RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Higd2aQ9CQJ1 106 aa13.59□□□□□ -0.23
Pcdhac2-201ENSMUST00000047479 Fam241bQ9D882 120 aa13.59□□□□□ -0.23
Pcdhac2-201ENSMUST00000047479 Gvin1Q80SU7 2427 aa13.58□□□□□ -0.23
Pcdhac2-201ENSMUST00000047479 CadB2RQC6 2225 aa13.58□□□□□ -0.23
Pcdhac2-201ENSMUST00000047479 Igkv8-18A0A0B4J1J3 123 aa13.58□□□□□ -0.23
Pcdhac2-201ENSMUST00000047479 1810032O08RikE9PZV8 113 aa13.58□□□□□ -0.23
Pcdhac2-201ENSMUST00000047479 Ighv1-53A0A075B5W3 117 aa13.58□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 P01748 117 aa13.58□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 FancmQ8BGE5 2021 aa13.58□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Lst1O08843 95 aa13.58□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Col8a2P25318 699 aa13.58□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Reg3bP35230 175 aa13.58□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Prop1P97458 223 aa13.58□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Gm10251J3QPM5 127 aa13.57□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 P04943 107 aa13.57□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Rspo3Q2TJ95 277 aa13.57□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Gm2916Q9D9B9 127 aa13.57□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Ucn2Q99ML8 113 aa13.57□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Cox7b2Q9D2H1 82 aa13.57□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Gm10518F6UQQ9 182 aa13.57□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Camk2n2Q78WH7 79 aa13.56□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Heatr5aQ5PRF0 2038 aa13.56□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Ly6g5bQ8K1T4 194 aa13.56□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Igkv3-5A0A140T8M6 119 aa13.56□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 B9d2Q3UK10 175 aa13.56□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Trav13d-4A0A0G2JFX3 110 aa13.56□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Ccl25O35903 144 aa13.55□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 MifP34884 115 aaKnown RBP13.55□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Nlrc5C3VPR6 1915 aa13.55□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Trav6n-6A0A075B6B2 114 aa13.55□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 A230072I06RikQ3UUJ8 172 aa13.55□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Gm10735Q3US96 136 aa13.54□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Znrf2Q71FD5 238 aa13.54□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Ebi3O35228 228 aa13.53□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 GhrhP16043 103 aa13.53□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Igkv1-88A0A140T8N1 120 aa13.53□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Timm17aQ9Z0V8 171 aa13.53□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Anapc1P53995 1944 aaKnown RBP13.53□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Igkv3-10A0A0G2JGN0 119 aa13.52□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Ube2aQ9Z255 152 aa13.52□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Pcp4P63054 62 aa13.52□□□□□ -0.24
Pcdhac2-201ENSMUST00000047479 Wnk1P83741 2377 aa13.52□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Foxi2Q3I5G5 311 aa13.52□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Rpl39P62892 51 aa13.51□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Defb47Q30KN1 79 aa13.51□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Glrp1E9Q9S8 174 aa13.51□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Egr2P08152 470 aa13.51□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 BB014433Q8C5R5 389 aa13.51□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Ociad2Q9D8W7 154 aa13.51□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Gm17677B3GLJ5 116 aa13.51□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Gm10638F6QEG2 257 aa13.51□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Zfand3Q497H0 227 aa13.51□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Fam19a4Q7TPG5 135 aa13.51□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Greb1Q3UHK3 1954 aa13.5□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Gm17472A0A075B683 117 aa13.5□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Trav13-2A0A075B649 110 aa13.5□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Rpl18aP62717 176 aaKnown RBP13.5□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Mrpl55Q9CZ83 127 aa13.5□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 P04944 107 aa13.49□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Trav13n-1A0A0G2JEU8 110 aa13.49□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Vsig4F6TUL9 280 aa13.49□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 4930470P17RikQ9D542 155 aa13.49□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 PkdrejQ9Z0T6 2126 aa13.49□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Trbv16A0A0B4J1H3 115 aa13.49□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 U90926O08546 118 aa13.49□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Trav12d-3A0A075B6A4 115 aa13.48□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Gm14137Q8CE97 175 aa13.48□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Tmem223Q9CQE2 199 aaKnown RBP13.48□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 F5O88783 2183 aa13.48□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Crip1P63254 77 aa13.48□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Iglv1A0A075B663 117 aa13.48□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Sigmar1O55242 223 aa13.48□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 MgamB5THE2 1827 aa13.48□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Gata1P17679 413 aa13.47□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 P84751 237 aa13.47□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Gm9936Q8C864 160 aa13.47□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 TncQ80YX1 2110 aa13.47□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Clec4b2Q67DU8 208 aa13.47□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 IgipA0A1B0GR74 53 aa13.47□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Klk5Q9D140 293 aa13.46□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 BikO70337 150 aa13.46□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 P01729 129 aa13.46□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Plscr4P58196 326 aa13.46□□□□□ -0.25
Pcdhac2-201ENSMUST00000047479 Trav13d-1A0A075B606 110 aa13.46□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Gm3618D3Z4P5 127 aa13.46□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Wfdc2Q9DAU7 174 aa13.45□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 C920008G01RikA0A0B4J1N1 112 aa13.45□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Gm17577J3QNF7 156 aa13.45□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Trav13-4-dv7A0A075B6C2 110 aa13.44□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Lce6aD3YV94 81 aa13.44□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Rbmy1bQ60990 380 aa13.44□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Odf3l1Q810P2 275 aa13.44□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Spry2Q9QXV8 315 aa13.44□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Trav4d-3A0A075B625 110 aa13.44□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 P01820 115 aa13.43□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Gm9958Q8C9U4 106 aa13.43□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Arhgap21Q6DFV3 1944 aa13.43□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Mrpl35Q9CQL6 188 aa13.43□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Lmo4P61969 165 aa13.42□□□□□ -0.26
Pcdhac2-201ENSMUST00000047479 Col5a3Q9JLI2 1739 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms