RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ighv5-6A0A075B5Q0 117 aa7.35□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Gm29666A0A087WQ99 126 aa7.35□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Gm35549A0A0N4SUS7 141 aa7.35□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 CrygaP04345 174 aa7.35□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ighv1-7A0A075B5T7 117 aa7.35□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Gm17660B9UIU9 90 aa7.35□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 EppinQ9DA01 134 aa7.35□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Obox8V9GWY9 217 aa7.35□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Med13Q5SWW4 2171 aa7.35□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Cacna1iE9Q7P2 2199 aa7.34□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Zcchc24B2RVL6 241 aaKnown RBP7.34□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Xcl1P47993 114 aa7.34□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 H1fxQ80ZM5 188 aa7.34□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Znhit1Q8R331 154 aa7.34□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Brk1Q91VR8 75 aa7.34□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Zc2hc1bQ9D534 172 aa7.34□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Iah1Q9DB29 249 aa7.34□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 SvilQ8K4L3 2170 aa7.34□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 1500011B03RikQ3TTH7 73 aa7.34□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Defb28Q3V2L0 89 aa7.34□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ndufb3Q9CQZ6 104 aa7.34□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 RhohQ9D3G9 191 aa7.34□□□□□ -1.23
Hmgb1-201ENSMUST00000085546 Ccdc179J3QM76 67 aa7.33□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Zfp36P22893 319 aaKnown RBP7.33□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 FryE9Q8I9 3020 aa7.33□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Defa7P50705 93 aa7.33□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Gm21748Q3UE70 102 aa7.33□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Spink2Q8BMY7 86 aa7.33□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Sdk2Q6V4S5 2176 aa7.33□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Ighv1-5A0A0A6YWG2 117 aa7.33□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Trav11A0A0B4J1J9 114 aa7.33□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Gm2564F6Z9S8 108 aa7.33□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 LeprotO89013 131 aa7.33□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Tm2d2Q8R0I4 213 aa7.33□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Igkv4-71A0A0G2JEH0 117 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 BokO35425 213 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Fhl1P97447 280 aaKnown RBP7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Ang5Q5GAN1 145 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 A530064D06RikQ8BNV8 229 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Gm9949Q8C9F4 104 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 SpinklQ8CEK3 90 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Mrpl35Q9CQL6 188 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 4930519P11RikQ9CUJ8 166 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Timm17aQ9Z0V8 171 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Tcf20Q9EPQ8 1987 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Igkv19-93A0A0G2JFZ3 115 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Gm10271F6WY25 52 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Socs3O35718 225 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Hoxd3P09027 433 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Gm5105Q8C6Y9 112 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Serp1Q9Z1W5 66 aa7.32□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Trav6-2Q5R1I4 113 aa7.31□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Nup37Q9CWU9 326 aa7.31□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Prrc2aQ7TSC1 2158 aaKnown RBP7.31□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 AdipoqQ60994 247 aa7.31□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Psmb11Q8BG41 302 aa7.31□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Gm10300Q8C8P7 189 aa7.31□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Ndufb4Q9CQC7 129 aa7.31□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Kntc1Q8C3Y4 2207 aa7.3□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Ighv1-77A0A0G2JGS9 117 aa7.3□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Gsx1P31315 261 aa7.3□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Tmem263Q9DAM7 115 aa7.3□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Pla2g2fQ9QZT4 168 aa7.3□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Arfgef3Q3UGY8 2170 aa7.3□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Ighv1-81A0A075B5Y4 117 aa7.3□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Gm11213A0A1B0GR83 88 aa7.3□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Krtap16-1A2A5X5 502 aa7.3□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 TshbP12656 138 aa7.3□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Cfap126Q6P8X9 189 aa7.3□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Dph3Q8K0W9 82 aa7.3□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Ranbp2Q9ERU9 3053 aaKnown RBP7.29□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Prpmp5E9PXN1 296 aa7.29□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Mpv17l2Q8VIK2 200 aa7.29□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Mrpl33Q9CQP0 65 aa7.29□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Timm17bQ9Z0V7 172 aa7.29□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Amn1B8JKV0 258 aa7.29□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Tcte2E9PY37 120 aa7.29□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Gm17455G3UW87 128 aa7.29□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Lamtor3O88653 124 aa7.29□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Gm5941Q497P9 117 aa7.29□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Fancd2osQ9D4K4 178 aa7.29□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Jmjd1cQ69ZK6 2350 aa7.29□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Dock10Q8BZN6 2150 aa7.29□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Ighv1-31A0A0A6YWK5 117 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Fxyd3Q61835 88 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Tmem223Q9CQE2 199 aaKnown RBP7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 PcntP48725 2898 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Ighv1-55A0A075B5W6 117 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 P01748 117 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 AW146154Q3TPQ7 468 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Gm6040Q4QY32 63 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 9430069I07RikQ9CX21 111 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Plce1Q8K4S1 2282 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Glrp1E9Q9S8 174 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Sh2d1aO88890 126 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Rpl39P62892 51 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Rnf7Q9WTZ1 113 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Wisp2Q9Z0G4 251 aa7.28□□□□□ -1.24
Hmgb1-201ENSMUST00000085546 Gm20403G3UYB0 123 aa7.27□□□□□ -1.25
Hmgb1-201ENSMUST00000085546 Cystm1Q8K353 104 aa7.27□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms