RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Gm17455G3UW87 128 aa11.3□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Gm21693J3QK27 380 aa11.3□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Rbmy1a1O35698 380 aa11.3□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 P18527 97 aa11.3□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Gm7489Q3UT34 171 aa11.3□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Prr3Q811B5 190 aaKnown RBP11.3□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 8030423J24RikQ9CX45 142 aa11.3□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Defa34D3Z0J0 93 aa11.29□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 P06328 117 aa11.29□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Mcrip2Q9CQB2 160 aaKnown RBP11.29□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Chd8Q09XV5 2582 aaKnown RBP11.29□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Gm10271F6WY25 52 aa11.28□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 LystP97412 3788 aa11.28□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 LrbaQ9ESE1 2856 aa11.28□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Gm10553J3QPF1 123 aa11.28□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Hbb-bsA8DUK4 147 aa11.28□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Gm17430F6RSK3 157 aa11.28□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Hbb-b1P02088 147 aa11.28□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Trav2Q5R1I9 109 aa11.28□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Htr1dQ61224 374 aa11.28□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Mtatp8P03930 67 aa11.27□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 Spcs1Q9D958 161 aa11.27□□□□□ -0.6
Nkx3-1-201ENSMUST00000022646 OtogO55225 2910 aa11.27□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Ighv12-3A0A075B5T1 117 aa11.27□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Trbv13-1A0A0B4J1P8 112 aa11.27□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Klk7Q91VE3 249 aa11.27□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Ighv1-12A0A0A6YXJ9 117 aa11.26□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Bak1O08734 209 aa11.26□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Gm5629P06327 117 aa11.26□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Odf3Q920N1 254 aa11.26□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Brd3osA0A1B0GRB6 84 aa11.26□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Bri3P28662 125 aa11.26□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 PerpQ9JK95 193 aa11.26□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Sorl1O88307 2215 aaKnown RBP11.26□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Nbeal1E9PYP2 2688 aa11.26□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Ndufb4Q9CQC7 129 aa11.26□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Q9D727 114 aa11.26□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Defa-rs7P50715 91 aa11.25□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Pxt1Q8K459 51 aa11.25□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Krtap26-1Q9D7N2 215 aa11.25□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Trbv17A0A140T8P8 114 aa11.25□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Cks1brtQ3UNC9 96 aa11.25□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Uqcrfs1Q9CR68 274 aa11.25□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Wfdc15aQ8BH89 80 aa11.24□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Ighv14-1A0A075B5R4 117 aa11.24□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Gm26602M0QWA4 95 aa11.24□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Lgals6O54891 301 aa11.24□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Tmem170bP86050 132 aa11.24□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Olfr313Q5NC55 308 aa11.24□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Foxi1Q922I5 372 aa11.24□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Mustn1Q99JI1 82 aa11.24□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Q9CX63 252 aa11.24□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 FlncQ8VHX6 2726 aaKnown RBP11.24□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Trav8-1A0A075B641 109 aa11.24□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Iah1Q9DB29 249 aa11.24□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Igsf23B2RTN2 239 aa11.23□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Gm21994F6T2D2 329 aa11.23□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Tal2Q62282 108 aa11.23□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Csn3P06796 181 aa11.23□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Egr2P08152 470 aa11.23□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Tmem97Q8VD00 176 aa11.23□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 PmvkQ9D1G2 192 aa11.23□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 SbpP15501 199 aa11.22□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Prss29Q99MS4 279 aa11.22□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Abca12E9Q876 2595 aa11.22□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Cited2O35740 269 aa11.22□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 C1qcQ02105 246 aa11.22□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Ighv1-66A0A075B5X5 117 aa11.22□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Ighv1-52A0A0A6YXC3 117 aa11.22□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Smim1P0C8K7 78 aa11.22□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Defb18Q30KP5 85 aa11.21□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Ovol2Q8CIV7 274 aa11.21□□□□□ -0.61
Nkx3-1-201ENSMUST00000022646 Igkv4-62A0A0G2JDW9 117 aa11.21□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Rpl36-ps4A0A140T8U4 117 aa11.21□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 1500011B03RikQ3TTH7 73 aa11.21□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Gm9242J3QNY1 357 aa11.2□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Ptpn13Q64512 2453 aa11.2□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Fam240aJ3QNP9 97 aa11.2□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 P01837 106 aa11.2□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Pradc1Q9D9N8 188 aa11.2□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Snrpd3P62320 126 aaKnown RBP11.2□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Rpl39P62892 51 aa11.2□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Celsr2Q9R0M0 2920 aa11.19□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Gcn1E9PVA8 2671 aaKnown RBP11.19□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Ccl19O70460 108 aa11.19□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Cox7cP17665 63 aa11.19□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Lrcol1Q3URS3 161 aa11.19□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Ss18Q62280 418 aa11.19□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 A730046J19RikA0A1B0GSN8 89 aa11.19□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Tcrg-C3L7N479 172 aa11.19□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 P03985 172 aa11.19□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Polr2kQ63871 58 aa11.19□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Gphb5Q812B2 130 aa11.19□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Ighv2-7A0A075B5Q8 116 aa11.18□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Gm44965A0A0N4SVR3 59 aa11.18□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 P01812 117 aa11.18□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Samd5Q3V1H9 173 aa11.18□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Clec5aQ9R007 190 aa11.18□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Ighv2-3A0A075B696 115 aa11.18□□□□□ -0.62
Nkx3-1-201ENSMUST00000022646 Igkv2-137A0A0B4J1H6 120 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms