RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 TtrP07309 147 aa8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 Defb47Q30KN1 79 aa8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 Ndufa4Q62425 82 aaKnown RBP8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 Atp6v0e2Q91XE7 81 aa8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 Ndufa3Q9CQ91 84 aa8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 Leap2Q91V13 76 aa8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 Spata25Q9DA57 226 aa8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 FasnP19096 2504 aaKnown RBP8.26□□□□□ -1.09
Msh3-201ENSMUST00000022220 Sdhaf1Q3U276 118 aa8.25□□□□□ -1.09
Msh3-201ENSMUST00000022220 B430305J03RikQ8BQQ8 176 aa8.25□□□□□ -1.09
Msh3-201ENSMUST00000022220 P01837 106 aa8.25□□□□□ -1.09
Msh3-201ENSMUST00000022220 Iah1Q9DB29 249 aa8.25□□□□□ -1.09
Msh3-201ENSMUST00000022220 Ighv2-7A0A075B5Q8 116 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Gm5941Q497P9 117 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Mrps12O35680 139 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 P01748 117 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Smim1P0C8K7 78 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Defb2P82020 71 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Olfr313Q5NC55 308 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Cdip1Q9DB75 208 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Ighv1-50A0A075B5W1 117 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Ighv1-23A0A0A6YVW3 117 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Gm10251J3QPM5 127 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Znf239P24399 201 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Cox6cQ9CPQ1 76 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Synj2bpQ9D6K5 145 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Q9DAQ5 155 aa8.24□□□□□ -1.09
Msh3-201ENSMUST00000022220 Sprr3O09116 238 aa8.23□□□□□ -1.09
Msh3-201ENSMUST00000022220 Foxi2Q3I5G5 311 aa8.23□□□□□ -1.09
Msh3-201ENSMUST00000022220 Rbmy1bQ60990 380 aa8.23□□□□□ -1.09
Msh3-201ENSMUST00000022220 Prp2P05143 317 aa8.23□□□□□ -1.09
Msh3-201ENSMUST00000022220 RhohQ9D3G9 191 aa8.23□□□□□ -1.09
Msh3-201ENSMUST00000022220 Snai3Q9QY31 287 aa8.23□□□□□ -1.09
Msh3-201ENSMUST00000022220 Col5a1O88207 1838 aa8.23□□□□□ -1.09
Msh3-201ENSMUST00000022220 C920008G01RikA0A0B4J1N1 112 aa8.23□□□□□ -1.09
Msh3-201ENSMUST00000022220 Notch1Q01705 2531 aa8.23□□□□□ -1.09
Msh3-201ENSMUST00000022220 Ighv1-52A0A0A6YXC3 117 aa8.22□□□□□ -1.09
Msh3-201ENSMUST00000022220 Pla2g2dQ9WVF6 144 aa8.22□□□□□ -1.09
Msh3-201ENSMUST00000022220 Akap13E9Q394 2776 aa8.22□□□□□ -1.09
Msh3-201ENSMUST00000022220 Rpl32-psP17932 135 aa8.22□□□□□ -1.09
Msh3-201ENSMUST00000022220 Ube2wQ8VDW4 151 aa8.22□□□□□ -1.09
Msh3-201ENSMUST00000022220 Triap1Q9D8Z2 76 aa8.22□□□□□ -1.09
Msh3-201ENSMUST00000022220 Gm815Q3UWS2 115 aa8.22□□□□□ -1.09
Msh3-201ENSMUST00000022220 Gm10295Q8CCF3 114 aa8.22□□□□□ -1.09
Msh3-201ENSMUST00000022220 Higd1aQ9JLR9 95 aa8.22□□□□□ -1.09
Msh3-201ENSMUST00000022220 Gm11020F6ZGD5 61 aa8.21□□□□□ -1.09
Msh3-201ENSMUST00000022220 Ndufa4l2Q4FZG9 87 aa8.21□□□□□ -1.09
Msh3-201ENSMUST00000022220 Defa25Q5G864 92 aa8.21□□□□□ -1.09
Msh3-201ENSMUST00000022220 Il19Q8CJ70 176 aa8.21□□□□□ -1.09
Msh3-201ENSMUST00000022220 Tmem101Q91VP7 257 aa8.21□□□□□ -1.09
Msh3-201ENSMUST00000022220 Olfr311Q5NC59 308 aa8.21□□□□□ -1.1
Msh3-201ENSMUST00000022220 Trav9n-2A0A0G2JDP3 113 aa8.21□□□□□ -1.1
Msh3-201ENSMUST00000022220 P01786 117 aa8.21□□□□□ -1.1
Msh3-201ENSMUST00000022220 Tomm7Q9D173 55 aa8.21□□□□□ -1.1
Msh3-201ENSMUST00000022220 Gm17455G3UW87 128 aa8.2□□□□□ -1.1
Msh3-201ENSMUST00000022220 Lect2O88803 151 aa8.2□□□□□ -1.1
Msh3-201ENSMUST00000022220 Lgals4Q8K419 326 aa8.2□□□□□ -1.1
Msh3-201ENSMUST00000022220 Trav4n-4A0A075B615 110 aa8.2□□□□□ -1.1
Msh3-201ENSMUST00000022220 1810032O08RikE9PZV8 113 aa8.2□□□□□ -1.1
Msh3-201ENSMUST00000022220 Ighv1-49A0A0A6YWX2 117 aa8.19□□□□□ -1.1
Msh3-201ENSMUST00000022220 Ighv12-3A0A075B5T1 117 aa8.19□□□□□ -1.1
Msh3-201ENSMUST00000022220 P01753 117 aa8.19□□□□□ -1.1
Msh3-201ENSMUST00000022220 F11rO88792 300 aa8.19□□□□□ -1.1
Msh3-201ENSMUST00000022220 Hoxd3P09027 433 aa8.19□□□□□ -1.1
Msh3-201ENSMUST00000022220 Defa4P28311 92 aa8.19□□□□□ -1.1
Msh3-201ENSMUST00000022220 Rpl39P62892 51 aa8.19□□□□□ -1.1
Msh3-201ENSMUST00000022220 Gm16223Q8CBM3 117 aa8.18□□□□□ -1.1
Msh3-201ENSMUST00000022220 Tmem263Q9DAM7 115 aa8.18□□□□□ -1.1
Msh3-201ENSMUST00000022220 Rpl32P62911 135 aaKnown RBP8.18□□□□□ -1.1
Msh3-201ENSMUST00000022220 Foxc1Q61572 553 aa8.18□□□□□ -1.1
Msh3-201ENSMUST00000022220 Prr13Q9CQJ5 137 aa8.18□□□□□ -1.1
Msh3-201ENSMUST00000022220 Mast4Q811L6 2618 aa8.18□□□□□ -1.1
Msh3-201ENSMUST00000022220 Trav7-6A0A075B640 112 aa8.18□□□□□ -1.1
Msh3-201ENSMUST00000022220 Gm904Q3V2L5 102 aa8.18□□□□□ -1.1
Msh3-201ENSMUST00000022220 Tmem14cQ9CQN6 114 aa8.18□□□□□ -1.1
Msh3-201ENSMUST00000022220 P01738 130 aa8.17□□□□□ -1.1
Msh3-201ENSMUST00000022220 Ighv8-5A0A0A6YY60 119 aa8.17□□□□□ -1.1
Msh3-201ENSMUST00000022220 Gm3250E9Q1M3 230 aa8.17□□□□□ -1.1
Msh3-201ENSMUST00000022220 Smrp1Q2MH31 260 aa8.17□□□□□ -1.1
Msh3-201ENSMUST00000022220 Bles03Q8VD62 251 aa8.17□□□□□ -1.1
Msh3-201ENSMUST00000022220 Fhl1P97447 280 aaKnown RBP8.16□□□□□ -1.1
Msh3-201ENSMUST00000022220 Ighv5-9-1A0A0A6YVS4 126 aa8.16□□□□□ -1.1
Msh3-201ENSMUST00000022220 Sslp1Q3UN54 99 aa8.16□□□□□ -1.1
Msh3-201ENSMUST00000022220 SpinklQ8CEK3 90 aa8.16□□□□□ -1.1
Msh3-201ENSMUST00000022220 Ankrd39Q9D2X0 183 aa8.16□□□□□ -1.1
Msh3-201ENSMUST00000022220 Wdr38Q9D994 303 aa8.16□□□□□ -1.1
Msh3-201ENSMUST00000022220 Itpr3P70227 2670 aa8.15□□□□□ -1.1
Msh3-201ENSMUST00000022220 OdaphJ3QNT8 126 aa8.15□□□□□ -1.1
Msh3-201ENSMUST00000022220 Morn5Q9DAI9 170 aa8.15□□□□□ -1.1
Msh3-201ENSMUST00000022220 FlncQ8VHX6 2726 aaKnown RBP8.15□□□□□ -1.1
Msh3-201ENSMUST00000022220 P01747 120 aa8.15□□□□□ -1.1
Msh3-201ENSMUST00000022220 SrarpQ3ULG3 163 aa8.15□□□□□ -1.1
Msh3-201ENSMUST00000022220 Znf740Q6NZQ6 180 aa8.15□□□□□ -1.1
Msh3-201ENSMUST00000022220 Fn1P11276 2477 aaKnown RBP8.15□□□□□ -1.1
Msh3-201ENSMUST00000022220 Stab1Q8R4Y4 2571 aa8.15□□□□□ -1.11
Msh3-201ENSMUST00000022220 NipblQ6KCD5 2798 aaKnown RBP8.15□□□□□ -1.11
Msh3-201ENSMUST00000022220 Atp5g3P56384 141 aa8.15□□□□□ -1.11
Msh3-201ENSMUST00000022220 Cyyr1Q8VIH7 165 aa8.15□□□□□ -1.11
Msh3-201ENSMUST00000022220 Phpt1Q9DAK9 124 aa8.15□□□□□ -1.11
Msh3-201ENSMUST00000022220 Rpl36aP83882 106 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 99.4 ms