RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Timm10bQ9WV96 100 aa10.25□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Tcf24V9GWT9 166 aa10.25□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Gm15294V9GXA7 121 aa10.25□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Gm17472A0A075B683 117 aa10.23□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Gm16442D3YZG3 307 aa10.23□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Vsig4F6TUL9 280 aa10.23□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Cox7a1P56392 80 aa10.23□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Pmis2Q497Q9 96 aa10.23□□□□□ -0.77
Ercc1-201ENSMUST00000003645 RnasekQ8K3C0 98 aa10.23□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Cst10Q9JM84 148 aa10.23□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Phlda3Q9WV95 125 aa10.23□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Gm10647E9Q8X0 124 aa10.22□□□□□ -0.77
Ercc1-201ENSMUST00000003645 SnrpeP62305 92 aaKnown RBP10.22□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Tnfsf18Q7TS55 173 aa10.22□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Zc2hc1bQ9D534 172 aa10.22□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Huwe1Q7TMY8 4377 aaKnown RBP10.21□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Dnah17Q69Z23 4481 aa10.21□□□□□ -0.77
Ercc1-201ENSMUST00000003645 Ighv8-5A0A0A6YY60 119 aa10.21□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Ceacam15A0A0B4J1L0 234 aa10.21□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Gm43218A0A0G2JGT0 114 aa10.21□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Gm9047B9EJX3 177 aa10.21□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Gm10271F6WY25 52 aa10.21□□□□□ -0.78
Ercc1-201ENSMUST00000003645 TtrP07309 147 aa10.21□□□□□ -0.78
Ercc1-201ENSMUST00000003645 PrcdQ00LT2 53 aa10.21□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Tmem136Q3TYE7 245 aa10.21□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Atp5lQ9CPQ8 103 aa10.21□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Gm17509Q9CZ61 145 aa10.21□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Atg101Q9D8Z6 218 aa10.21□□□□□ -0.78
Ercc1-201ENSMUST00000003645 RetnlaQ9EP95 111 aa10.21□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Gm42420A0A0J9YUQ2 99 aa10.2□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Gm9508A0A1W2P7W0 230 aa10.2□□□□□ -0.78
Ercc1-201ENSMUST00000003645 F11rO88792 300 aa10.2□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Dmrt3Q80WT2 476 aa10.2□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Gm9936Q8C864 160 aa10.2□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Pkd1l1Q8R526 2615 aa10.19□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Ighv8-13A0A075B5Y0 101 aa10.19□□□□□ -0.78
Ercc1-201ENSMUST00000003645 OdaphJ3QNT8 126 aa10.19□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Hist3h2bbQ8CGP0 126 aa10.19□□□□□ -0.78
Ercc1-201ENSMUST00000003645 SmagpQ99KC7 97 aa10.19□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Ube2cQ9D1C1 179 aa10.19□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Hist3h2baQ9D2U9 126 aa10.19□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Tex48Q9DA81 110 aa10.19□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Plpp2Q9DAX2 276 aa10.19□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Muc6Q80T03 2850 aa10.19□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Ighv8-11A0A075B5X4 119 aa10.18□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Tcrg-C1A0A075B5Z0 172 aa10.18□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Sertad4A7DTG3 377 aa10.18□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Gm10772F7AIG4 85 aa10.18□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Tcrg-C3L7N479 172 aa10.18□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Ormdl2Q9CQZ0 153 aa10.18□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Trav13-1A0A075B644 110 aa10.17□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Tmem238lA0A1B0GS74 79 aa10.17□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Esp3J3QN49 87 aa10.17□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Gm10842Q3U587 122 aa10.17□□□□□ -0.78
Ercc1-201ENSMUST00000003645 4930596D02RikQ3V0H9 216 aa10.17□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Clec4b2Q67DU8 208 aa10.17□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Pla2g2eQ9QUL3 142 aa10.17□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Igkv4-53A0A0G2JFC6 119 aa10.16□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Trbv13-2A0A140T8N6 113 aa10.16□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Gm13030A2APQ6 143 aa10.16□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Vmo1Q5SXG7 201 aa10.16□□□□□ -0.78
Ercc1-201ENSMUST00000003645 AplnQ9R0R4 77 aa10.16□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Trav6n-6A0A075B6B2 114 aa10.15□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Nat8b-psE0CYC6 232 aa10.15□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Gm10251J3QPM5 127 aa10.15□□□□□ -0.78
Ercc1-201ENSMUST00000003645 Bsph1Q3UW26 133 aa10.15□□□□□ -0.78
Ercc1-201ENSMUST00000003645 PrkdcP97313 4128 aa10.15□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Ighv2-6A0A075B6A7 116 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Rpl36-ps4A0A140T8U4 117 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 CrygaP04345 174 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Eif4ebp1Q60876 117 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 TirapQ99JY1 241 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 OtorQ9JIE3 128 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Ighv1-49A0A0A6YWX2 117 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Igkv4-78A0A0A6YYE5 119 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Igkv8-34A0A0G2JDU0 121 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 A0A1Y7VMQ4 148 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Sh2d1aO88890 126 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Hist1h2bfP10853 126 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Hist1h2bbQ64475 126 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Hist1h2bkQ8CGP1 126 aaKnown RBP10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Hist1h2bpQ8CGP2 126 aaKnown RBP10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Bles03Q8VD62 251 aa10.14□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Rpl39P62892 51 aa10.13□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Gm1968Q3T9I3 115 aa10.13□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Il1f10Q8R459 152 aa10.13□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Ifitm1Q9D103 106 aa10.13□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Slc25a20Q9Z2Z6 301 aaKnown RBP10.13□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Gm28044L7N1X0 119 aa10.12□□□□□ -0.79
Ercc1-201ENSMUST00000003645 P01729 129 aa10.12□□□□□ -0.79
Ercc1-201ENSMUST00000003645 NpyP57774 97 aa10.12□□□□□ -0.79
Ercc1-201ENSMUST00000003645 BC025920Q3US60 128 aa10.12□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Atp6v0e2Q91XE7 81 aa10.12□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Klk5Q9D140 293 aa10.12□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Tenm2Q9WTS5 2764 aa10.11□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Csmd3Q80T79 3707 aa10.11□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Gm12057A0A087WR21 115 aa10.11□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Spink1P09036 80 aa10.11□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Q3UNZ8 350 aa10.11□□□□□ -0.79
Ercc1-201ENSMUST00000003645 Psors1c2Q80ZC9 134 aa10.1□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms