RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W HSP33Q08914 237 aaKnown RBP3.56□□□□□ -1.84
SRL1YOR247W HSP32Q08992 237 aa3.56□□□□□ -1.84
SRL1YOR247W PUS9Q12069 462 aa3.56□□□□□ -1.84
SRL1YOR247W SUL2Q12325 893 aa3.56□□□□□ -1.84
SRL1YOR247W TRM13Q12383 476 aa3.56□□□□□ -1.84
SRL1YOR247W ERG27Q12452 347 aaKnown RBP3.56□□□□□ -1.84
SRL1YOR247W SEM1O94742 89 aa3.55□□□□□ -1.84
SRL1YOR247W ATP2P00830 511 aaKnown RBP3.55□□□□□ -1.84
SRL1YOR247W CDC16P09798 840 aa3.55□□□□□ -1.84
SRL1YOR247W PRE8P23639 250 aa3.55□□□□□ -1.84
SRL1YOR247W YCR061WP25639 631 aa3.55□□□□□ -1.84
SRL1YOR247W MPE1P35728 441 aaKnown RBP3.55□□□□□ -1.84
SRL1YOR247W CCL1P37366 393 aa3.55□□□□□ -1.84
SRL1YOR247W NOP4P37838 685 aaKnown RBP3.55□□□□□ -1.84
SRL1YOR247W SDH8P38345 138 aa3.55□□□□□ -1.84
SRL1YOR247W CBR1P38626 284 aaKnown RBP3.55□□□□□ -1.84
SRL1YOR247W PIH1P38768 344 aa3.55□□□□□ -1.84
SRL1YOR247W YHR097CP38809 366 aaKnown RBP3.55□□□□□ -1.84
SRL1YOR247W VPS8P39702 1274 aa3.55□□□□□ -1.84
SRL1YOR247W ARB1P40024 610 aaKnown RBP3.55□□□□□ -1.84
SRL1YOR247W YJR061WP40355 935 aa3.55□□□□□ -1.84
SRL1YOR247W YIL161WP40449 235 aaKnown RBP3.55□□□□□ -1.84
SRL1YOR247W DPH1P40487 425 aaKnown RBP3.55□□□□□ -1.84
SRL1YOR247W AIM21P40563 679 aa3.55□□□□□ -1.84
SRL1YOR247W ASE1P50275 885 aa3.55□□□□□ -1.84
SRL1YOR247W YRB30P53107 440 aaPredicted RBP3.55□□□□□ -1.84
SRL1YOR247W RRT6P53117 311 aaPredicted RBP3.55□□□□□ -1.84
SRL1YOR247W CRF1Q04930 467 aa3.55□□□□□ -1.84
SRL1YOR247W VAM6Q07468 1049 aa3.55□□□□□ -1.84
SRL1YOR247W YOL073CQ08232 322 aa3.55□□□□□ -1.84
SRL1YOR247W BMS1Q08965 1183 aaKnown RBP3.55□□□□□ -1.84
SRL1YOR247W NUS1Q12063 375 aa3.55□□□□□ -1.84
SRL1YOR247W RVB2Q12464 471 aaKnown RBP3.55□□□□□ -1.84
SRL1YOR247W AAC3P18238 307 aa3.54□□□□□ -1.84
SRL1YOR247W PDE1P22434 369 aa3.54□□□□□ -1.84
SRL1YOR247W PPS1P38148 807 aa3.54□□□□□ -1.84
SRL1YOR247W KSP1P38691 1029 aaKnown RBP3.54□□□□□ -1.84
SRL1YOR247W YHL017WP38745 532 aa3.54□□□□□ -1.84
SRL1YOR247W NDC80P40460 691 aa3.54□□□□□ -1.84
SRL1YOR247W NMA2P53204 395 aa3.54□□□□□ -1.84
SRL1YOR247W CSL4P53859 292 aaPredicted RBP3.54□□□□□ -1.84
SRL1YOR247W NGL2Q03264 515 aaKnown RBP3.54□□□□□ -1.84
SRL1YOR247W USA1Q03714 838 aa3.54□□□□□ -1.84
SRL1YOR247W GIR2Q03768 265 aaPredicted RBP3.54□□□□□ -1.84
SRL1YOR247W RCO1Q04779 684 aa3.54□□□□□ -1.84
SRL1YOR247W ATG23Q06671 453 aa3.54□□□□□ -1.84
SRL1YOR247W YDL073WQ07454 984 aa3.54□□□□□ -1.84
SRL1YOR247W HUA2Q12134 243 aa3.54□□□□□ -1.84
SRL1YOR247W RKI1Q12189 258 aa3.54□□□□□ -1.84
SRL1YOR247W YBR255C-AQ3E776 120 aa3.54□□□□□ -1.84
SRL1YOR247W TY2A-LR1P0C2J4 438 aa3.53□□□□□ -1.84
SRL1YOR247W TY2A-FP0CX61 438 aa3.53□□□□□ -1.84
SRL1YOR247W TY2A-GR2P0CX62 438 aa3.53□□□□□ -1.84
SRL1YOR247W CDC24P11433 854 aaPredicted RBP3.53□□□□□ -1.84
SRL1YOR247W TY2A-CP25383 438 aa3.53□□□□□ -1.84
SRL1YOR247W CMK1P27466 446 aaKnown RBP3.53□□□□□ -1.84
SRL1YOR247W CNE1P27825 502 aa3.53□□□□□ -1.84
SRL1YOR247W GMH1P36125 273 aa3.53□□□□□ -1.84
SRL1YOR247W GLG1P36143 616 aa3.53□□□□□ -1.84
SRL1YOR247W PCL5P38794 229 aa3.53□□□□□ -1.84
SRL1YOR247W ESL1P40456 1118 aa3.53□□□□□ -1.84
SRL1YOR247W ARC1P46672 376 aaKnown RBP3.53□□□□□ -1.84
SRL1YOR247W UPF3P48412 387 aaKnown RBP3.53□□□□□ -1.84
SRL1YOR247W VPS4P52917 437 aa3.53□□□□□ -1.84
SRL1YOR247W YIP4P53093 235 aa3.53□□□□□ -1.84
SRL1YOR247W RBG2P53295 368 aaKnown RBP3.53□□□□□ -1.84
SRL1YOR247W SPC98P53540 846 aa3.53□□□□□ -1.84
SRL1YOR247W BUD17P53727 317 aa3.53□□□□□ -1.84
SRL1YOR247W SMX3P54999 86 aaPredicted RBP3.53□□□□□ -1.84
SRL1YOR247W TIM44Q01852 431 aa3.53□□□□□ -1.84
SRL1YOR247W FCP1Q03254 732 aa3.53□□□□□ -1.84
SRL1YOR247W TY2A-DR2Q03483 438 aa3.53□□□□□ -1.84
SRL1YOR247W IMH1Q06704 911 aaKnown RBP3.53□□□□□ -1.84
SRL1YOR247W SDH5Q08230 162 aa3.53□□□□□ -1.84
SRL1YOR247W SWT1Q12104 458 aa3.53□□□□□ -1.84
SRL1YOR247W TY2A-BQ12260 438 aa3.53□□□□□ -1.84
SRL1YOR247W TY2A-OR2Q12293 438 aa3.53□□□□□ -1.84
SRL1YOR247W TY2A-DR1Q12392 438 aa3.53□□□□□ -1.84
SRL1YOR247W TY2A-OR1Q12439 438 aa3.53□□□□□ -1.84
SRL1YOR247W YER175W-AQ8TGU4 54 aa3.53□□□□□ -1.84
SRL1YOR247W TY2A-DR3Q99303 438 aa3.53□□□□□ -1.84
SRL1YOR247W CDC15P27636 974 aa3.52□□□□□ -1.85
SRL1YOR247W CDC5P32562 705 aa3.52□□□□□ -1.85
SRL1YOR247W YBL029WP38201 376 aa3.52□□□□□ -1.85
SRL1YOR247W TDP1P38319 544 aa3.52□□□□□ -1.85
SRL1YOR247W YJL206CP39529 758 aa3.52□□□□□ -1.85
SRL1YOR247W LAS21P40367 830 aa3.52□□□□□ -1.85
SRL1YOR247W UBP7P40453 1071 aa3.52□□□□□ -1.85
SRL1YOR247W LYS14P40971 790 aa3.52□□□□□ -1.85
SRL1YOR247W GFD1Q04839 188 aaKnown RBP3.52□□□□□ -1.85
SRL1YOR247W HBT1Q07653 1046 aaKnown RBP3.52□□□□□ -1.85
SRL1YOR247W CRT10Q08226 957 aa3.52□□□□□ -1.85
SRL1YOR247W TMA16Q08687 178 aa3.52□□□□□ -1.85
SRL1YOR247W ACF2Q12168 779 aa3.52□□□□□ -1.85
SRL1YOR247W TAH18Q12181 623 aa3.52□□□□□ -1.85
SRL1YOR247W PCD1Q12524 340 aa3.52□□□□□ -1.85
SRL1YOR247W YOR111WQ99210 232 aa3.52□□□□□ -1.85
SRL1YOR247W PNO1Q99216 274 aaKnown RBP3.52□□□□□ -1.85
SRL1YOR247W LAM4P38800 1345 aa3.51□□□□□ -1.85
SRL1YOR247W AAC1P04710 309 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 72.9 ms