RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Cyyr1Q8VIH7 165 aa8.49□□□□□ -1.05
Vps54-202ENSMUST00000109578 Krtap26-1Q9D7N2 215 aa8.49□□□□□ -1.05
Vps54-202ENSMUST00000109578 Higd1aQ9JLR9 95 aa8.49□□□□□ -1.05
Vps54-202ENSMUST00000109578 Ighv1-52A0A0A6YXC3 117 aa8.48□□□□□ -1.05
Vps54-202ENSMUST00000109578 P01753 117 aa8.48□□□□□ -1.05
Vps54-202ENSMUST00000109578 Lrcol1Q3URS3 161 aa8.48□□□□□ -1.05
Vps54-202ENSMUST00000109578 Trav2Q5R1I9 109 aa8.48□□□□□ -1.05
Vps54-202ENSMUST00000109578 BC106179Q8C9L1 186 aa8.48□□□□□ -1.05
Vps54-202ENSMUST00000109578 Zc2hc1bQ9D534 172 aa8.48□□□□□ -1.05
Vps54-202ENSMUST00000109578 Muc2Q80Z19 2680 aa8.48□□□□□ -1.05
Vps54-202ENSMUST00000109578 Trbv16A0A0B4J1H3 115 aa8.48□□□□□ -1.05
Vps54-202ENSMUST00000109578 CckP09240 115 aa8.48□□□□□ -1.05
Vps54-202ENSMUST00000109578 Bri3P28662 125 aa8.48□□□□□ -1.05
Vps54-202ENSMUST00000109578 Runx1Q03347 451 aa8.48□□□□□ -1.05
Vps54-202ENSMUST00000109578 Znf580Q9DB38 172 aa8.48□□□□□ -1.05
Vps54-202ENSMUST00000109578 2310009B15RikA0A0A6YWI4 143 aa8.47□□□□□ -1.05
Vps54-202ENSMUST00000109578 Gm45717A0A1B0GT68 152 aa8.47□□□□□ -1.05
Vps54-202ENSMUST00000109578 Kmt2bO08550 2713 aa8.47□□□□□ -1.05
Vps54-202ENSMUST00000109578 Rpl32P62911 135 aaKnown RBP8.47□□□□□ -1.05
Vps54-202ENSMUST00000109578 Notch3Q61982 2318 aa8.47□□□□□ -1.05
Vps54-202ENSMUST00000109578 Fam19a4Q7TPG5 135 aa8.47□□□□□ -1.05
Vps54-202ENSMUST00000109578 Mrpl35Q9CQL6 188 aa8.47□□□□□ -1.05
Vps54-202ENSMUST00000109578 Gm6812B1AXU1 112 aa8.46□□□□□ -1.05
Vps54-202ENSMUST00000109578 Mpv17l2Q8VIK2 200 aa8.46□□□□□ -1.05
Vps54-202ENSMUST00000109578 Timm17aQ9Z0V8 171 aa8.46□□□□□ -1.06
Vps54-202ENSMUST00000109578 BC067074F6RXI4 2391 aa8.46□□□□□ -1.06
Vps54-202ENSMUST00000109578 CubnQ9JLB4 3623 aa8.45□□□□□ -1.06
Vps54-202ENSMUST00000109578 Ighv1-85A0A075B5Y6 117 aa8.45□□□□□ -1.06
Vps54-202ENSMUST00000109578 Gm17455G3UW87 128 aa8.45□□□□□ -1.06
Vps54-202ENSMUST00000109578 Smr3aQ61900 147 aa8.45□□□□□ -1.06
Vps54-202ENSMUST00000109578 Trav4n-4A0A075B615 110 aa8.45□□□□□ -1.06
Vps54-202ENSMUST00000109578 Ighv8-5A0A0A6YY60 119 aa8.45□□□□□ -1.06
Vps54-202ENSMUST00000109578 Ube2d3P61079 147 aa8.45□□□□□ -1.06
Vps54-202ENSMUST00000109578 Ube2d2P62838 147 aa8.45□□□□□ -1.06
Vps54-202ENSMUST00000109578 Ighv1-63A0A075B5X2 117 aa8.44□□□□□ -1.06
Vps54-202ENSMUST00000109578 Lect2O88803 151 aa8.44□□□□□ -1.06
Vps54-202ENSMUST00000109578 Dmrt3Q80WT2 476 aa8.44□□□□□ -1.06
Vps54-202ENSMUST00000109578 Il1f10Q8R459 152 aa8.44□□□□□ -1.06
Vps54-202ENSMUST00000109578 Dynlrb2Q9DAJ5 96 aa8.44□□□□□ -1.06
Vps54-202ENSMUST00000109578 Helz2E9QAM5 2947 aaKnown RBP8.44□□□□□ -1.06
Vps54-202ENSMUST00000109578 Cox8cA6H666 72 aa8.44□□□□□ -1.06
Vps54-202ENSMUST00000109578 Gm10490F6VBM2 120 aa8.44□□□□□ -1.06
Vps54-202ENSMUST00000109578 AngP21570 145 aa8.44□□□□□ -1.06
Vps54-202ENSMUST00000109578 Synj2bpQ9D6K5 145 aa8.44□□□□□ -1.06
Vps54-202ENSMUST00000109578 Arid1bE9Q4N7 2244 aa8.44□□□□□ -1.06
Vps54-202ENSMUST00000109578 Tep1P97499 2629 aa8.44□□□□□ -1.06
Vps54-202ENSMUST00000109578 LeprotO89013 131 aa8.43□□□□□ -1.06
Vps54-202ENSMUST00000109578 Ifitm10Q8BR26 201 aa8.43□□□□□ -1.06
Vps54-202ENSMUST00000109578 Tmem263Q9DAM7 115 aa8.43□□□□□ -1.06
Vps54-202ENSMUST00000109578 Crip2Q9DCT8 208 aaKnown RBP8.43□□□□□ -1.06
Vps54-202ENSMUST00000109578 A930009A15RikG3UYI6 118 aa8.43□□□□□ -1.06
Vps54-202ENSMUST00000109578 Trav3-1Q5R1I8 114 aa8.43□□□□□ -1.06
Vps54-202ENSMUST00000109578 Mfap4Q9D1H9 257 aa8.43□□□□□ -1.06
Vps54-202ENSMUST00000109578 TtrP07309 147 aa8.43□□□□□ -1.06
Vps54-202ENSMUST00000109578 Pcp4P63054 62 aa8.43□□□□□ -1.06
Vps54-202ENSMUST00000109578 Samd5Q3V1H9 173 aa8.42□□□□□ -1.06
Vps54-202ENSMUST00000109578 Defb47Q30KN1 79 aa8.42□□□□□ -1.06
Vps54-202ENSMUST00000109578 Klhdc1Q80YG3 406 aa8.42□□□□□ -1.06
Vps54-202ENSMUST00000109578 NpwA0A1L1STR8 176 aa8.42□□□□□ -1.06
Vps54-202ENSMUST00000109578 Gm933J3QPC1 141 aa8.42□□□□□ -1.06
Vps54-202ENSMUST00000109578 Rpl13aP19253 203 aaKnown RBP8.42□□□□□ -1.06
Vps54-202ENSMUST00000109578 A530064D06RikQ8BNV8 229 aa8.42□□□□□ -1.06
Vps54-202ENSMUST00000109578 Xirp2Q4U4S6 3784 aa8.42□□□□□ -1.06
Vps54-202ENSMUST00000109578 Tcrg-C1A0A075B5Z0 172 aa8.41□□□□□ -1.06
Vps54-202ENSMUST00000109578 Gm5819E9PZ96 154 aa8.41□□□□□ -1.06
Vps54-202ENSMUST00000109578 4930564D02RikQ9D4S4 103 aa8.41□□□□□ -1.06
Vps54-202ENSMUST00000109578 Morn5Q9DAI9 170 aa8.41□□□□□ -1.06
Vps54-202ENSMUST00000109578 Gm9513B3GLJ6 99 aa8.41□□□□□ -1.06
Vps54-202ENSMUST00000109578 B230217C12RikE9Q3Z1 139 aa8.41□□□□□ -1.06
Vps54-202ENSMUST00000109578 Ccl24Q9JKC0 119 aa8.41□□□□□ -1.06
Vps54-202ENSMUST00000109578 Reg3gO09049 174 aa8.41□□□□□ -1.06
Vps54-202ENSMUST00000109578 Cdip1Q9DB75 208 aa8.41□□□□□ -1.06
Vps54-202ENSMUST00000109578 Gm20730A0A075B5J6 119 aa8.4□□□□□ -1.06
Vps54-202ENSMUST00000109578 Fhl2O70433 279 aa8.4□□□□□ -1.06
Vps54-202ENSMUST00000109578 Tac4Q99N14 128 aa8.4□□□□□ -1.06
Vps54-202ENSMUST00000109578 Cryba4Q9JJV0 196 aa8.4□□□□□ -1.06
Vps54-202ENSMUST00000109578 Ighv1-5A0A0A6YWG2 117 aa8.4□□□□□ -1.06
Vps54-202ENSMUST00000109578 P84751 237 aa8.4□□□□□ -1.06
Vps54-202ENSMUST00000109578 Fam216aQ9DB54 251 aa8.4□□□□□ -1.06
Vps54-202ENSMUST00000109578 Gm11444F6QMA6 170 aa8.4□□□□□ -1.07
Vps54-202ENSMUST00000109578 Spata45Q9CVW4 97 aa8.4□□□□□ -1.07
Vps54-202ENSMUST00000109578 Hectd1Q69ZR2 2618 aaKnown RBP8.39□□□□□ -1.07
Vps54-202ENSMUST00000109578 Gm10135F6TEE5 83 aa8.39□□□□□ -1.07
Vps54-202ENSMUST00000109578 Trav13d-1A0A075B606 110 aa8.39□□□□□ -1.07
Vps54-202ENSMUST00000109578 P06329 120 aa8.39□□□□□ -1.07
Vps54-202ENSMUST00000109578 Atp5lQ9CPQ8 103 aa8.39□□□□□ -1.07
Vps54-202ENSMUST00000109578 Rmi2Q3UPE3 149 aa8.39□□□□□ -1.07
Vps54-202ENSMUST00000109578 Cfap126Q6P8X9 189 aa8.39□□□□□ -1.07
Vps54-202ENSMUST00000109578 BC048562Q80ZQ7 204 aa8.39□□□□□ -1.07
Vps54-202ENSMUST00000109578 Wnk1P83741 2377 aa8.38□□□□□ -1.07
Vps54-202ENSMUST00000109578 Gm9913Q8BQQ2 135 aa8.38□□□□□ -1.07
Vps54-202ENSMUST00000109578 Ighv5-9-1A0A0A6YVS4 126 aa8.37□□□□□ -1.07
Vps54-202ENSMUST00000109578 Krtap27-1E9PX37 202 aa8.37□□□□□ -1.07
Vps54-202ENSMUST00000109578 Trav9n-2A0A0G2JDP3 113 aa8.37□□□□□ -1.07
Vps54-202ENSMUST00000109578 4930470P17RikQ9D542 155 aa8.37□□□□□ -1.07
Vps54-202ENSMUST00000109578 Igkv4-91A0A075B5L2 119 aa8.37□□□□□ -1.07
Vps54-202ENSMUST00000109578 Pdzd2E9Q1M1 2796 aa8.37□□□□□ -1.07
Vps54-202ENSMUST00000109578 P01896 185 aa8.37□□□□□ -1.07
Vps54-202ENSMUST00000109578 Defb18Q30KP5 85 aa8.37□□□□□ -1.07
Vps54-202ENSMUST00000109578 Ube2e2Q91W82 201 aa8.37□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 52.2 ms