RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Rpgrip1Q9EPQ2 1331 aa17.42■□□□□ 0.38
Lig4-201ENSMUST00000095476 Rhox8Q6VSS7 320 aa17.39■□□□□ 0.37
Lig4-201ENSMUST00000095476 Las1lA2BE28 776 aaKnown RBP16.72■□□□□ 0.27
Lig4-201ENSMUST00000095476 Cngb1E1AZ71 1325 aa16.41■□□□□ 0.22
Lig4-201ENSMUST00000095476 Ehmt2Q9Z148 1263 aaKnown RBP16.39■□□□□ 0.21
Lig4-201ENSMUST00000095476 Acin1Q9JIX8 1338 aaKnown RBP16.07■□□□□ 0.16
Lig4-201ENSMUST00000095476 Pelp1Q9DBD5 1123 aaKnown RBP15.93■□□□□ 0.14
Lig4-201ENSMUST00000095476 CenpbP27790 599 aa15.9■□□□□ 0.14
Lig4-201ENSMUST00000095476 Zeb1Q64318 1117 aa15.89■□□□□ 0.13
Lig4-201ENSMUST00000095476 Wdr66E9Q743 1299 aa15.88■□□□□ 0.13
Lig4-201ENSMUST00000095476 Myt1Q8CFC2 1127 aa15.83■□□□□ 0.12
Lig4-201ENSMUST00000095476 Pcgf6Q99NA9 353 aa15.76■□□□□ 0.11
Lig4-201ENSMUST00000095476 NefmP08553 848 aa15.51■□□□□ 0.07
Lig4-201ENSMUST00000095476 Ccdc136Q3TVA9 1136 aa15.47■□□□□ 0.07
Lig4-201ENSMUST00000095476 NischQ80TM9 1593 aa15.42■□□□□ 0.06
Lig4-201ENSMUST00000095476 Amer1Q7TS75 1132 aa15.39■□□□□ 0.05
Lig4-201ENSMUST00000095476 Trim41Q5NCC3 630 aa15.37■□□□□ 0.05
Lig4-201ENSMUST00000095476 Ccdc180J3QNE4 1664 aa15.37■□□□□ 0.05
Lig4-201ENSMUST00000095476 Cdk11bP24788 784 aaKnown RBP15.32■□□□□ 0.04
Lig4-201ENSMUST00000095476 Supt5hO55201 1082 aaKnown RBP15.29■□□□□ 0.04
Lig4-201ENSMUST00000095476 Gab3Q8BSM5 595 aa15.28■□□□□ 0.04
Lig4-201ENSMUST00000095476 DiexfQ8BTT6 772 aaKnown RBP15.28■□□□□ 0.04
Lig4-201ENSMUST00000095476 HrcG5E8J6 738 aa15.2■□□□□ 0.02
Lig4-201ENSMUST00000095476 Stra8P70278 393 aa15.19■□□□□ 0.02
Lig4-201ENSMUST00000095476 Rtl1Q7M732 1744 aa15.13■□□□□ 0.01
Lig4-201ENSMUST00000095476 Nop58Q6DFW4 536 aaKnown RBP15.13■□□□□ 0.01
Lig4-201ENSMUST00000095476 Tnnt3Q9QZ47 272 aa15.09■□□□□ 0.01
Lig4-201ENSMUST00000095476 Neurod1Q60867 357 aa15.02■□□□□ -0
Lig4-201ENSMUST00000095476 Abcc9P70170 1546 aa15.02□□□□□ -0.01
Lig4-201ENSMUST00000095476 Ttbk1Q6PCN3 1308 aa15.01□□□□□ -0.01
Lig4-201ENSMUST00000095476 Rtl5Q5DTT4 599 aa14.99□□□□□ -0.01
Lig4-201ENSMUST00000095476 UbtfP25976 765 aaKnown RBP14.98□□□□□ -0.01
Lig4-201ENSMUST00000095476 Esf1Q3V1V3 845 aaKnown RBP14.97□□□□□ -0.01
Lig4-201ENSMUST00000095476 Ube2uB1AUC4 352 aa14.94□□□□□ -0.02
Lig4-201ENSMUST00000095476 Myt1lP97500 1187 aa14.86□□□□□ -0.03
Lig4-201ENSMUST00000095476 Anks4bQ8K3X6 423 aa14.85□□□□□ -0.03
Lig4-201ENSMUST00000095476 4933416C03RikQ3V063 378 aa14.84□□□□□ -0.03
Lig4-201ENSMUST00000095476 Npm2Q80W85 207 aa14.83□□□□□ -0.03
Lig4-201ENSMUST00000095476 Slc24a1Q91WD8 1130 aa14.83□□□□□ -0.04
Lig4-201ENSMUST00000095476 Aplp2Q06335 707 aa14.8□□□□□ -0.04
Lig4-201ENSMUST00000095476 Csrnp3P59055 597 aa14.78□□□□□ -0.04
Lig4-201ENSMUST00000095476 Ppargc1bQ8VHJ7 1014 aa14.74□□□□□ -0.05
Lig4-201ENSMUST00000095476 Anp32aO35381 247 aa14.7□□□□□ -0.06
Lig4-201ENSMUST00000095476 Mier1Q5UAK0 511 aa14.67□□□□□ -0.06
Lig4-201ENSMUST00000095476 ClspnQ80YR7 1315 aa14.66□□□□□ -0.06
Lig4-201ENSMUST00000095476 4930567H17RikQ3V0K5 233 aa14.66□□□□□ -0.06
Lig4-201ENSMUST00000095476 TonslQ6NZL6 1363 aa14.64□□□□□ -0.07
Lig4-201ENSMUST00000095476 Gm35339A0A140LHH9 1649 aa14.63□□□□□ -0.07
Lig4-201ENSMUST00000095476 Sall2Q9QX96 1004 aa14.61□□□□□ -0.07
Lig4-201ENSMUST00000095476 Dcaf1Q80TR8 1506 aa14.6□□□□□ -0.07
Lig4-201ENSMUST00000095476 Gm38655A0A286YDK6 273 aa14.6□□□□□ -0.07
Lig4-201ENSMUST00000095476 1700123L14RikQ3V2K7 440 aa14.59□□□□□ -0.07
Lig4-201ENSMUST00000095476 NrdcQ8BHG1 1161 aa14.54□□□□□ -0.08
Lig4-201ENSMUST00000095476 Eif5bQ05D44 1216 aaKnown RBP14.53□□□□□ -0.08
Lig4-201ENSMUST00000095476 Abcc8B2RUS7 1588 aa14.52□□□□□ -0.08
Lig4-201ENSMUST00000095476 NclP09405 707 aaKnown RBP14.5□□□□□ -0.09
Lig4-201ENSMUST00000095476 NeflP08551 543 aa14.46□□□□□ -0.09
Lig4-201ENSMUST00000095476 Bcl11aQ9QYE3 773 aa14.39□□□□□ -0.11
Lig4-201ENSMUST00000095476 DaxxO35613 739 aa14.38□□□□□ -0.11
Lig4-201ENSMUST00000095476 Anp32bQ9EST5 272 aaKnown RBP14.3□□□□□ -0.12
Lig4-201ENSMUST00000095476 Ccdc9Q8VC31 543 aaKnown RBP14.28□□□□□ -0.12
Lig4-201ENSMUST00000095476 Fam71e1A1L3C1 212 aa14.26□□□□□ -0.13
Lig4-201ENSMUST00000095476 Fam50aQ9WV03 339 aaKnown RBP14.26□□□□□ -0.13
Lig4-201ENSMUST00000095476 Calr4Q3TQS0 420 aa14.21□□□□□ -0.13
Lig4-201ENSMUST00000095476 Mapk8ip2Q9ERE9 830 aa14.21□□□□□ -0.13
Lig4-201ENSMUST00000095476 Ppp4r2Q0VGB7 417 aa14.15□□□□□ -0.14
Lig4-201ENSMUST00000095476 Hsp90aa1P07901 733 aaKnown RBP14.12□□□□□ -0.15
Lig4-201ENSMUST00000095476 Ap3b1Q9Z1T1 1105 aa14.12□□□□□ -0.15
Lig4-201ENSMUST00000095476 Cep164Q5DU05 1446 aa14.1□□□□□ -0.15
Lig4-201ENSMUST00000095476 Wdr43Q6ZQL4 677 aaKnown RBP14.09□□□□□ -0.15
Lig4-201ENSMUST00000095476 Zcchc6Q5BLK4 1491 aaKnown RBP14.05□□□□□ -0.16
Lig4-201ENSMUST00000095476 Aebp2Q9Z248 504 aaKnown RBP14□□□□□ -0.17
Lig4-201ENSMUST00000095476 Plekhg3Q4VAC9 1341 aa14□□□□□ -0.17
Lig4-201ENSMUST00000095476 Ccdc27Q3V036 639 aa13.99□□□□□ -0.17
Lig4-201ENSMUST00000095476 Eid3Q3V124 375 aa13.97□□□□□ -0.17
Lig4-201ENSMUST00000095476 Il27Q8K3I6 234 aa13.92□□□□□ -0.18
Lig4-201ENSMUST00000095476 Irx3P81067 507 aa13.9□□□□□ -0.18
Lig4-201ENSMUST00000095476 Ythdc1E9Q5K9 736 aaKnown RBP13.89□□□□□ -0.19
Lig4-201ENSMUST00000095476 Hnrnpul2Q00PI9 745 aaKnown RBP13.88□□□□□ -0.19
Lig4-201ENSMUST00000095476 SafbD3YXK2 937 aaKnown RBP13.87□□□□□ -0.19
Lig4-201ENSMUST00000095476 Chic1Q8CBW7 227 aa13.82□□□□□ -0.2
Lig4-201ENSMUST00000095476 Upf2A2AT37 1269 aaKnown RBP13.81□□□□□ -0.2
Lig4-201ENSMUST00000095476 NacadQ5SWP3 1504 aa13.79□□□□□ -0.2
Lig4-201ENSMUST00000095476 Clip1Q922J3 1391 aa13.78□□□□□ -0.2
Lig4-201ENSMUST00000095476 ArxO35085 564 aa13.78□□□□□ -0.2
Lig4-201ENSMUST00000095476 Mrs2Q5NCE8 434 aa13.77□□□□□ -0.2
Lig4-201ENSMUST00000095476 Ccer2J3QPU5 274 aa13.76□□□□□ -0.21
Lig4-201ENSMUST00000095476 CanxP35564 591 aaKnown RBP13.74□□□□□ -0.21
Lig4-201ENSMUST00000095476 Lmod2Q3UHZ5 550 aa13.73□□□□□ -0.21
Lig4-201ENSMUST00000095476 Os9Q8K2C7 672 aa13.71□□□□□ -0.21
Lig4-201ENSMUST00000095476 PrkcshO08795 521 aa13.68□□□□□ -0.22
Lig4-201ENSMUST00000095476 Trim44Q9QXA7 346 aa13.67□□□□□ -0.22
Lig4-201ENSMUST00000095476 Supt16hQ920B9 1047 aa13.64□□□□□ -0.23
Lig4-201ENSMUST00000095476 Kdm5dQ62240 1548 aa13.63□□□□□ -0.23
Lig4-201ENSMUST00000095476 Gtf3c3Q3TMP1 882 aa13.61□□□□□ -0.23
Lig4-201ENSMUST00000095476 Lmod3E9QA62 571 aa13.61□□□□□ -0.23
Lig4-201ENSMUST00000095476 AU015836B2RUM3 263 aa13.61□□□□□ -0.23
Lig4-201ENSMUST00000095476 Htatsf1Q8BGC0 757 aa13.59□□□□□ -0.23
Lig4-201ENSMUST00000095476 P3h3Q8CG70 732 aa13.59□□□□□ -0.23
Lig4-201ENSMUST00000095476 ScribQ80U72 1612 aa13.59□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms