpul2Q00PI9 745 aaKnown RBP17.92■□□□□ 0.46
Pcdh1-202ENSMUST00000159405 Il27Q8K3I6 234 aa17.9■□□□□ 0.46
Pcdh1-202ENSMUST00000159405 Pelp1Q9DBD5 1123 aaKnown RBP17.9■□□□□ 0.46
Pcdh1-202ENSMUST00000159405 Ap3b1Q9Z1T1 1105 aa17.85■□□□□ 0.45
Pcdh1-202ENSMUST00000159405 TonslQ6NZL6 1363 aa17.82■□□□□ 0.44
Pcdh1-202ENSMUST00000159405 Anp32aO35381 247 aa17.81■□□□□ 0.44
Pcdh1-202ENSMUST00000159405 Chic1Q8CBW7 227 aa17.77■□□□□ 0.44
Pcdh1-202ENSMUST00000159405 Ube2uB1AUC4 352 aa17.73■□□□□ 0.43
Pcdh1-202ENSMUST00000159405 Rtl5Q5DTT4 599 aa17.69■□□□□ 0.42
Pcdh1-202ENSMUST00000159405 Slc24a1Q91WD8 1130 aa17.54■□□□□ 0.4
Pcdh1-202ENSMUST00000159405 Stra8P70278 393 aa17.51■□□□□ 0.39
Pcdh1-202ENSMUST00000159405 Hdac5Q9Z2V6 1113 aa17.47■□□□□ 0.39
Pcdh1-202ENSMUST00000159405 Nolc1E9Q5C9 702 aaKnown RBP17.47■□□□□ 0.39
Pcdh1-202ENSMUST00000159405 Calr4Q3TQS0 420 aa17.46■□□□□ 0.39
Pcdh1-202ENSMUST00000159405 Eid3Q3V124 375 aa17.43■□□□□ 0.38
Pcdh1-202ENSMUST00000159405 Rsf1E9PWW9 1441 aaKnown RBP17.43■□□□□ 0.38
Pcdh1-202ENSMUST00000159405 Ppp4r2Q0VGB7 417 aa17.38■□□□□ 0.37
Pcdh1-202ENSMUST00000159405 Supt16hQ920B9 1047 aa17.36■□□□□ 0.37
Pcdh1-202ENSMUST00000159405 Eif5bQ05D44 1216 aaKnown RBP17.34■□□□□ 0.37
Pcdh1-202ENSMUST00000159405 Rb1cc1Q9ESK9 1588 aa17.28■□□□□ 0.36
Pcdh1-202ENSMUST00000159405 Plekhg3Q4VAC9 1341 aa17.27■□□□□ 0.36
Pcdh1-202ENSMUST00000159405 NclP09405 707 aaKnown RBP17.24■□□□□ 0.35
Pcdh1-202ENSMUST00000159405 4933416C03RikQ3V063 378 aa17.24■□□□□ 0.35
Pcdh1-202ENSMUST00000159405 Wdr43Q6ZQL4 677 aaKnown RBP17.23■□□□□ 0.35
Pcdh1-202ENSMUST00000159405 Upf2A2AT37 1269 aaKnown RBP17.21■□□□□ 0.35
Pcdh1-202ENSMUST00000159405 Znf710Q3U288 666 aa17.2■□□□□ 0.34
Pcdh1-202ENSMUST00000159405 Gtf3c3Q3TMP1 882 aa17.2■□□□□ 0.34
Pcdh1-202ENSMUST00000159405 Plcd4Q8K3R3 807 aa17.18■□□□□ 0.34
Pcdh1-202ENSMUST00000159405 Ccdc27Q3V036 639 aa17.17■□□□□ 0.34
Pcdh1-202ENSMUST00000159405 Ccdc88bQ4QRL3 1481 aa17.15■□□□□ 0.34
Pcdh1-202ENSMUST00000159405 Pknox2Q8BG99 474 aa17.15■□□□□ 0.34
Pcdh1-202ENSMUST00000159405 Fam50aQ9WV03 339 aaKnown RBP17.13■□□□□ 0.33
Pcdh1-202ENSMUST00000159405 Irx3P81067 507 aa17.13■□□□□ 0.33
Pcdh1-202ENSMUST00000159405 DaxxO35613 739 aa17.08■□□□□ 0.32
Pcdh1-202ENSMUST00000159405 Lmod2Q3UHZ5 550 aa17.08■□□□□ 0.32
Pcdh1-202ENSMUST00000159405 Hsp90aa1P07901 733 aaKnown RBP17.05■□□□□ 0.32
Pcdh1-202ENSMUST00000159405 Fgd1P52734 960 aa17.05■□□□□ 0.32
Pcdh1-202ENSMUST00000159405 Pak3Q61036 559 aa17.05■□□□□ 0.32
Pcdh1-202ENSMUST00000159405 P3h3Q8CG70 732 aa17.01■□□□□ 0.31
Pcdh1-202ENSMUST00000159405 Ccdc9Q8VC31 543 aaKnown RBP17.01■□□□□ 0.31
Pcdh1-202ENSMUST00000159405 NrdcQ8BHG1 1161 aa17■□□□□ 0.31
Pcdh1-202ENSMUST00000159405 Baz1aO88379 1555 aa17■□□□□ 0.31
Pcdh1-202ENSMUST00000159405 Slc4a3P16283 1227 aa16.98■□□□□ 0.31
Pcdh1-202ENSMUST00000159405 Zbtb7cQ8VCZ7 619 aa16.93■□□□□ 0.3
Pcdh1-202ENSMUST00000159405 Clip1Q922J3 1391 aa16.91■□□□□ 0.3
Pcdh1-202ENSMUST00000159405 Npm1Q61937 292 aaKnown RBP16.89■□□□□ 0.29
Pcdh1-202ENSMUST00000159405 Golga3P55937 1487 aa16.83■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms