RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Gm21693J3QK27 380 aa14.86□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Ube2cQ9D1C1 179 aa14.86□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Muc6Q80T03 2850 aa14.86□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 P03985 172 aa14.86□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Ighv1-11A0A0A6YWI9 117 aa14.85□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Gm904Q3V2L5 102 aa14.85□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Hist2h2beQ64524 126 aa14.85□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 P18527 97 aa14.84□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Q5BN45 167 aa14.84□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Tenm2Q9WTS5 2764 aa14.84□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Ighv6-7A0A0A6YWU3 119 aa14.83□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Gm16442D3YZG3 307 aa14.83□□□□□ -0.03
Ccdc88a-202ENSMUST00000109477 Aqp7O54794 303 aa14.83□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 P01811 117 aa14.83□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Cox7a2lQ61387 111 aa14.83□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Fam19a4Q7TPG5 135 aa14.83□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Ly6gP35461 111 aa14.82□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Shisa2Q8QZV2 295 aa14.82□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Il1f10Q8R459 152 aa14.82□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Ighv1-49A0A0A6YWX2 117 aa14.81□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Gm43218A0A0G2JGT0 114 aa14.81□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Spink1P09036 80 aa14.81□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Ighv2-6-8A0A0A6YWY9 116 aa14.8□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Gm21748Q3UE70 102 aa14.8□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Tcrg-V4A0A0B4J1J8 138 aa14.8□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Tcf24V9GWT9 166 aa14.8□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Gm10772F7AIG4 85 aa14.79□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 P01729 129 aa14.79□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 BC048562Q80ZQ7 204 aa14.79□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Atxn7l1Q9CZ05 146 aa14.79□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Gpx1P11352 201 aa14.78□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Rbm7Q9CQT2 265 aaKnown RBP14.78□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Trav6n-6A0A075B6B2 114 aa14.78□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Igkv2-137A0A0B4J1H6 120 aa14.78□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 NpwA0A1L1STR8 176 aa14.78□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Scgb1b19F6WYW0 93 aa14.78□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 CrygaP04345 174 aa14.78□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 PrcdQ00LT2 53 aa14.78□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Trappc1Q5NCF2 145 aa14.78□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Gm1553Q66VB7 94 aa14.78□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Q9D727 114 aa14.78□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 EsdQ9R0P3 282 aa14.78□□□□□ -0.04
Ccdc88a-202ENSMUST00000109477 Gm9513B3GLJ6 99 aa14.77□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Vmo1Q5SXG7 201 aa14.77□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 FasnP19096 2504 aaKnown RBP14.76□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Gm45521A0A1B0GRK0 198 aa14.76□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Gm45785A0A1B0GT05 94 aa14.76□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Gm9747Q810H1 104 aa14.76□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Ndufc2Q9CQ54 120 aa14.76□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Klk5Q9D140 293 aa14.76□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Esp4A8R0T8 117 aa14.75□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Sh2d1aO88890 126 aa14.75□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Ca1P13634 261 aa14.75□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Ighv1-72P01751 139 aa14.73□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Plac8l1Q08EJ0 177 aa14.73□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Ssbp1Q9CYR0 152 aaKnown RBP14.73□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 P0C913 63 aa14.72□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Clec4b2Q67DU8 208 aa14.72□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Ankrd39Q9D2X0 183 aa14.72□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Trav13n-1A0A0G2JEU8 110 aa14.72□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Brd3osA0A1B0GRB6 84 aa14.72□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Ccl17F6R5P4 103 aa14.72□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Gm10604Q3V0X7 143 aa14.72□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Atp6v0e2Q91XE7 81 aa14.72□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 TirapQ99JY1 241 aa14.72□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 3110070M22RikQ9DAQ7 118 aa14.72□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 Igkv4-53A0A0G2JFC6 119 aa14.71□□□□□ -0.05
Ccdc88a-202ENSMUST00000109477 MrapQ9D159 127 aa14.7□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Ighv8-5A0A0A6YY60 119 aa14.69□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Cdc42se2Q8BGH7 84 aa14.69□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Trbv13-2A0A140T8N6 113 aa14.68□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Ifitm10Q8BR26 201 aa14.68□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Mustn1Q99JI1 82 aa14.68□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Fam240aJ3QNP9 97 aa14.67□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Ndufa1O35683 70 aa14.67□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Tmem97Q8VD00 176 aa14.67□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Ighv8-13A0A075B5Y0 101 aa14.66□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Defa35E9QLQ1 93 aa14.66□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 CrxO54751 299 aa14.66□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Sslp1Q3UN54 99 aa14.66□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Tomm7Q9D173 55 aa14.66□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Bak1O08734 209 aa14.66□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Ube2d1P61080 147 aaKnown RBP14.66□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Trav3-3Q5R1C3 114 aa14.66□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 BC106179Q8C9L1 186 aa14.66□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Mpv17l2Q8VIK2 200 aa14.66□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Igkv4-79A0A075B5L8 119 aa14.65□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Esp24A8R0V6 68 aa14.65□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Gm16181B0V2H2 73 aa14.65□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 LeprotO89013 131 aa14.65□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 P01837 106 aa14.65□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Psors1c2Q80ZC9 134 aa14.65□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Gm9936Q8C864 160 aa14.65□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Dnah3Q8BW94 4083 aa14.65□□□□□ -0.06
Ccdc88a-202ENSMUST00000109477 Ighv8-11A0A075B5X4 119 aa14.63□□□□□ -0.07
Ccdc88a-202ENSMUST00000109477 CirbpP60824 172 aaKnown RBP14.63□□□□□ -0.07
Ccdc88a-202ENSMUST00000109477 Cks1brtQ3UNC9 96 aa14.63□□□□□ -0.07
Ccdc88a-202ENSMUST00000109477 Dmrt3Q80WT2 476 aa14.62□□□□□ -0.07
Ccdc88a-202ENSMUST00000109477 Tm2d2Q8R0I4 213 aa14.62□□□□□ -0.07
Ccdc88a-202ENSMUST00000109477 Foxi2Q3I5G5 311 aa14.61□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 261.6 ms