RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Foxi1Q922I5 372 aa9.63□□□□□ -0.87
Nup88-203ENSMUST00000108531 Gemin7Q9CWY4 129 aa9.63□□□□□ -0.87
Nup88-203ENSMUST00000108531 Cmya5Q70KF4 3739 aa9.63□□□□□ -0.87
Nup88-203ENSMUST00000108531 C1qcQ02105 246 aa9.63□□□□□ -0.87
Nup88-203ENSMUST00000108531 Q5BN45 167 aa9.63□□□□□ -0.87
Nup88-203ENSMUST00000108531 Cysltr1Q99JA4 352 aa9.63□□□□□ -0.87
Nup88-203ENSMUST00000108531 Sptan1P16546 2472 aaKnown RBP9.63□□□□□ -0.87
Nup88-203ENSMUST00000108531 Srsf9Q9D0B0 222 aaKnown RBP9.62□□□□□ -0.87
Nup88-203ENSMUST00000108531 Tspan13Q9D8C2 204 aa9.62□□□□□ -0.87
Nup88-203ENSMUST00000108531 Ighv14-1A0A075B5R4 117 aa9.62□□□□□ -0.87
Nup88-203ENSMUST00000108531 Ighv8-5A0A0A6YY60 119 aa9.62□□□□□ -0.87
Nup88-203ENSMUST00000108531 Nat8b-psE0CYC6 232 aa9.62□□□□□ -0.87
Nup88-203ENSMUST00000108531 Gm2564F6Z9S8 108 aa9.62□□□□□ -0.87
Nup88-203ENSMUST00000108531 Gm37988J3QM41 62 aa9.62□□□□□ -0.87
Nup88-203ENSMUST00000108531 PlaurP35456 327 aa9.62□□□□□ -0.87
Nup88-203ENSMUST00000108531 Defa-rs7P50715 91 aa9.62□□□□□ -0.87
Nup88-203ENSMUST00000108531 Fam208bQ5DTT3 2382 aa9.62□□□□□ -0.87
Nup88-203ENSMUST00000108531 Ighv1-63A0A075B5X2 117 aa9.61□□□□□ -0.87
Nup88-203ENSMUST00000108531 F11rO88792 300 aa9.61□□□□□ -0.87
Nup88-203ENSMUST00000108531 Prr3Q811B5 190 aaKnown RBP9.61□□□□□ -0.87
Nup88-203ENSMUST00000108531 HilpdaQ9JLS0 64 aa9.61□□□□□ -0.87
Nup88-203ENSMUST00000108531 Gm6812B1AXU1 112 aa9.61□□□□□ -0.87
Nup88-203ENSMUST00000108531 MsmbO08540 113 aa9.61□□□□□ -0.87
Nup88-203ENSMUST00000108531 Pglyrp1O88593 182 aa9.61□□□□□ -0.87
Nup88-203ENSMUST00000108531 4930596D02RikQ3V0H9 216 aa9.61□□□□□ -0.87
Nup88-203ENSMUST00000108531 Trav3-1Q5R1I8 114 aa9.61□□□□□ -0.87
Nup88-203ENSMUST00000108531 Gm9961Q8BNV2 113 aa9.61□□□□□ -0.87
Nup88-203ENSMUST00000108531 Tac4Q99N14 128 aa9.61□□□□□ -0.87
Nup88-203ENSMUST00000108531 Triap1Q9D8Z2 76 aa9.61□□□□□ -0.87
Nup88-203ENSMUST00000108531 Timm17aQ9Z0V8 171 aa9.61□□□□□ -0.87
Nup88-203ENSMUST00000108531 Gm21370Q3T9V6 190 aa9.6□□□□□ -0.87
Nup88-203ENSMUST00000108531 Uqcrfs1Q9CR68 274 aa9.6□□□□□ -0.87
Nup88-203ENSMUST00000108531 Mllt11P97783 90 aa9.6□□□□□ -0.87
Nup88-203ENSMUST00000108531 Dmrt3Q80WT2 476 aa9.6□□□□□ -0.87
Nup88-203ENSMUST00000108531 Tcrg-C1A0A075B5Z0 172 aa9.59□□□□□ -0.87
Nup88-203ENSMUST00000108531 Ube2d3P61079 147 aa9.59□□□□□ -0.87
Nup88-203ENSMUST00000108531 Ube2d2P62838 147 aa9.59□□□□□ -0.87
Nup88-203ENSMUST00000108531 NrepQ07475 68 aa9.59□□□□□ -0.87
Nup88-203ENSMUST00000108531 Gm17455G3UW87 128 aa9.59□□□□□ -0.87
Nup88-203ENSMUST00000108531 Wfdc15aQ8BH89 80 aa9.59□□□□□ -0.87
Nup88-203ENSMUST00000108531 Lrrk2Q5S006 2527 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Insl3O09107 122 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Trav2Q5R1I9 109 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Atp6v0e2Q91XE7 81 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Ighv1-85A0A075B5Y6 117 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Ighv1-5A0A0A6YWG2 117 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Ighv1-52A0A0A6YXC3 117 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Gm10553J3QPF1 123 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Hoxd3P09027 433 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 FcorP0DJI6 106 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Snrpd3P62320 126 aaKnown RBP9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Klk5Q9D140 293 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Higd1aQ9JLR9 95 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Clec5aQ9R007 190 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Sptbn4E9PX29 2561 aa9.58□□□□□ -0.88
Nup88-203ENSMUST00000108531 Trbv17A0A140T8P8 114 aa9.57□□□□□ -0.88
Nup88-203ENSMUST00000108531 Gm9925F6T2U3 160 aa9.57□□□□□ -0.88
Nup88-203ENSMUST00000108531 Pkd1l2Q7TN88 2461 aa9.57□□□□□ -0.88
Nup88-203ENSMUST00000108531 Ighv2-3A0A075B696 115 aa9.57□□□□□ -0.88
Nup88-203ENSMUST00000108531 Gm11565A2A4M7 156 aa9.57□□□□□ -0.88
Nup88-203ENSMUST00000108531 P01802 115 aa9.56□□□□□ -0.88
Nup88-203ENSMUST00000108531 Ankrd39Q9D2X0 183 aa9.56□□□□□ -0.88
Nup88-203ENSMUST00000108531 Lelp1Q9DAE3 120 aa9.56□□□□□ -0.88
Nup88-203ENSMUST00000108531 Fam216aQ9DB54 251 aa9.56□□□□□ -0.88
Nup88-203ENSMUST00000108531 Ighv1-58A0A075B5W9 117 aa9.56□□□□□ -0.88
Nup88-203ENSMUST00000108531 Gm28044L7N1X0 119 aa9.56□□□□□ -0.88
Nup88-203ENSMUST00000108531 Cited2O35740 269 aa9.56□□□□□ -0.88
Nup88-203ENSMUST00000108531 P04219 140 aa9.56□□□□□ -0.88
Nup88-203ENSMUST00000108531 Klhdc1Q80YG3 406 aa9.56□□□□□ -0.88
Nup88-203ENSMUST00000108531 NbeaQ9EPN1 2936 aa9.55□□□□□ -0.88
Nup88-203ENSMUST00000108531 Gm28269A0A087WSG3 125 aa9.55□□□□□ -0.88
Nup88-203ENSMUST00000108531 LeprotO89013 131 aa9.55□□□□□ -0.88
Nup88-203ENSMUST00000108531 BC048562Q80ZQ7 204 aa9.55□□□□□ -0.88
Nup88-203ENSMUST00000108531 AI854703Q8BIN3 203 aa9.55□□□□□ -0.88
Nup88-203ENSMUST00000108531 Taf15Q8BQ46 557 aaKnown RBP9.54□□□□□ -0.88
Nup88-203ENSMUST00000108531 Il1f10Q8R459 152 aa9.54□□□□□ -0.88
Nup88-203ENSMUST00000108531 Ighv2-7A0A075B5Q8 116 aa9.54□□□□□ -0.88
Nup88-203ENSMUST00000108531 Krtap27-1E9PX37 202 aa9.54□□□□□ -0.88
Nup88-203ENSMUST00000108531 P06329 120 aa9.54□□□□□ -0.88
Nup88-203ENSMUST00000108531 TtrP07309 147 aa9.54□□□□□ -0.88
Nup88-203ENSMUST00000108531 CckP09240 115 aa9.54□□□□□ -0.88
Nup88-203ENSMUST00000108531 Mpv17l2Q8VIK2 200 aa9.53□□□□□ -0.88
Nup88-203ENSMUST00000108531 Mrpl35Q9CQL6 188 aa9.53□□□□□ -0.88
Nup88-203ENSMUST00000108531 4930564D02RikQ9D4S4 103 aa9.53□□□□□ -0.88
Nup88-203ENSMUST00000108531 Ankhd1E9PUR0 2548 aaKnown RBP9.53□□□□□ -0.88
Nup88-203ENSMUST00000108531 P01753 117 aa9.53□□□□□ -0.88
Nup88-203ENSMUST00000108531 SonQ9QX47 2444 aaKnown RBP9.52□□□□□ -0.88
Nup88-203ENSMUST00000108531 Col6a4A2AX52 2309 aa9.52□□□□□ -0.89
Nup88-203ENSMUST00000108531 Trav9-2A0A075B647 113 aa9.52□□□□□ -0.89
Nup88-203ENSMUST00000108531 Trav9-4A0A0B4J1K2 113 aa9.52□□□□□ -0.89
Nup88-203ENSMUST00000108531 C920008G01RikA0A0B4J1N1 112 aa9.52□□□□□ -0.89
Nup88-203ENSMUST00000108531 Spag11Q8K4N2 71 aa9.52□□□□□ -0.89
Nup88-203ENSMUST00000108531 Dynlrb2Q9DAJ5 96 aa9.52□□□□□ -0.89
Nup88-203ENSMUST00000108531 Tnfrsf23Q9ER63 176 aa9.52□□□□□ -0.89
Nup88-203ENSMUST00000108531 Svep1A2AVA0 3567 aa9.52□□□□□ -0.89
Nup88-203ENSMUST00000108531 Gm933J3QPC1 141 aa9.51□□□□□ -0.89
Nup88-203ENSMUST00000108531 GalmQ8K157 342 aa9.51□□□□□ -0.89
Nup88-203ENSMUST00000108531 Spata45Q9CVW4 97 aa9.51□□□□□ -0.89
Nup88-203ENSMUST00000108531 Ifitm1Q9D103 106 aa9.51□□□□□ -0.89
Nup88-203ENSMUST00000108531 Morn5Q9DAI9 170 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms