RNA–Protein interactions for RNA: ENSMUST00000193389.1

Pcdha6-201, Transcript of Pcdha6 protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha6, Length 4,653 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha6-201ENSMUST00000193389 Ighv1-36A0A0A6YXT2 117 aa8.38□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 CtrlQ9ER05 264 aa8.38□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Tnrc6aQ3UHK8 1896 aaKnown RBP8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Ighv1-20A0A0A6YX66 117 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Svs5P30933 122 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Ube2bP63147 152 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Pate4Q09098 99 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Q4KKZ1 196 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Olfr312Q7TRZ9 308 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Igkv13-85A0A075B666 115 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Gm37389A0A0A6YW05 95 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Igkv6-15A0A140T8M5 115 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Gm17660B9UIU9 90 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Foxf2O54743 446 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 P0C913 63 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Stpg1Q9D2F5 341 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Hectd1Q69ZR2 2618 aaKnown RBP8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Lrrk1Q3UHC2 2014 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Ndufb1P0DN34 57 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Tmem167aQ9CR64 72 aa8.37□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Ighv5-12-4A0A0A6YWG4 117 aa8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 P01729 129 aa8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 PpdpfQ9CR37 115 aa8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Them7Q9DCP4 223 aa8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Ccpg1osV9GXK1 122 aa8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Prrc2aQ7TSC1 2158 aaKnown RBP8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Tet1Q3URK3 2007 aaKnown RBP8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Igkv4-63A0A0G2JFU6 117 aa8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Cox7a1P56392 80 aa8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Tm2d3Q8BJ83 261 aa8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Gm10192Q3V0S1 108 aa8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Igkv14-111A0A140T8P9 117 aa8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Gm4792Q569Q2 183 aa8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Gm15294V9GXA7 121 aa8.36□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 DysfQ9ESD7 2090 aa8.35□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Igkv14-130A0A0G2JF45 117 aa8.35□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Ighv1-61P01749 117 aa8.35□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Loxl1P97873 607 aa8.35□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Atp23Q9CWQ3 201 aa8.35□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 AtrQ9JKK8 2635 aa8.35□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Ly6lH3BJG9 140 aa8.35□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Gm5129F6YHA9 99 aa8.35□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Ighv1-52A0A0A6YXC3 117 aa8.35□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Igkv4-68A0A0B4J1I7 117 aa8.35□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Cox6b1P56391 86 aaKnown RBP8.35□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 A0A1Y7VLU2 103 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 3110021N24RikJ3QMN2 152 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Spink4O35679 86 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Ighv3-6P18531 116 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Gata3P23772 443 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Gm10384Q3UQ87 92 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Zc2hc1aQ8BJH1 324 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Tmem190Q9D2E9 166 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Nup210Q9QY81 1886 aaKnown RBP8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Trav7-6A0A075B640 112 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Igkv13-84A0A140T8N3 115 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 P01794 123 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 P0C1Z5 52 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Smrp1Q2MH31 260 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Foxi2Q3I5G5 311 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Morn5Q9DAI9 170 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 Wt1P22561 449 aa8.34□□□□□ -1.07
Pcdha6-201ENSMUST00000193389 DscamQ9ERC8 2013 aa8.34□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Ighv1-81A0A075B5Y4 117 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Igkv4-59A0A0B4J1I8 117 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Rpl18aP62717 176 aaKnown RBP8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Defb47Q30KN1 79 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 FasnP19096 2504 aaKnown RBP8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Ighv1-31A0A0A6YWK5 117 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Ighv1-49A0A0A6YWX2 117 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Spink1P09036 80 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Cmc4Q61908 68 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Gm26558Q8BLW8 286 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Zfp648D3Z0W3 525 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Defb18Q30KP5 85 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Spata46Q4FZF2 204 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Dmrtc1c1Q9D410 238 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Cd164Q9R0L9 197 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Trav7-1A0A0G2JEV5 112 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Cpsf4lE9Q2N0 280 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Ube2aQ9Z255 152 aa8.33□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Igh-VJ558P01758 117 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Ormdl1Q921I0 153 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Wdr38Q9D994 303 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Col24a1Q30D77 1733 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Ighv5-9-1A0A0A6YVS4 126 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Igkv19-93A0A0G2JFZ3 115 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Ly6c1P0CW02 131 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Fam110dQ80X91 271 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Gm11733Q8BQP1 125 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 4930415O20RikQ8CDT5 131 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Col12a1Q60847 3120 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Ighv1-26A0A075B5V0 117 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Pip4p1Q3TWL2 284 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Gm9961Q8BNV2 113 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Wdr90Q6ZPG2 1874 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Igkv4-54A0A0G2JES9 117 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 P01787 123 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 P03980 138 aa8.32□□□□□ -1.08
Pcdha6-201ENSMUST00000193389 Q80X32 188 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms