RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Trav9-2A0A075B647 113 aa13.61□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Trav9-4A0A0B4J1K2 113 aa13.61□□□□□ -0.23
Pcf11-201ENSMUST00000119954 B9d2Q3UK10 175 aa13.61□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Trav13d-1A0A075B606 110 aa13.61□□□□□ -0.23
Pcf11-201ENSMUST00000119954 PrcdQ00LT2 53 aa13.6□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Zfp646Q6NV66 1788 aa13.6□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Cox7b2Q9D2H1 82 aa13.6□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Ralgapa2A3KGS3 1872 aa13.6□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Trav13d-4A0A0G2JFX3 110 aa13.6□□□□□ -0.23
Pcf11-201ENSMUST00000119954 9230102O04RikA2ASX7 82 aa13.6□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Rnf138Q9CQE0 245 aaKnown RBP13.6□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Dazap2Q9DCP9 168 aa13.6□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Ighv8-12A0A0G2JDE1 119 aa13.6□□□□□ -0.23
Pcf11-201ENSMUST00000119954 P04940 107 aa13.6□□□□□ -0.23
Pcf11-201ENSMUST00000119954 P04941 107 aa13.6□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Sptan1P16546 2472 aaKnown RBP13.59□□□□□ -0.23
Pcf11-201ENSMUST00000119954 LoxP28301 411 aa13.59□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Camk2n2Q78WH7 79 aa13.59□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Ramp1Q9WTJ5 148 aa13.59□□□□□ -0.23
Pcf11-201ENSMUST00000119954 P01630 113 aa13.59□□□□□ -0.23
Pcf11-201ENSMUST00000119954 P01745 121 aa13.59□□□□□ -0.23
Pcf11-201ENSMUST00000119954 GrnP28798 589 aaKnown RBP13.59□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Rpl18aP62717 176 aaKnown RBP13.59□□□□□ -0.23
Pcf11-201ENSMUST00000119954 AcacaQ5SWU9 2345 aa13.59□□□□□ -0.23
Pcf11-201ENSMUST00000119954 MpdzQ8VBX6 2055 aa13.59□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Gm17359A0A0G2JEB7 487 aa13.58□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Klk9Q32M27 251 aa13.58□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Plxna1P70206 1894 aa13.57□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Trav13-1A0A075B644 110 aa13.57□□□□□ -0.24
Pcf11-201ENSMUST00000119954 ColqO35348 457 aa13.57□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Trbv16A0A0B4J1H3 115 aa13.57□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Edn2P22389 175 aa13.57□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Ebi3O35228 228 aa13.56□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Tmem223Q9CQE2 199 aaKnown RBP13.56□□□□□ -0.24
Pcf11-201ENSMUST00000119954 P04942 107 aa13.56□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Bdp1Q571C7 2467 aa13.56□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Iglv1A0A075B663 117 aa13.56□□□□□ -0.24
Pcf11-201ENSMUST00000119954 UrahQ9CRB3 118 aa13.56□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Ank3G5E8K5 1961 aa13.56□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Cfc1P97766 202 aa13.55□□□□□ -0.24
Pcf11-201ENSMUST00000119954 1700074P13RikQ9D9G7 251 aa13.55□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Arid1bE9Q4N7 2244 aa13.55□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Cfap46E9Q2C0 2641 aa13.54□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Igkv3-3A0A140T8Q0 119 aa13.54□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Gm17577J3QNF7 156 aa13.54□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Col6a4A2AX52 2309 aa13.54□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Rpl39lQ9CQD0 51 aa13.54□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Reg3bP35230 175 aa13.53□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Igkv3-4A0A140T8Q4 119 aa13.53□□□□□ -0.24
Pcf11-201ENSMUST00000119954 NrgnP60761 78 aa13.53□□□□□ -0.24
Pcf11-201ENSMUST00000119954 H2al1aQ5M8Q2 105 aa13.53□□□□□ -0.24
Pcf11-201ENSMUST00000119954 H2al1eQ810S6 105 aa13.53□□□□□ -0.24
Pcf11-201ENSMUST00000119954 PpdpfQ9CR37 115 aa13.53□□□□□ -0.24
Pcf11-201ENSMUST00000119954 Q9DAQ5 155 aa13.53□□□□□ -0.24
Pcf11-201ENSMUST00000119954 B230359F08RikA0A0B4J1K3 109 aa13.52□□□□□ -0.24
Pcf11-201ENSMUST00000119954 H2al1bA0A087WP11 105 aa13.52□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Psmb11Q8BG41 302 aa13.52□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Defb18Q30KP5 85 aa13.52□□□□□ -0.25
Pcf11-201ENSMUST00000119954 RlfA2A7F4 1918 aa13.51□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Gm10735Q3US96 136 aa13.51□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Higd2aQ9CQJ1 106 aa13.51□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Fxyd5P97808 178 aa13.51□□□□□ -0.25
Pcf11-201ENSMUST00000119954 TncQ80YX1 2110 aa13.51□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Ptprz1B9EKR1 2312 aa13.51□□□□□ -0.25
Pcf11-201ENSMUST00000119954 BC107364E9Q5A2 140 aa13.51□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Col6a6Q8C6K9 2265 aa13.5□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Ighv3-1A0A075B5S6 116 aa13.5□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Trav13-4-dv7A0A075B6C2 110 aa13.5□□□□□ -0.25
Pcf11-201ENSMUST00000119954 PkdrejQ9Z0T6 2126 aa13.5□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Med12A2AGH6 2190 aa13.5□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Gm44965A0A0N4SVR3 59 aa13.5□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Casp8ap2Q9WUF3 1962 aa13.49□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Ighv2-6A0A075B6A7 116 aa13.49□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Psmb8P28063 276 aa13.49□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Ighv1-11A0A0A6YWI9 117 aa13.49□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Tfpi2O35536 230 aa13.49□□□□□ -0.25
Pcf11-201ENSMUST00000119954 FancmQ8BGE5 2021 aa13.49□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Igkv4-92A0A0B4J1I2 117 aa13.49□□□□□ -0.25
Pcf11-201ENSMUST00000119954 IgipA0A1B0GR74 53 aa13.49□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Gm15217A2CG07 155 aa13.49□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Prr15lQ8JZM2 100 aa13.49□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Ighv1-62-1A0A075B5U3 116 aa13.48□□□□□ -0.25
Pcf11-201ENSMUST00000119954 CenpwQ3URR0 86 aa13.48□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Triap1Q9D8Z2 76 aa13.48□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Ighv1-53A0A075B5W3 117 aa13.48□□□□□ -0.25
Pcf11-201ENSMUST00000119954 P01748 117 aa13.48□□□□□ -0.25
Pcf11-201ENSMUST00000119954 PscaP57096 123 aa13.48□□□□□ -0.25
Pcf11-201ENSMUST00000119954 P01643 108 aa13.48□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Gm10542F6XDR3 90 aa13.48□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Gm17324Q8C6J8 137 aa13.48□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Fancd2osQ9D4K4 178 aa13.48□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Frem1Q684R7 2191 aa13.47□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Gm10401E9Q3K6 71 aa13.47□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Dock4P59764 1978 aa13.47□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Gm6034E9Q101 117 aa13.46□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Gm17521F6QAC8 156 aa13.46□□□□□ -0.25
Pcf11-201ENSMUST00000119954 Snai3Q9QY31 287 aa13.46□□□□□ -0.25
Pcf11-201ENSMUST00000119954 CrygcQ61597 174 aa13.46□□□□□ -0.26
Pcf11-201ENSMUST00000119954 EnhoQ8K1D8 76 aa13.45□□□□□ -0.26
Pcf11-201ENSMUST00000119954 Wfdc15bQ9JHY4 80 aa13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms