RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Zfp407G3UVV3 2246 aa7.81□□□□□ -1.16
Lig4-201ENSMUST00000095476 Ighv1-11A0A0A6YWI9 117 aa7.81□□□□□ -1.16
Lig4-201ENSMUST00000095476 Igkv4-78A0A0A6YYE5 119 aa7.81□□□□□ -1.16
Lig4-201ENSMUST00000095476 Fxyd5P97808 178 aa7.81□□□□□ -1.16
Lig4-201ENSMUST00000095476 Cdip1Q9DB75 208 aa7.81□□□□□ -1.16
Lig4-201ENSMUST00000095476 Wfdc15bQ9JHY4 80 aa7.81□□□□□ -1.16
Lig4-201ENSMUST00000095476 Spry4Q9WTP2 300 aa7.81□□□□□ -1.16
Lig4-201ENSMUST00000095476 Alms1Q8K4E0 3251 aa7.81□□□□□ -1.16
Lig4-201ENSMUST00000095476 E030018B13RikJ3QMS9 113 aa7.81□□□□□ -1.16
Lig4-201ENSMUST00000095476 Rpl35aO55142 110 aa7.81□□□□□ -1.16
Lig4-201ENSMUST00000095476 Odf1Q61999 247 aa7.81□□□□□ -1.16
Lig4-201ENSMUST00000095476 Timm17bQ9Z0V7 172 aa7.81□□□□□ -1.16
Lig4-201ENSMUST00000095476 Ighv1-12A0A0A6YXJ9 117 aa7.8□□□□□ -1.16
Lig4-201ENSMUST00000095476 Ube2d3P61079 147 aa7.8□□□□□ -1.16
Lig4-201ENSMUST00000095476 Ube2d1P61080 147 aaKnown RBP7.8□□□□□ -1.16
Lig4-201ENSMUST00000095476 Ube2d2P62838 147 aa7.8□□□□□ -1.16
Lig4-201ENSMUST00000095476 AW146154Q3TPQ7 468 aa7.8□□□□□ -1.16
Lig4-201ENSMUST00000095476 Igkv4-58A0A0G2JGI6 119 aa7.8□□□□□ -1.16
Lig4-201ENSMUST00000095476 Igkv3-9A0A140T8P4 119 aa7.8□□□□□ -1.16
Lig4-201ENSMUST00000095476 Dad1P61804 113 aa7.8□□□□□ -1.16
Lig4-201ENSMUST00000095476 Igkv4-79A0A075B5L8 119 aa7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 Igkv3-1A0A075B5P1 119 aa7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 Ighv1-61P01749 117 aa7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 Cela2aP05208 271 aa7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 Smr3aQ61900 147 aa7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 Msrb2Q78J03 175 aa7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 Tet2Q4JK59 1912 aaKnown RBP7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 Igkv2-109A0A075B5K6 120 aa7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 Reg3gO09049 174 aa7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 Gm9958Q8C9U4 106 aa7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 Igkv4-74A0A0B4J1I3 119 aa7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 FcorP0DJI6 106 aa7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 Pcnx3Q8VI59 2028 aa7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 Ptprz1B9EKR1 2312 aa7.79□□□□□ -1.16
Lig4-201ENSMUST00000095476 Ighv1-75A0A075B5Y2 117 aa7.78□□□□□ -1.16
Lig4-201ENSMUST00000095476 Gm3618D3Z4P5 127 aa7.78□□□□□ -1.16
Lig4-201ENSMUST00000095476 P06328 117 aa7.78□□□□□ -1.16
Lig4-201ENSMUST00000095476 Gm2916Q9D9B9 127 aa7.78□□□□□ -1.16
Lig4-201ENSMUST00000095476 Ep300B2RWS6 2412 aa7.78□□□□□ -1.16
Lig4-201ENSMUST00000095476 Trav13n-2A0A0G2JF93 110 aa7.78□□□□□ -1.16
Lig4-201ENSMUST00000095476 Spink13Q3UTS8 97 aa7.78□□□□□ -1.16
Lig4-201ENSMUST00000095476 Gvin1Q80SU7 2427 aa7.78□□□□□ -1.16
Lig4-201ENSMUST00000095476 Pde6gP09174 87 aa7.78□□□□□ -1.16
Lig4-201ENSMUST00000095476 CnfnQ6PCW6 111 aa7.78□□□□□ -1.16
Lig4-201ENSMUST00000095476 Pcnx2Q5DU28 2122 aa7.78□□□□□ -1.16
Lig4-201ENSMUST00000095476 Ighv3-1A0A075B5S6 116 aa7.77□□□□□ -1.16
Lig4-201ENSMUST00000095476 Sh2d1aO88890 126 aa7.77□□□□□ -1.16
Lig4-201ENSMUST00000095476 Csdc2Q91YQ3 154 aa7.77□□□□□ -1.17
Lig4-201ENSMUST00000095476 Ly6hQ9WUC3 139 aa7.77□□□□□ -1.17
Lig4-201ENSMUST00000095476 AgrnA2ASQ1 1950 aa7.77□□□□□ -1.17
Lig4-201ENSMUST00000095476 Eml6Q5SQM0 1958 aa7.77□□□□□ -1.17
Lig4-201ENSMUST00000095476 Col8a2P25318 699 aa7.77□□□□□ -1.17
Lig4-201ENSMUST00000095476 EnhoQ8K1D8 76 aa7.77□□□□□ -1.17
Lig4-201ENSMUST00000095476 Spry2Q9QXV8 315 aa7.77□□□□□ -1.17
Lig4-201ENSMUST00000095476 HelzQ6DFV5 1964 aaKnown RBP7.76□□□□□ -1.17
Lig4-201ENSMUST00000095476 PcntP48725 2898 aa7.76□□□□□ -1.17
Lig4-201ENSMUST00000095476 Gm17472A0A075B683 117 aa7.76□□□□□ -1.17
Lig4-201ENSMUST00000095476 Trav9n-2A0A0G2JDP3 113 aa7.76□□□□□ -1.17
Lig4-201ENSMUST00000095476 Sec16aA2AIX1 2377 aa7.76□□□□□ -1.17
Lig4-201ENSMUST00000095476 Gm10542F6XDR3 90 aa7.76□□□□□ -1.17
Lig4-201ENSMUST00000095476 Ucn2Q99ML8 113 aa7.76□□□□□ -1.17
Lig4-201ENSMUST00000095476 Rai1Q61818 1889 aa7.75□□□□□ -1.17
Lig4-201ENSMUST00000095476 B430305J03RikQ8BQQ8 176 aa7.75□□□□□ -1.17
Lig4-201ENSMUST00000095476 Rpl39lQ9CQD0 51 aa7.75□□□□□ -1.17
Lig4-201ENSMUST00000095476 Notch3Q61982 2318 aa7.75□□□□□ -1.17
Lig4-201ENSMUST00000095476 Ighv1-85A0A075B5Y6 117 aa7.75□□□□□ -1.17
Lig4-201ENSMUST00000095476 Dand5Q76LW6 185 aa7.75□□□□□ -1.17
Lig4-201ENSMUST00000095476 Defb12Q8K4N3 78 aa7.75□□□□□ -1.17
Lig4-201ENSMUST00000095476 SrarpQ3ULG3 163 aa7.74□□□□□ -1.17
Lig4-201ENSMUST00000095476 Fam19a5Q91WE9 132 aa7.74□□□□□ -1.17
Lig4-201ENSMUST00000095476 Rif1Q6PR54 2419 aaKnown RBP7.74□□□□□ -1.17
Lig4-201ENSMUST00000095476 Trav9-2A0A075B647 113 aa7.74□□□□□ -1.17
Lig4-201ENSMUST00000095476 Trav9-4A0A0B4J1K2 113 aa7.74□□□□□ -1.17
Lig4-201ENSMUST00000095476 Klk12B2RVZ0 247 aa7.74□□□□□ -1.17
Lig4-201ENSMUST00000095476 Trav9d-3A0A075B695 113 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 Ighv2-6-8A0A0A6YWY9 116 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 P01747 120 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 Trav13-1A0A075B644 110 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 Ighv1-82A0A0G2JEU7 117 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 Gm9970F6ZED4 185 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 CrygdP04342 174 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 5730596B20RikQ8BQ08 205 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 Q99M08 65 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 TroQ6DIC6 2087 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 Fam208bQ5DTT3 2382 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 2310009B15RikA0A0A6YWI4 143 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 1520401A03RikA0A0J9YVH6 598 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 TshbP12656 138 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 Eif4ebp1Q60876 117 aa7.73□□□□□ -1.17
Lig4-201ENSMUST00000095476 Gm7257D3YX25 99 aa7.72□□□□□ -1.17
Lig4-201ENSMUST00000095476 Gm16223Q8CBM3 117 aa7.72□□□□□ -1.17
Lig4-201ENSMUST00000095476 Spink4O35679 86 aa7.72□□□□□ -1.17
Lig4-201ENSMUST00000095476 Prop1P97458 223 aa7.72□□□□□ -1.17
Lig4-201ENSMUST00000095476 Leap2Q91V13 76 aa7.72□□□□□ -1.17
Lig4-201ENSMUST00000095476 Ighv1-58A0A075B5W9 117 aa7.72□□□□□ -1.17
Lig4-201ENSMUST00000095476 Gm10553J3QPF1 123 aa7.72□□□□□ -1.17
Lig4-201ENSMUST00000095476 A130051J06RikQ8CAU1 227 aa7.72□□□□□ -1.17
Lig4-201ENSMUST00000095476 Cyyr1Q8VIH7 165 aa7.72□□□□□ -1.17
Lig4-201ENSMUST00000095476 Nop10Q9CQS2 64 aa7.72□□□□□ -1.17
Lig4-201ENSMUST00000095476 Fer1l4A3KGK3 1992 aa7.72□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms