RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Igkv5-37A0A140T8N4 115 aa6.54□□□□□ -1.36
Ssr1-201ENSMUST00000021864 P01837 106 aa6.54□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Tal2Q62282 108 aa6.54□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Mapk1ip1Q9D7G9 263 aa6.54□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Trav14-2A0A075B694 121 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Ighv13-2A0A0A6YWN3 119 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Ndufa12Q7TMF3 145 aaKnown RBP6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Tm2d2Q8R0I4 213 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Rif1Q6PR54 2419 aaKnown RBP6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Ighv1-50A0A075B5W1 117 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Lce6aD3YV94 81 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 P01729 129 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 P01788 123 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Fam110aQ8R184 296 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 UrahQ9CRB3 118 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 AcacbE9Q4Z2 2448 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Slc25a29Q8BL03 306 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Fam24aQ8CF27 98 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Plscr4P58196 326 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Slc25a47Q6IS41 310 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Znrd1Q791N7 123 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 P01739 132 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Q99M08 65 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Gm15294V9GXA7 121 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Olfr313Q5NC55 308 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Spink12Q9D256 87 aa6.53□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Ighv1-52A0A0A6YXC3 117 aa6.52□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Sigmar1O55242 223 aa6.52□□□□□ -1.36
Ssr1-201ENSMUST00000021864 Trav6n-6A0A075B6B2 114 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Zc2hc1aQ8BJH1 324 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Prok2Q9QXU7 128 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Olfr311Q5NC59 308 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 F930015N05RikQ8C3A3 210 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Trav3-4A0A075B654 114 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Igkv3-10A0A0G2JGN0 119 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 P01787 123 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Prok1Q14A28 105 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Ube2aQ9Z255 152 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Gm27027S4R1M6 97 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 6430628N08RikA0A0U1RQ45 177 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 3110021N24RikJ3QMN2 152 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Prop1P97458 223 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Hist2h2beQ64524 126 aa6.52□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Fam241bQ9D882 120 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Olfr312Q7TRZ9 308 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Foxi3E0CZH3 425 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 H2al1nQ497L1 109 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Gm6040Q4QY32 63 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 4930415O20RikQ8CDT5 131 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Atp6v0e2Q91XE7 81 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Gm21994F6T2D2 329 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Foxh1O88621 401 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 BB014433Q8C5R5 389 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Igkv1-122A0A140T8M9 119 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Prss22Q9ER10 306 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Igkv6-13A0A0G2JGY3 119 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Gata1P17679 413 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Sec61gP60060 68 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Tm2d3Q8BJ83 261 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Adamts20P59511 1906 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Lect2O88803 151 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Atp5g3P56384 141 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Atp5g1Q9CR84 136 aa6.51□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Spaca3Q9D9X8 221 aa6.5□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Atp23Q9CWQ3 201 aa6.5□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Pkd1l2Q7TN88 2461 aa6.5□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Mtatp8P03930 67 aa6.5□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Fam240bJ3QMB3 78 aa6.5□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Loxl1P97873 607 aa6.5□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Cox7a1P56392 80 aa6.5□□□□□ -1.37
Ssr1-201ENSMUST00000021864 AmelxP63277 210 aa6.5□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Gm45213A0A0U1RNZ6 101 aa6.49□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Trav4-3A0A0B4J1K1 110 aa6.49□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Trav14-3A0A075B607 120 aa6.49□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Ccl17F6R5P4 103 aa6.49□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Lyg1Q9D7Q0 197 aa6.49□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Gm6034E9Q101 117 aa6.49□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Gm19684G3UZ45 117 aa6.49□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Gm10881P01642 115 aa6.49□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Ighv6-7A0A0A6YWU3 119 aa6.49□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Igkv3-4A0A140T8Q4 119 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 SelenowP63300 88 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Klf11Q8K1S5 502 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Kiaa1549Q68FD9 1940 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Polr3kQ9CQZ7 108 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Tnfrsf26P83626 204 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Rpl18aP62717 176 aaKnown RBP6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Ang4Q3TMQ6 144 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 A930003A15RikQ3U552 87 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Ighv3-1A0A075B5S6 116 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Egr2P08152 470 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 9930022D16RikQ8BG27 128 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 PtprbB2RU80 1998 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Spink8Q09TK9 105 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Gm10251J3QPM5 127 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Ucn2Q99ML8 113 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Gm2916Q9D9B9 127 aa6.48□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Nsun4C4P6S0 806 aaKnown RBP6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 9430069I07RikQ9CX21 111 aa6.47□□□□□ -1.37
Ssr1-201ENSMUST00000021864 Dmrtc1c1Q9D410 238 aa6.47□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 56.3 ms