RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Vps13cQ8BX70 3748 aa8.07□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Dad1P61804 113 aa8.07□□□□□ -1.12
Rnf40-201ENSMUST00000033088 BC048562Q80ZQ7 204 aa8.07□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Gm10295Q8CCF3 114 aa8.07□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Gm10135F6TEE5 83 aa8.06□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Rpl36aP83882 106 aaKnown RBP8.06□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Dand5Q76LW6 185 aa8.06□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Epg5Q80TA9 2572 aa8.06□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Reg3gO09049 174 aa8.06□□□□□ -1.12
Rnf40-201ENSMUST00000033088 P04943 107 aa8.06□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Smim1P0C8K7 78 aa8.06□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Mrpl55Q9CZ83 127 aa8.06□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Cdip1Q9DB75 208 aa8.06□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Ighv1-50A0A075B5W1 117 aa8.05□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Ighv1-64A0A075B5X3 117 aa8.05□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Gm884A2A9H6 3643 aa8.05□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Ankrd17Q99NH0 2603 aaKnown RBP8.05□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Lst1O08843 95 aa8.05□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Sh2d1aO88890 126 aa8.05□□□□□ -1.12
Rnf40-201ENSMUST00000033088 P84751 237 aa8.05□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Ang3P97802 145 aa8.05□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Gata4Q08369 441 aa8.05□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Lyzl4Q9D925 145 aa8.05□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Ighv1-4A0A075B5T4 117 aa8.04□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Ly6hQ9WUC3 139 aa8.04□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Ighv1-12A0A0A6YXJ9 117 aa8.03□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Cox8cA6H666 72 aa8.03□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Klk12B2RVZ0 247 aa8.03□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Trank1Q8BV79 2999 aa8.03□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Lamtor3O88653 124 aa8.03□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Igfn1Q3KNY0 2849 aa8.03□□□□□ -1.12
Rnf40-201ENSMUST00000033088 4930432M17RikQ3V0W9 174 aa8.03□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Cfap126Q6P8X9 189 aa8.03□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Leap2Q91V13 76 aa8.03□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Q9D8Q6 235 aa8.03□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Csmd1Q923L3 3564 aa8.03□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Gm16381A0A1Y7VKT9 73 aa8.02□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Edn3P48299 214 aa8.02□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Ang4Q3TMQ6 144 aa8.02□□□□□ -1.12
Rnf40-201ENSMUST00000033088 ScxQ64124 207 aa8.02□□□□□ -1.12
Rnf40-201ENSMUST00000033088 Igkv4-61A0A0G2JH00 117 aa8.02□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Socs3O35718 225 aa8.02□□□□□ -1.13
Rnf40-201ENSMUST00000033088 BikO70337 150 aa8.02□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Usmg5Q78IK2 58 aa8.02□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Cep192E9Q4Y4 2514 aaKnown RBP8.02□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Trav13d-4A0A0G2JFX3 110 aa8.01□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Igkv8-16A0A0G2JDG9 121 aa8.01□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Rbm3O89086 153 aaKnown RBP8.01□□□□□ -1.13
Rnf40-201ENSMUST00000033088 P01725 110 aa8.01□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Gm9970F6ZED4 185 aa8.01□□□□□ -1.13
Rnf40-201ENSMUST00000033088 P01738 130 aa8.01□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Cox7a1P56392 80 aa8.01□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Igkv4-59A0A0B4J1I8 117 aa8□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Crlf1Q9JM58 425 aa8□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Igkv1-99F6XWB2 120 aa8□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Cops9Q3U898 57 aa8□□□□□ -1.13
Rnf40-201ENSMUST00000033088 9130230L23RikQ8CC80 163 aa8□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Ndufb4Q9CQC7 129 aa8□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Prr13Q9CQJ5 137 aa8□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Ndufa11Q9D8B4 141 aa8□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Igkv4-72A0A0B4J1I4 117 aa8□□□□□ -1.13
Rnf40-201ENSMUST00000033088 AngP21570 145 aa8□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Fn1P11276 2477 aaKnown RBP8□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Ighv2-7A0A075B5Q8 116 aa7.99□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Ighv1-58A0A075B5W9 117 aa7.99□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Gm15217A2CG07 155 aa7.99□□□□□ -1.13
Rnf40-201ENSMUST00000033088 1810032O08RikE9PZV8 113 aa7.99□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Mrpl52Q9D0Y8 121 aa7.99□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Smg1Q8BKX6 3658 aaKnown RBP7.99□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Defb26Q30KN7 186 aa7.99□□□□□ -1.13
Rnf40-201ENSMUST00000033088 PemtQ61907 199 aa7.99□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Notch1Q01705 2531 aa7.99□□□□□ -1.13
Rnf40-201ENSMUST00000033088 1500011B03RikQ3TTH7 73 aa7.99□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Atp6v0e2Q91XE7 81 aa7.99□□□□□ -1.13
Rnf40-201ENSMUST00000033088 P01748 117 aa7.98□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Trav4d-3A0A075B625 110 aa7.98□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Trav11A0A0B4J1J9 114 aa7.98□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Gm7075D3Z497 112 aa7.98□□□□□ -1.13
Rnf40-201ENSMUST00000033088 2010109I03RikQ9CQ11 111 aa7.98□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Nop10Q9CQS2 64 aa7.98□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Samd13D3YUG0 102 aa7.97□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Gm20499D3Z4G5 72 aa7.97□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Akap13E9Q394 2776 aa7.97□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Ighv3-4A0A0A6YXF1 117 aa7.97□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Igkv4-69A0A0B4J1I6 116 aa7.97□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Timm17aQ9Z0V8 171 aa7.97□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Ighv1-82A0A0G2JEU7 117 aa7.97□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Pgpep1lQ9CWB5 130 aa7.97□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Usp24B1AY13 2617 aaKnown RBP7.97□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Igkv4-54A0A0G2JES9 117 aa7.97□□□□□ -1.13
Rnf40-201ENSMUST00000033088 NbeaQ9EPN1 2936 aa7.96□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Ubr5Q80TP3 2792 aa7.96□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Igkv8-24A0A140T8P5 121 aa7.96□□□□□ -1.13
Rnf40-201ENSMUST00000033088 Reg3dQ9QUS9 175 aa7.96□□□□□ -1.13
Rnf40-201ENSMUST00000033088 LhbO09108 141 aa7.96□□□□□ -1.14
Rnf40-201ENSMUST00000033088 NrgnP60761 78 aa7.96□□□□□ -1.14
Rnf40-201ENSMUST00000033088 Gm17472A0A075B683 117 aa7.96□□□□□ -1.14
Rnf40-201ENSMUST00000033088 Srsf2Q62093 221 aaKnown RBP7.96□□□□□ -1.14
Rnf40-201ENSMUST00000033088 Gm21994F6T2D2 329 aa7.95□□□□□ -1.14
Rnf40-201ENSMUST00000033088 Gm15557A6PWY0 234 aa7.95□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms