RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Cacna1gQ5SUF7 2381 aa7.07□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Cfap46E9Q2C0 2641 aa7.07□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Lrrc37aB1AWG4 3215 aa7.07□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Gm20499D3Z4G5 72 aa7.07□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Lage3Q9CR70 148 aa7.07□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Pglyrp1O88593 182 aa7.07□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Svs5P30933 122 aa7.07□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 BlcapP62951 87 aa7.07□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Vmo1Q5SXG7 201 aa7.07□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 EnhoQ8K1D8 76 aa7.07□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Znf580Q9DB38 172 aa7.07□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Igf2rQ07113 2483 aaKnown RBP7.07□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Ighv1-72P01751 139 aa7.06□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Trav6d-4Q5R1I0 115 aa7.06□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 AtmQ62388 3066 aa7.06□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Gm10322F7D7I4 111 aa7.06□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 1810062G17RikG3X8Y2 129 aa7.06□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 P01819 144 aa7.06□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Ang2Q64438 145 aa7.06□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Zfp407G3UVV3 2246 aa7.06□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Csmd1Q923L3 3564 aa7.06□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Trav13d-1A0A075B606 110 aa7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Ifitm6A0A1B0GS75 124 aa7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Chd7A2AJK6 2986 aaKnown RBP7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Nsun4C4P6S0 806 aaKnown RBP7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Spint4Q9D263 159 aa7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Bod1lE9Q6J5 3032 aa7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Gm10160F6Y577 67 aa7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Fxyd5P97808 178 aa7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Arhgap32Q811P8 2089 aa7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Ighv1-56A0A0A6YXG2 117 aa7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Gm16381A0A1Y7VKT9 73 aa7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 E130114P18RikF6S0S7 154 aa7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Snrpd3P62320 126 aaKnown RBP7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 E130208F15RikQ3UPV3 143 aa7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Fam229bQ8CF36 80 aa7.05□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Dnajc13D4AFX7 2248 aaKnown RBP7.04□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Fam208bQ5DTT3 2382 aa7.04□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Igkv20-101-2A0A0G2JDU3 113 aa7.04□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Cox7a1P56392 80 aa7.04□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Clpsl2Q3UW21 102 aa7.04□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Igkv1-35A0A0G2JDE5 120 aa7.04□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Gm19345G3UYD9 124 aa7.04□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Wfdc15bQ9JHY4 80 aa7.04□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 NacaP70670 2187 aaKnown RBP7.03□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Bles03Q8VD62 251 aa7.03□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Ighv3-8A0A075B5T0 131 aa7.03□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Ighv1-49A0A0A6YWX2 117 aa7.03□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Igkv8-21A0A140T8P7 120 aa7.03□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Ang4Q3TMQ6 144 aa7.03□□□□□ -1.28
Hmgb1-201ENSMUST00000085546 Lama1P19137 3084 aa7.02□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Nav2E9Q842 2432 aa7.02□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Minos1Q7TNS2 76 aa7.01□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Dpm3Q9D1Q4 92 aa7.01□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 P01823 113 aa7.01□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Spink8Q09TK9 105 aa7.01□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Ubl5Q9EPV8 73 aa7.01□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Ighv1-11A0A0A6YWI9 117 aa7□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Lyrm9Q3UN90 78 aa7□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Tff3Q62395 81 aa7□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Mob4Q6PEB6 225 aa7□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 P01753 117 aa7□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Ormdl1Q921I0 153 aa7□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Q9DAA7 145 aa7□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Gm15557A6PWY0 234 aa7□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 OdaphJ3QNT8 126 aa7□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Prok1Q14A28 105 aa7□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Fam24aQ8CF27 98 aa7□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 1700011M02RikB1AX35 88 aa6.99□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Cd52Q64389 74 aa6.99□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Inafm2A0A1L1STD6 152 aa6.99□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Q4KKZ1 196 aa6.99□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Lypd8Q9D7S0 255 aa6.99□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Sox16Q62247 57 aa6.98□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Muc5acE9QAQ8 3455 aa6.98□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Gm10036E9PYL9 178 aaKnown RBP6.98□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Gm10401E9Q3K6 71 aa6.97□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Gm10192Q3V0S1 108 aa6.97□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Igkv4-57-1A0A075B5M4 119 aa6.97□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Ighv2-9-1A0A075B697 116 aa6.97□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Trav13n-1A0A0G2JEU8 110 aa6.97□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Ighv1-59A0A0A6YXE0 117 aa6.96□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Igkv1-117A0A140T8M0 119 aa6.96□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Defb29Q8BGW9 78 aa6.96□□□□□ -1.29
Hmgb1-201ENSMUST00000085546 Ighv3-1A0A075B5S6 116 aa6.96□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Igkv1-110A0A0B4J1I0 119 aa6.96□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Gm10570F6VB42 170 aa6.96□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Colca2F8VPY8 239 aa6.96□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Ndufa12Q7TMF3 145 aaKnown RBP6.96□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Trdv5A0A075B661 115 aa6.95□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 LhbO09108 141 aa6.95□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 CntrlA2AL36 2334 aa6.95□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Ighv10-3A0A075B5T6 119 aa6.95□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Igkv3-10A0A0G2JGN0 119 aa6.95□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Fam19a3Q7TPG6 132 aa6.95□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Sptbn1Q62261 2363 aaKnown RBP6.95□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 P01745 121 aa6.95□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Prr3Q811B5 190 aaKnown RBP6.95□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Spink12Q9D256 87 aa6.95□□□□□ -1.3
Hmgb1-201ENSMUST00000085546 Trav14-1A0A0G2JF94 121 aa6.94□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 65.4 ms