RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Rhox8Q6VSS7 320 aa15.79■□□□□ 0.12
Col6a5-201ENSMUST00000165165 Cngb1E1AZ71 1325 aa15.33■□□□□ 0.04
Col6a5-201ENSMUST00000165165 Pelp1Q9DBD5 1123 aaKnown RBP15.22■□□□□ 0.03
Col6a5-201ENSMUST00000165165 Rpgrip1Q9EPQ2 1331 aa15.15■□□□□ 0.02
Col6a5-201ENSMUST00000165165 Las1lA2BE28 776 aaKnown RBP15.13■□□□□ 0.01
Col6a5-201ENSMUST00000165165 Amer1Q7TS75 1132 aa14.91□□□□□ -0.02
Col6a5-201ENSMUST00000165165 Ehmt2Q9Z148 1263 aaKnown RBP14.73□□□□□ -0.05
Col6a5-201ENSMUST00000165165 Wdr66E9Q743 1299 aa14.7□□□□□ -0.06
Col6a5-201ENSMUST00000165165 Ube2uB1AUC4 352 aa14.49□□□□□ -0.09
Col6a5-201ENSMUST00000165165 4930567H17RikQ3V0K5 233 aa14.47□□□□□ -0.09
Col6a5-201ENSMUST00000165165 Zeb1Q64318 1117 aa14.4□□□□□ -0.1
Col6a5-201ENSMUST00000165165 CenpbP27790 599 aa14.26□□□□□ -0.13
Col6a5-201ENSMUST00000165165 Ttbk1Q6PCN3 1308 aa14.17□□□□□ -0.14
Col6a5-201ENSMUST00000165165 4933416C03RikQ3V063 378 aa14□□□□□ -0.17
Col6a5-201ENSMUST00000165165 Esf1Q3V1V3 845 aaKnown RBP13.99□□□□□ -0.17
Col6a5-201ENSMUST00000165165 Stra8P70278 393 aa13.97□□□□□ -0.17
Col6a5-201ENSMUST00000165165 Slc24a1Q91WD8 1130 aa13.95□□□□□ -0.18
Col6a5-201ENSMUST00000165165 Npm2Q80W85 207 aa13.87□□□□□ -0.19
Col6a5-201ENSMUST00000165165 Gab3Q8BSM5 595 aa13.81□□□□□ -0.2
Col6a5-201ENSMUST00000165165 Ccdc136Q3TVA9 1136 aa13.8□□□□□ -0.2
Col6a5-201ENSMUST00000165165 Myt1lP97500 1187 aa13.74□□□□□ -0.21
Col6a5-201ENSMUST00000165165 Myt1Q8CFC2 1127 aa13.74□□□□□ -0.21
Col6a5-201ENSMUST00000165165 NeflP08551 543 aa13.63□□□□□ -0.23
Col6a5-201ENSMUST00000165165 NefmP08553 848 aa13.53□□□□□ -0.24
Col6a5-201ENSMUST00000165165 UbtfP25976 765 aaKnown RBP13.53□□□□□ -0.24
Col6a5-201ENSMUST00000165165 Rtl1Q7M732 1744 aa13.5□□□□□ -0.25
Col6a5-201ENSMUST00000165165 Eif5bQ05D44 1216 aaKnown RBP13.49□□□□□ -0.25
Col6a5-201ENSMUST00000165165 Cdk11bP24788 784 aaKnown RBP13.49□□□□□ -0.25
Col6a5-201ENSMUST00000165165 NrdcQ8BHG1 1161 aa13.47□□□□□ -0.25
Col6a5-201ENSMUST00000165165 Acin1Q9JIX8 1338 aaKnown RBP13.47□□□□□ -0.25
Col6a5-201ENSMUST00000165165 Anp32bQ9EST5 272 aaKnown RBP13.45□□□□□ -0.26
Col6a5-201ENSMUST00000165165 Tnnt3Q9QZ47 272 aa13.44□□□□□ -0.26
Col6a5-201ENSMUST00000165165 HrcG5E8J6 738 aa13.42□□□□□ -0.26
Col6a5-201ENSMUST00000165165 Trim41Q5NCC3 630 aa13.41□□□□□ -0.26
Col6a5-201ENSMUST00000165165 Rtl5Q5DTT4 599 aa13.39□□□□□ -0.27
Col6a5-201ENSMUST00000165165 Ccdc180J3QNE4 1664 aa13.34□□□□□ -0.27
Col6a5-201ENSMUST00000165165 Os9Q8K2C7 672 aa13.3□□□□□ -0.28
Col6a5-201ENSMUST00000165165 DiexfQ8BTT6 772 aaKnown RBP13.28□□□□□ -0.28
Col6a5-201ENSMUST00000165165 Neurod1Q60867 357 aa13.27□□□□□ -0.29
Col6a5-201ENSMUST00000165165 CatipB9EKE5 520 aa13.25□□□□□ -0.29
Col6a5-201ENSMUST00000165165 Nop58Q6DFW4 536 aaKnown RBP13.25□□□□□ -0.29
Col6a5-201ENSMUST00000165165 NclP09405 707 aaKnown RBP13.23□□□□□ -0.29
Col6a5-201ENSMUST00000165165 DaxxO35613 739 aa13.23□□□□□ -0.29
Col6a5-201ENSMUST00000165165 NischQ80TM9 1593 aa13.22□□□□□ -0.29
Col6a5-201ENSMUST00000165165 Pcgf6Q99NA9 353 aa13.14□□□□□ -0.31
Col6a5-201ENSMUST00000165165 Fam50aQ9WV03 339 aaKnown RBP13.09□□□□□ -0.31
Col6a5-201ENSMUST00000165165 Ythdc1E9Q5K9 736 aaKnown RBP13.07□□□□□ -0.32
Col6a5-201ENSMUST00000165165 Ppargc1bQ8VHJ7 1014 aa13.07□□□□□ -0.32
Col6a5-201ENSMUST00000165165 Lmod3E9QA62 571 aa13□□□□□ -0.33
Col6a5-201ENSMUST00000165165 Ap3b1Q9Z1T1 1105 aa12.99□□□□□ -0.33
Col6a5-201ENSMUST00000165165 ArxO35085 564 aa12.96□□□□□ -0.34
Col6a5-201ENSMUST00000165165 Anp32aO35381 247 aa12.95□□□□□ -0.34
Col6a5-201ENSMUST00000165165 TonslQ6NZL6 1363 aa12.93□□□□□ -0.34
Col6a5-201ENSMUST00000165165 Upf2A2AT37 1269 aaKnown RBP12.93□□□□□ -0.34
Col6a5-201ENSMUST00000165165 Chic1Q8CBW7 227 aa12.91□□□□□ -0.34
Col6a5-201ENSMUST00000165165 Il27Q8K3I6 234 aa12.88□□□□□ -0.35
Col6a5-201ENSMUST00000165165 Polr3glQ8R0C0 218 aa12.87□□□□□ -0.35
Col6a5-201ENSMUST00000165165 Supt5hO55201 1082 aaKnown RBP12.85□□□□□ -0.35
Col6a5-201ENSMUST00000165165 Hsp90aa1P07901 733 aaKnown RBP12.84□□□□□ -0.35
Col6a5-201ENSMUST00000165165 Nlrp6Q91WS2 869 aa12.82□□□□□ -0.36
Col6a5-201ENSMUST00000165165 Zbtb7cQ8VCZ7 619 aa12.75□□□□□ -0.37
Col6a5-201ENSMUST00000165165 Gm13697A2AK42 830 aa12.72□□□□□ -0.37
Col6a5-201ENSMUST00000165165 Atp1b4Q99ME6 356 aa12.68□□□□□ -0.38
Col6a5-201ENSMUST00000165165 DekQ7TNV0 380 aaKnown RBP12.67□□□□□ -0.38
Col6a5-201ENSMUST00000165165 Zbtb4Q5F293 982 aa12.66□□□□□ -0.38
Col6a5-201ENSMUST00000165165 Hnrnpul2Q00PI9 745 aaKnown RBP12.65□□□□□ -0.38
Col6a5-201ENSMUST00000165165 Prdm10Q3UTQ7 1184 aa12.64□□□□□ -0.39
Col6a5-201ENSMUST00000165165 Trim44Q9QXA7 346 aa12.64□□□□□ -0.39
Col6a5-201ENSMUST00000165165 Csrnp3P59055 597 aa12.64□□□□□ -0.39
Col6a5-201ENSMUST00000165165 Vsig10D3YX43 558 aa12.63□□□□□ -0.39
Col6a5-201ENSMUST00000165165 Gm38655A0A286YDK6 273 aa12.61□□□□□ -0.39
Col6a5-201ENSMUST00000165165 Rangap1P46061 589 aaKnown RBP12.6□□□□□ -0.39
Col6a5-201ENSMUST00000165165 ClspnQ80YR7 1315 aa12.59□□□□□ -0.39
Col6a5-201ENSMUST00000165165 Erich6D3Z6S9 713 aa12.58□□□□□ -0.4
Col6a5-201ENSMUST00000165165 Mier1Q5UAK0 511 aa12.54□□□□□ -0.4
Col6a5-201ENSMUST00000165165 Ppp4r2Q0VGB7 417 aa12.53□□□□□ -0.4
Col6a5-201ENSMUST00000165165 Gm13695A2AK44 830 aa12.52□□□□□ -0.41
Col6a5-201ENSMUST00000165165 Mapk8ip2Q9ERE9 830 aa12.49□□□□□ -0.41
Col6a5-201ENSMUST00000165165 Ccdc9Q8VC31 543 aaKnown RBP12.48□□□□□ -0.41
Col6a5-201ENSMUST00000165165 PtmaP26350 111 aa12.47□□□□□ -0.41
Col6a5-201ENSMUST00000165165 Znf326O88291 580 aa12.45□□□□□ -0.42
Col6a5-201ENSMUST00000165165 Calr4Q3TQS0 420 aa12.44□□□□□ -0.42
Col6a5-201ENSMUST00000165165 Znf316Q6PGE4 1016 aa12.44□□□□□ -0.42
Col6a5-201ENSMUST00000165165 Hdac5Q9Z2V6 1113 aa12.41□□□□□ -0.42
Col6a5-201ENSMUST00000165165 Ifnlr1Q8CGK5 535 aa12.4□□□□□ -0.42
Col6a5-201ENSMUST00000165165 Fgd1P52734 960 aa12.39□□□□□ -0.43
Col6a5-201ENSMUST00000165165 Lmod2Q3UHZ5 550 aa12.38□□□□□ -0.43
Col6a5-201ENSMUST00000165165 Hsp90ab1P11499 724 aaKnown RBP12.35□□□□□ -0.43
Col6a5-201ENSMUST00000165165 Rad21Q61550 635 aaKnown RBP12.35□□□□□ -0.43
Col6a5-201ENSMUST00000165165 Adam1bQ8R534 806 aa12.35□□□□□ -0.43
Col6a5-201ENSMUST00000165165 Aplp2Q06335 707 aa12.34□□□□□ -0.43
Col6a5-201ENSMUST00000165165 Tnnt2P50752 301 aa12.34□□□□□ -0.43
Col6a5-201ENSMUST00000165165 Anks4bQ8K3X6 423 aa12.33□□□□□ -0.44
Col6a5-201ENSMUST00000165165 Plekhg3Q4VAC9 1341 aa12.33□□□□□ -0.44
Col6a5-201ENSMUST00000165165 Wdr43Q6ZQL4 677 aaKnown RBP12.32□□□□□ -0.44
Col6a5-201ENSMUST00000165165 Abcc9P70170 1546 aa12.31□□□□□ -0.44
Col6a5-201ENSMUST00000165165 Arid4bA2CG63 1314 aaKnown RBP12.3□□□□□ -0.44
Col6a5-201ENSMUST00000165165 PnnO35691 725 aaKnown RBP12.3□□□□□ -0.44
Col6a5-201ENSMUST00000165165 CanxP35564 591 aaKnown RBP12.27□□□□□ -0.45
Col6a5-201ENSMUST00000165165 Mak16Q8BGS0 296 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 194.9 ms