RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Gm10226O88253 85 aa7.26□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Ifitm10Q8BR26 201 aa7.26□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Mrpl35Q9CQL6 188 aa7.26□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Ighv2-7A0A075B5Q8 116 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Tcrg-C1A0A075B5Z0 172 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Lect2O88803 151 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 P01896 185 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Dmrt3Q80WT2 476 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Cryba4Q9JJV0 196 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Igfn1Q3KNY0 2849 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Trav4n-4A0A075B615 110 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Ighv8-5A0A0A6YY60 119 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 P01802 115 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Ube2d3P61079 147 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Snrpd3P62320 126 aaKnown RBP7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Ube2d2P62838 147 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Fam19a4Q7TPG5 135 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Mpv17l2Q8VIK2 200 aa7.25□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Igkv4-62A0A0G2JDW9 117 aa7.24□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Pglyrp1O88593 182 aa7.24□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 P01753 117 aa7.24□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Il1f10Q8R459 152 aa7.24□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Ighv1-58A0A075B5W9 117 aa7.24□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Ighv2-3A0A075B696 115 aa7.24□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Trbv16A0A0B4J1H3 115 aa7.24□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Gm11444F6QMA6 170 aa7.24□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Tac4Q99N14 128 aa7.24□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Timm17aQ9Z0V8 171 aa7.24□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Defb47Q30KN1 79 aa7.24□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Pip4p1Q3TWL2 284 aa7.24□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 1810032O08RikE9PZV8 113 aa7.23□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Gm933J3QPC1 141 aa7.23□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Smr3aQ61900 147 aa7.23□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Cited2O35740 269 aa7.23□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Cdip1Q9DB75 208 aa7.23□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Crip2Q9DCT8 208 aaKnown RBP7.23□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Nf1Q04690 2841 aa7.23□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Gm9925F6T2U3 160 aa7.23□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Lrcol1Q3URS3 161 aa7.23□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 LystP97412 3788 aa7.23□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 BC067074F6RXI4 2391 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Gm21994F6T2D2 329 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 LeprotO89013 131 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Rpl32P62911 135 aaKnown RBP7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Morn5Q9DAI9 170 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Tmem263Q9DAM7 115 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Ighv1-52A0A0A6YXC3 117 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Arid1bE9Q4N7 2244 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Gm37988J3QM41 62 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 TtrP07309 147 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Cks1bP61025 79 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 AI854703Q8BIN3 203 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Atp5lQ9CPQ8 103 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Mfap4Q9D1H9 257 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Dynlrb2Q9DAJ5 96 aa7.22□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Chd6A3KFM7 2711 aa7.21□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Myo9aQ8C170 2542 aa7.21□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Ighv1-85A0A075B5Y6 117 aa7.21□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 BC048562Q80ZQ7 204 aa7.21□□□□□ -1.25
Ccdc40-202ENSMUST00000053440 Gm20730A0A075B5J6 119 aa7.21□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 NpwA0A1L1STR8 176 aa7.21□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Gm9513B3GLJ6 99 aa7.21□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Brwd1Q921C3 2304 aa7.2□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Rmi2Q3UPE3 149 aa7.2□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Synj2bpQ9D6K5 145 aa7.2□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Gm10135F6TEE5 83 aa7.19□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Gm10490F6VBM2 120 aa7.19□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Cfc1P97766 202 aa7.19□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Anapc13Q8R034 74 aa7.19□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Cyyr1Q8VIH7 165 aa7.19□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Krtap26-1Q9D7N2 215 aa7.19□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 P84751 237 aa7.19□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Atp6v0e2Q91XE7 81 aa7.19□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Trav13d-1A0A075B606 110 aa7.19□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Bri3P28662 125 aa7.19□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Q9DAQ5 155 aa7.19□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Ighv1-63A0A075B5X2 117 aa7.18□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Trav7d-3Q5R1I1 112 aa7.18□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 A530064D06RikQ8BNV8 229 aa7.18□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Znf580Q9DB38 172 aa7.18□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Igkv4-91A0A075B5L2 119 aa7.18□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 AngP21570 145 aa7.18□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Cfap126Q6P8X9 189 aa7.18□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Muc2Q80Z19 2680 aa7.17□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Ighv1-5A0A0A6YWG2 117 aa7.17□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 B230217C12RikE9Q3Z1 139 aa7.17□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Reg3gO09049 174 aa7.17□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Gm11020F6ZGD5 61 aa7.17□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Rpl32-psP17932 135 aa7.17□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Gm17455G3UW87 128 aa7.17□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Gm29423A0A087WRM1 55 aa7.16□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 A930009A15RikG3UYI6 118 aa7.16□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Ifi27l2aQ8R412 90 aa7.16□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Phlda3Q9WV95 125 aa7.16□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 4930564D02RikQ9D4S4 103 aa7.15□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Fam216aQ9DB54 251 aa7.15□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Scgb1b24B1B0N6 92 aa7.15□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Hivep2Q3UHF7 2430 aa7.15□□□□□ -1.26
Ccdc40-202ENSMUST00000053440 Trav9n-2A0A0G2JDP3 113 aa7.15□□□□□ -1.27
Ccdc40-202ENSMUST00000053440 4930415O20RikQ8CDT5 131 aa7.15□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms