RNA–Protein interactions for RNA: ENSMUST00000061209.6

Ccdc71-201, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-201ENSMUST00000061209 Cphx2Q8BX39 182 aa9.4□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Q99M08 65 aa9.4□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Ighv1-66A0A075B5X5 117 aa9.39□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 E130114P18RikF6S0S7 154 aa9.39□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Leap2Q91V13 76 aa9.39□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Gm15294V9GXA7 121 aa9.39□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Trav16d-dv11A0A075B617 117 aa9.39□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 A0A1Y7VMQ4 148 aa9.39□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Pglyrp1O88593 182 aa9.39□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Olfr975Q8VG91 310 aa9.39□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Olfr869E9PX82 323 aa9.38□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 P84751 237 aa9.38□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Sdhaf1Q3U276 118 aa9.38□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 P06334 169 aa9.38□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Trav7d-3Q5R1I1 112 aa9.38□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 GfyJ3KML8 504 aa9.37□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Ndufv3Q8BK30 104 aaKnown RBP9.37□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 TbpP29037 316 aa9.37□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Sumo2P61957 95 aaKnown RBP9.37□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Znf740Q6NZQ6 180 aa9.37□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Q8R092 253 aa9.37□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Tcl1b4P56844 120 aa9.36□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Ss18Q62280 418 aa9.36□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 P01736 120 aa9.36□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Gm14137Q8CE97 175 aa9.36□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Gm28044L7N1X0 119 aa9.35□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Psmb2Q9R1P3 201 aa9.35□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Ndufa4Q62425 82 aaKnown RBP9.35□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Ramp1Q9WTJ5 148 aa9.35□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Pla2g1bQ9Z0Y2 146 aa9.35□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Umad1E0CX23 159 aa9.35□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Gm10322F7D7I4 111 aa9.35□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Igll1P20764 209 aa9.35□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Tmem136Q3TYE7 245 aa9.35□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Dnah10D3YYQ8 4591 aa9.34□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Ighv8-12A0A0G2JDE1 119 aa9.34□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Dkk2Q9QYZ8 259 aa9.34□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Trav14-2A0A075B694 121 aa9.34□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 A730046J19RikA0A1B0GSN8 89 aa9.34□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Foxi3E0CZH3 425 aa9.34□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Gm10509O88255 85 aa9.34□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Rbmxl2Q9DAE2 385 aaKnown RBP9.34□□□□□ -0.91
Ccdc71-201ENSMUST00000061209 Nat8f4G5E8L3 226 aa9.33□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 NpyP57774 97 aa9.33□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 A530064D06RikQ8BNV8 229 aa9.33□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Cysltr1Q99JA4 352 aa9.33□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Atg101Q9D8Z6 218 aa9.33□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Krtap27-1E9PX37 202 aa9.33□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Q3UNZ8 350 aa9.33□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Ammecr1lQ8JZZ6 310 aa9.33□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Fam241bQ9D882 120 aa9.33□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 H2al1nQ497L1 109 aa9.33□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Morn3Q8C5T4 241 aa9.33□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Fabp4P04117 132 aa9.32□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Fxyd5P97808 178 aa9.32□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 D730001G18RikA0A087WQU7 115 aa9.32□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Gm9513B3GLJ6 99 aa9.32□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Gm17430F6RSK3 157 aa9.32□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 AamdcQ8R0P4 122 aa9.32□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 FcgbpE9Q0B5 2583 aa9.31□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 OdaphJ3QNT8 126 aa9.31□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Gm1968Q3T9I3 115 aa9.31□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Snai3Q9QY31 287 aa9.31□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Fndc10A2A9Q0 223 aa9.3□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 CtrlQ9ER05 264 aa9.3□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Trav9d-3A0A075B695 113 aa9.3□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Lamtor2Q9JHS3 125 aa9.3□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Igkv4-91A0A075B5L2 119 aa9.29□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Esp3J3QN49 87 aa9.29□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Rab24P35290 203 aa9.29□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Gata3P23772 443 aa9.29□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 IqcjQ8BPW0 110 aa9.29□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Snx22Q8C084 192 aa9.29□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Trav7-2Q5R1I3 112 aa9.28□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Rnf114Q9ET26 229 aa9.28□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Ighv1-5A0A0A6YWG2 117 aa9.28□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Gm17359A0A0G2JEB7 487 aa9.28□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Rpl39P62892 51 aa9.28□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Cmc4Q61908 68 aa9.28□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Polr2kQ63871 58 aa9.28□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Slc25a2Q99ML6 265 aa9.28□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Card19Q9D1I2 183 aa9.28□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Trav6-6A0A075B603 114 aa9.28□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Gm28305F6U473 122 aa9.28□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Spry2Q9QXV8 315 aa9.28□□□□□ -0.92
Ccdc71-201ENSMUST00000061209 Trav12-3A0A075B648 115 aa9.27□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 Lyzl4Q9D925 145 aa9.27□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 CcsQ9WU84 274 aa9.27□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 Atp5lQ9CPQ8 103 aa9.27□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 Ndufa3Q9CQ91 84 aa9.27□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 Higd2aQ9CQJ1 106 aa9.27□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 OtorQ9JIE3 128 aa9.27□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 Pkd1l1Q8R526 2615 aa9.26□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 Gm10130F6ZHM5 101 aa9.26□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 Gm5629P06327 117 aa9.26□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 Pam16Q9CQV1 125 aa9.26□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 Fam213bQ9DB60 201 aa9.26□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 Ighv8-8A0A0A6YXQ0 119 aa9.26□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 TirapQ99JY1 241 aa9.26□□□□□ -0.93
Ccdc71-201ENSMUST00000061209 TcraP01849 138 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 72 ms