RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Igkv1-110A0A0B4J1I0 119 aa7.3□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Trav9n-2A0A0G2JDP3 113 aa7.3□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Fam216bQ8CC14 138 aa7.3□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Trav13-4-dv7A0A075B6C2 110 aa7.3□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Trav9-2A0A075B647 113 aa7.3□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Trav9-4A0A0B4J1K2 113 aa7.3□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Zc2hc1aQ8BJH1 324 aa7.3□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Wipf1Q8K1I7 493 aa7.3□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Col4a3Q9QZS0 1669 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Ptprz1B9EKR1 2312 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Tcl1b5P56845 121 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 EnhoQ8K1D8 76 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 SostQ99P68 211 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 4933414I15RikQ9D4D5 133 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Ighv3-6P18531 116 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Prok2Q9QXU7 128 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Rpl39P62892 51 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 AmelxP63277 210 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Trav12d-3A0A075B6A4 115 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Trbv13-1A0A0B4J1P8 112 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 5730596B20RikQ8BQ08 205 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Gm10192Q3V0S1 108 aa7.29□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Pla2g5P97391 137 aa7.28□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Mbd6Q3TY92 1003 aa7.28□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Rnf144bQ8BKD6 301 aa7.28□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Ighv10-3A0A075B5T6 119 aa7.28□□□□□ -1.24
Col6a5-201ENSMUST00000165165 P06320 134 aa7.28□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Plac8l1Q08EJ0 177 aa7.28□□□□□ -1.24
Col6a5-201ENSMUST00000165165 1700010B08RikQ9DAI7 102 aa7.28□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Zfp36l1P23950 338 aa7.28□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Fam110aQ8R184 296 aa7.27□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Q99M08 65 aa7.27□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Tns1E9Q0S6 1888 aaKnown RBP7.27□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Tmem223Q9CQE2 199 aaKnown RBP7.27□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Ighv1-77A0A0G2JGS9 117 aa7.27□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Smrp1Q2MH31 260 aa7.27□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Higd2aQ9CQJ1 106 aa7.27□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Zdbf2Q5SS00 2493 aaKnown RBP7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Timm17bQ9Z0V7 172 aa7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 CenpeQ6RT24 2474 aaKnown RBP7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Trbv16A0A0B4J1H3 115 aa7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Odf1Q61999 247 aa7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Fam208bQ5DTT3 2382 aa7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Gm10401E9Q3K6 71 aa7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Gm19684G3UZ45 117 aa7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Q8C708 225 aa7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Col24a1Q30D77 1733 aa7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Gm10542F6XDR3 90 aa7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Fhl1P97447 280 aaKnown RBP7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Znf672Q99LH4 468 aa7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Adamts20P59511 1906 aa7.26□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Ighv1-19A0A0A6YWX0 117 aa7.25□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Gm10638F6QEG2 257 aa7.25□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Sh2d1aO88890 126 aa7.25□□□□□ -1.25
Col6a5-201ENSMUST00000165165 P01649 108 aa7.25□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Dmrtc1c1Q9D410 238 aa7.25□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Gm10337F7DEP7 55 aa7.25□□□□□ -1.25
Col6a5-201ENSMUST00000165165 1500011B03RikQ3TTH7 73 aa7.25□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Lmo1Q924W9 156 aa7.25□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Csrp1P97315 193 aaKnown RBP7.25□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Apoc4Q61268 124 aa7.25□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Ccl24Q9JKC0 119 aa7.25□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Ighv1-52A0A0A6YXC3 117 aa7.25□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Fstl3Q9EQC7 256 aa7.24□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Gm42674D3YUT9 64 aa7.24□□□□□ -1.25
Col6a5-201ENSMUST00000165165 7420426K07RikQ3UX66 186 aa7.24□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Gm9887F6RFI0 207 aa7.24□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Rnf138Q9CQE0 245 aaKnown RBP7.24□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Ighv5-8A0A075B676 92 aa7.24□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Tpsg1Q9QUL7 311 aa7.24□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Ighv10-1A0A0B4J1J6 119 aa7.23□□□□□ -1.25
Col6a5-201ENSMUST00000165165 BlcapP62951 87 aa7.23□□□□□ -1.25
Col6a5-201ENSMUST00000165165 NrtnP97463 195 aa7.23□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Ighv1-12A0A0A6YXJ9 117 aa7.23□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Vopp1Q8R1C3 172 aa7.23□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Wfdc6bF6ULY1 148 aa7.23□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Igkv12-89A0A0G2JGW8 112 aa7.23□□□□□ -1.25
Col6a5-201ENSMUST00000165165 P01753 117 aa7.23□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Serp2Q6TAW2 65 aa7.23□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Gm10553J3QPF1 123 aa7.22□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Alms1Q8K4E0 3251 aa7.22□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Ighv1-82A0A0G2JEU7 117 aa7.22□□□□□ -1.25
Col6a5-201ENSMUST00000165165 P01750 117 aa7.22□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Cfc1P97766 202 aa7.22□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Ufsp1Q9CZP0 217 aa7.22□□□□□ -1.25
Col6a5-201ENSMUST00000165165 UrahQ9CRB3 118 aa7.22□□□□□ -1.25
Col6a5-201ENSMUST00000165165 NpyP57774 97 aa7.21□□□□□ -1.25
Col6a5-201ENSMUST00000165165 Gm21994F6T2D2 329 aa7.21□□□□□ -1.26
Col6a5-201ENSMUST00000165165 Gm37988J3QM41 62 aa7.21□□□□□ -1.26
Col6a5-201ENSMUST00000165165 A730015C16RikQ8C992 119 aa7.21□□□□□ -1.26
Col6a5-201ENSMUST00000165165 Ube2d4D3YUH6 135 aa7.21□□□□□ -1.26
Col6a5-201ENSMUST00000165165 U90926O08546 118 aa7.21□□□□□ -1.26
Col6a5-201ENSMUST00000165165 SprnQ8BWU1 147 aa7.21□□□□□ -1.26
Col6a5-201ENSMUST00000165165 TectaO08523 2155 aa7.2□□□□□ -1.26
Col6a5-201ENSMUST00000165165 Gm9970F6ZED4 185 aa7.2□□□□□ -1.26
Col6a5-201ENSMUST00000165165 Defb40Q70KL2 73 aa7.2□□□□□ -1.26
Col6a5-201ENSMUST00000165165 Klk5Q9D140 293 aa7.2□□□□□ -1.26
Col6a5-201ENSMUST00000165165 Ighv1-11A0A0A6YWI9 117 aa7.2□□□□□ -1.26
Col6a5-201ENSMUST00000165165 Ube2d1P61080 147 aaKnown RBP7.2□□□□□ -1.26
Col6a5-201ENSMUST00000165165 A830005F24RikQ8BRT5 167 aa7.2□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 130.5 ms