RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Pear1Q8VIK5 1034 aa5.68□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Ighv1-53A0A075B5W3 117 aa5.68□□□□□ -1.5
Bdnf-209ENSMUST00000111050 1700084M14RikB1AT01 78 aa5.68□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Zfand3Q497H0 227 aa5.68□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Ang2Q64438 145 aa5.68□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Klk11Q9QYN3 276 aa5.68□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Rif1Q6PR54 2419 aaKnown RBP5.68□□□□□ -1.5
Bdnf-209ENSMUST00000111050 TectaO08523 2155 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Cfap126Q6P8X9 189 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Fam19a4Q7TPG5 135 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Naa38Q9D2U5 125 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Gm15217A2CG07 155 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Spata46Q4FZF2 204 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Psmb11Q8BG41 302 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Fam24aQ8CF27 98 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 9430069I07RikQ9CX21 111 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Gm5878E9PUB3 99 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Gm17727E9Q4V7 109 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Sh2d1aO88890 126 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 A130051J06RikQ8CAU1 227 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Prelid3aQ8VE85 172 aa5.67□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Trav13d-1A0A075B606 110 aa5.66□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Fam19a5Q91WE9 132 aa5.66□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Spata25Q9DA57 226 aa5.66□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Notch3Q61982 2318 aa5.66□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Tcte2E9PY37 120 aa5.66□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Gm10521E9PZK0 135 aa5.66□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Hist1h4aP62806 103 aaKnown RBP5.66□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Q4KKZ1 196 aa5.66□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Trav6-2Q5R1I4 113 aa5.66□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Ighv1-81A0A075B5Y4 117 aa5.66□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Defa28D3Z1V9 94 aa5.66□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Tmem243B2RVB9 118 aa5.65□□□□□ -1.5
Bdnf-209ENSMUST00000111050 OdaphJ3QNT8 126 aa5.65□□□□□ -1.5
Bdnf-209ENSMUST00000111050 P01820 115 aa5.65□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Hbb-b2P02089 147 aa5.65□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Rps28P62858 69 aaKnown RBP5.65□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Sptan1P16546 2472 aaKnown RBP5.65□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Gphb5Q812B2 130 aa5.65□□□□□ -1.5
Bdnf-209ENSMUST00000111050 Ly6lH3BJG9 140 aa5.65□□□□□ -1.51
Bdnf-209ENSMUST00000111050 P06328 117 aa5.65□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Odf1Q61999 247 aa5.65□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Gm29666A0A087WQ99 126 aa5.65□□□□□ -1.51
Bdnf-209ENSMUST00000111050 E030018B13RikJ3QMS9 113 aa5.65□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Defa-rs2P17534 91 aa5.65□□□□□ -1.51
Bdnf-209ENSMUST00000111050 HampQ9EQ21 83 aa5.65□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Ly6hQ9WUC3 139 aa5.65□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Zfhx3Q61329 3726 aa5.64□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Ighv1-5A0A0A6YWG2 117 aa5.64□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Igkv4-70A0A0B4J1I5 116 aa5.64□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Atp5g1Q9CR84 136 aa5.64□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Trav11A0A0B4J1J9 114 aa5.64□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Gm9887F6RFI0 207 aa5.64□□□□□ -1.51
Bdnf-209ENSMUST00000111050 P01729 129 aa5.64□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Cops9Q3U898 57 aa5.64□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Gm10300Q8C8P7 189 aa5.64□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Prpf8Q99PV0 2335 aaKnown RBP5.64□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Spint3Q3UW09 88 aa5.64□□□□□ -1.51
Bdnf-209ENSMUST00000111050 A830031A19RikQ8BNT5 113 aa5.64□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Col6a4A2AX52 2309 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Colca2F8VPY8 239 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 P18532 116 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 H1fxQ80ZM5 188 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 5730596B20RikQ8BQ08 205 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Brk1Q91VR8 75 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Myo15bI7HPW8 3033 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Ighv8-11A0A075B5X4 119 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Ighv1-82A0A0G2JEU7 117 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Gm17732E9Q5I2 61 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 AngP21570 145 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 LoxP28301 411 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Cdkn1aP39689 159 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Gm7102J3QQ10 178 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Pip4p1Q3TWL2 284 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Minos1Q7TNS2 76 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 B230307C23RikQ8BLB2 64 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Cystm1Q8K353 104 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Spag11Q8K4N2 71 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 4930442H23RikQ9D5G7 103 aa5.63□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Ighv1-75A0A075B5Y2 117 aa5.62□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Gm17472A0A075B683 117 aa5.62□□□□□ -1.51
Bdnf-209ENSMUST00000111050 9430015G10RikA2ASP7 199 aa5.62□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Tmem258P61166 79 aa5.62□□□□□ -1.51
Bdnf-209ENSMUST00000111050 1500011B03RikQ3TTH7 73 aa5.62□□□□□ -1.51
Bdnf-209ENSMUST00000111050 B230104I21RikQ3USW4 141 aa5.62□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Gm10192Q3V0S1 108 aa5.62□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Rpl18aP62717 176 aaKnown RBP5.62□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Atp6v0e1Q9CQD8 81 aa5.62□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Nbl1Q61477 178 aa5.62□□□□□ -1.51
Bdnf-209ENSMUST00000111050 GhrhP16043 103 aa5.61□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Spg11Q3UHA3 2430 aa5.61□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Igkv4-57-1A0A075B5M4 119 aa5.61□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Ighv3-3A0A0A6YWL2 116 aa5.61□□□□□ -1.51
Bdnf-209ENSMUST00000111050 A730015C16RikQ8C992 119 aa5.61□□□□□ -1.51
Bdnf-209ENSMUST00000111050 4930564D02RikQ9D4S4 103 aa5.61□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Igkv4-91A0A075B5L2 119 aa5.61□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Igkv6-13A0A0G2JGY3 119 aa5.61□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Defa27F2Z403 93 aa5.61□□□□□ -1.51
Bdnf-209ENSMUST00000111050 MifP34884 115 aaKnown RBP5.61□□□□□ -1.51
Bdnf-209ENSMUST00000111050 Defb28Q3V2L0 89 aa5.61□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms