RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Defa-rs2P17534 91 aa14.2□□□□□ -0.14
Scaf11-201ENSMUST00000047835 HelzQ6DFV5 1964 aaKnown RBP14.19□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Ighv8-8A0A0A6YXQ0 119 aa14.19□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Igkv4-59A0A0B4J1I8 117 aa14.19□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Trav9d-4A0A0G2JG37 103 aa14.19□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Isg15Q64339 161 aaKnown RBP14.19□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Trbv13-1A0A0B4J1P8 112 aa14.19□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Defa2P28309 93 aa14.19□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Crip1P63254 77 aa14.19□□□□□ -0.14
Scaf11-201ENSMUST00000047835 MrapQ9D159 127 aa14.19□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Cspg4Q8VHY0 2327 aa14.19□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Defa16P50714 93 aa14.19□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Olfr313Q5NC55 308 aa14.19□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Gm9958Q8C9U4 106 aa14.18□□□□□ -0.14
Scaf11-201ENSMUST00000047835 MsmbO08540 113 aa14.18□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Gemin7Q9CWY4 129 aa14.18□□□□□ -0.14
Scaf11-201ENSMUST00000047835 TncQ80YX1 2110 aa14.18□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Gm16381A0A1Y7VKT9 73 aa14.18□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Rnase1P00683 149 aa14.18□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Lmo4P61969 165 aa14.18□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Wnk1P83741 2377 aa14.18□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Zfand3Q497H0 227 aa14.18□□□□□ -0.14
Scaf11-201ENSMUST00000047835 1110002E22RikE0CYV9 1786 aa14.18□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Samd13D3YUG0 102 aa14.17□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Ighv6-7A0A0A6YWU3 119 aa14.17□□□□□ -0.14
Scaf11-201ENSMUST00000047835 MdfiP70331 251 aa14.17□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Ndufb4Q9CQC7 129 aa14.17□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Lect2O88803 151 aa14.17□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Trav6-6A0A075B603 114 aa14.16□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Hist1h4aP62806 103 aaKnown RBP14.16□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Vwc2lQ505H4 222 aa14.16□□□□□ -0.14
Scaf11-201ENSMUST00000047835 1810032O08RikE9PZV8 113 aa14.16□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Ndufc2Q9CQ54 120 aa14.16□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Znhit3Q9CQK1 151 aa14.16□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Pglyrp4Q0VB07 374 aa14.16□□□□□ -0.14
Scaf11-201ENSMUST00000047835 A530064D06RikQ8BNV8 229 aa14.16□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Gm20481G3UXK4 153 aa14.15□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Srsf2Q62093 221 aaKnown RBP14.15□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Igkv4-72A0A0B4J1I4 117 aa14.15□□□□□ -0.14
Scaf11-201ENSMUST00000047835 LeprotO89013 131 aa14.15□□□□□ -0.14
Scaf11-201ENSMUST00000047835 OdaphJ3QNT8 126 aa14.15□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Pxt1Q8K459 51 aa14.15□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Rmi2Q3UPE3 149 aa14.15□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Pcsk5Q04592 1877 aa14.15□□□□□ -0.14
Scaf11-201ENSMUST00000047835 Foxc1Q61572 553 aa14.15□□□□□ -0.15
Scaf11-201ENSMUST00000047835 BC048562Q80ZQ7 204 aa14.14□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Tomm6Q9CQN3 74 aa14.14□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Spg11Q3UHA3 2430 aa14.14□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Cox7a1P56392 80 aa14.14□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Col4a4Q9QZR9 1682 aa14.14□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Defa23Q5G866 93 aa14.13□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Mustn1Q99JI1 82 aa14.13□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Gm28269A0A087WSG3 125 aa14.13□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Dand5Q76LW6 185 aa14.13□□□□□ -0.15
Scaf11-201ENSMUST00000047835 MalO09198 153 aa14.13□□□□□ -0.15
Scaf11-201ENSMUST00000047835 P04944 107 aa14.13□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Cox17P56394 63 aa14.13□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Med13lQ6JPI3 2207 aa14.12□□□□□ -0.15
Scaf11-201ENSMUST00000047835 E130116L18RikQ8BMV6 101 aa14.12□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Crlf1Q9JM58 425 aa14.12□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Gm20730A0A075B5J6 119 aa14.12□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Wipf1Q8K1I7 493 aa14.12□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Igkv4-53A0A0G2JFC6 119 aa14.12□□□□□ -0.15
Scaf11-201ENSMUST00000047835 IgipA0A1B0GR74 53 aa14.12□□□□□ -0.15
Scaf11-201ENSMUST00000047835 PrcdQ00LT2 53 aa14.12□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Fer1l4A3KGK3 1992 aa14.12□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Igkv4-54A0A0G2JES9 117 aa14.11□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Ifitm1Q9D103 106 aa14.11□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Spink12Q9D256 87 aa14.11□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Alms1Q8K4E0 3251 aa14.11□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Igkv4-79A0A075B5L8 119 aa14.11□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Odf1Q61999 247 aa14.11□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Morn5Q9DAI9 170 aa14.11□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Insl3O09107 122 aa14.11□□□□□ -0.15
Scaf11-201ENSMUST00000047835 P01820 115 aa14.11□□□□□ -0.15
Scaf11-201ENSMUST00000047835 NpsP0C0P8 89 aa14.11□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Shisa9Q9CZN4 424 aa14.11□□□□□ -0.15
Scaf11-201ENSMUST00000047835 PkdrejQ9Z0T6 2126 aa14.1□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Pla2g2cP48076 150 aa14.1□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Defa7P50705 93 aa14.1□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Q99M08 65 aa14.09□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Gatd1Q8BFQ8 220 aa14.09□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Ube2v1Q9CZY3 147 aa14.09□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Ighv1-53A0A075B5W3 117 aa14.09□□□□□ -0.15
Scaf11-201ENSMUST00000047835 P01745 121 aa14.09□□□□□ -0.15
Scaf11-201ENSMUST00000047835 P01748 117 aa14.09□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Ndufa3Q9CQ91 84 aa14.09□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Igkv4-69A0A0B4J1I6 116 aa14.09□□□□□ -0.15
Scaf11-201ENSMUST00000047835 Oxld1Q9CR10 201 aa14.08□□□□□ -0.16
Scaf11-201ENSMUST00000047835 Morn3Q8C5T4 241 aa14.08□□□□□ -0.16
Scaf11-201ENSMUST00000047835 Ss18l2Q9D174 77 aa14.08□□□□□ -0.16
Scaf11-201ENSMUST00000047835 Atp6v0e2Q91XE7 81 aa14.08□□□□□ -0.16
Scaf11-201ENSMUST00000047835 Atp5g3P56384 141 aa14.07□□□□□ -0.16
Scaf11-201ENSMUST00000047835 Atp5g1Q9CR84 136 aa14.07□□□□□ -0.16
Scaf11-201ENSMUST00000047835 AcacbE9Q4Z2 2448 aa14.07□□□□□ -0.16
Scaf11-201ENSMUST00000047835 Ang3P97802 145 aa14.07□□□□□ -0.16
Scaf11-201ENSMUST00000047835 1500011B03RikQ3TTH7 73 aa14.07□□□□□ -0.16
Scaf11-201ENSMUST00000047835 BC048502Q80Y74 154 aa14.07□□□□□ -0.16
Scaf11-201ENSMUST00000047835 Trav14d-3-dv8A0A075B619 120 aa14.07□□□□□ -0.16
Scaf11-201ENSMUST00000047835 Gata3P23772 443 aa14.07□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 145.2 ms