RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C RAD9P14737 1309 aa2.77□□□□□ -1.97
DNL4YOR005C HMG2P12684 1045 aa2.77□□□□□ -1.97
DNL4YOR005C PRP45P28004 379 aaPredicted RBP2.77□□□□□ -1.97
DNL4YOR005C STE14P32584 239 aa2.77□□□□□ -1.97
DNL4YOR005C ATG19P35193 415 aa2.77□□□□□ -1.97
DNL4YOR005C CDS1P38221 457 aa2.77□□□□□ -1.97
DNL4YOR005C PZF1P39933 429 aa2.77□□□□□ -1.97
DNL4YOR005C ZRG8P40021 1076 aa2.77□□□□□ -1.97
DNL4YOR005C FMP10P40098 244 aa2.77□□□□□ -1.97
DNL4YOR005C JEM1P40358 645 aa2.77□□□□□ -1.97
DNL4YOR005C CAB2P40506 365 aa2.77□□□□□ -1.97
DNL4YOR005C CIT3P43635 486 aa2.77□□□□□ -1.97
DNL4YOR005C POL31P46957 487 aa2.77□□□□□ -1.97
DNL4YOR005C JJJ3P47138 172 aa2.77□□□□□ -1.97
DNL4YOR005C TEL2P53038 688 aa2.77□□□□□ -1.97
DNL4YOR005C BUD9P53226 547 aa2.77□□□□□ -1.97
DNL4YOR005C ASI2P53895 289 aa2.77□□□□□ -1.97
DNL4YOR005C PPN1Q04119 674 aa2.77□□□□□ -1.97
DNL4YOR005C RTT109Q07794 436 aa2.77□□□□□ -1.97
DNL4YOR005C SKM1Q12469 655 aa2.77□□□□□ -1.97
DNL4YOR005C SPE1P08432 466 aa2.76□□□□□ -1.97
DNL4YOR005C RNR2P09938 399 aaKnown RBP2.76□□□□□ -1.97
DNL4YOR005C PCK1P10963 549 aa2.76□□□□□ -1.97
DNL4YOR005C RSC6P25632 483 aa2.76□□□□□ -1.97
DNL4YOR005C AIM26P32858 118 aa2.76□□□□□ -1.97
DNL4YOR005C YKL100CP34248 587 aa2.76□□□□□ -1.97
DNL4YOR005C OYE3P41816 400 aaPredicted RBP2.76□□□□□ -1.97
DNL4YOR005C BIT61P47041 543 aa2.76□□□□□ -1.97
DNL4YOR005C YDL183CP48569 320 aa2.76□□□□□ -1.97
DNL4YOR005C PRP31P49704 494 aaPredicted RBP2.76□□□□□ -1.97
DNL4YOR005C PSP2P50109 593 aaKnown RBP2.76□□□□□ -1.97
DNL4YOR005C SQS1P53866 767 aaKnown RBP2.76□□□□□ -1.97
DNL4YOR005C YSA1Q01976 231 aa2.76□□□□□ -1.97
DNL4YOR005C REC102Q02721 264 aa2.76□□□□□ -1.97
DNL4YOR005C RSM24Q03976 319 aa2.76□□□□□ -1.97
DNL4YOR005C ADY4Q05955 493 aa2.76□□□□□ -1.97
DNL4YOR005C MCM21Q06675 368 aa2.76□□□□□ -1.97
DNL4YOR005C UPC2Q12151 913 aa2.76□□□□□ -1.97
DNL4YOR005C COX17Q12287 69 aa2.76□□□□□ -1.97
DNL4YOR005C CYB2P00175 591 aa2.76□□□□□ -1.97
DNL4YOR005C AI3P03877 415 aa2.76□□□□□ -1.97
DNL4YOR005C TPK1P06244 397 aa2.76□□□□□ -1.97
DNL4YOR005C PRP4P20053 465 aaKnown RBP2.76□□□□□ -1.97
DNL4YOR005C DBF4P32325 704 aa2.76□□□□□ -1.97
DNL4YOR005C MRP20P32387 263 aa2.76□□□□□ -1.97
DNL4YOR005C DPH2P32461 534 aa2.76□□□□□ -1.97
DNL4YOR005C URM1P40554 99 aaPredicted RBP2.76□□□□□ -1.97
DNL4YOR005C MND2P40577 368 aa2.76□□□□□ -1.97
DNL4YOR005C CSL4P53859 292 aaPredicted RBP2.76□□□□□ -1.97
DNL4YOR005C ZDS2P54786 942 aa2.76□□□□□ -1.97
DNL4YOR005C VPS60Q03390 229 aa2.76□□□□□ -1.97
DNL4YOR005C VBA4Q04602 768 aaKnown RBP2.76□□□□□ -1.97
DNL4YOR005C RCO1Q04779 684 aa2.76□□□□□ -1.97
DNL4YOR005C YDR286CQ05530 114 aa2.76□□□□□ -1.97
DNL4YOR005C NKP2Q06162 153 aa2.76□□□□□ -1.97
DNL4YOR005C ETT1Q08421 412 aaKnown RBP2.76□□□□□ -1.97
DNL4YOR005C TRE1Q08919 783 aa2.76□□□□□ -1.97
DNL4YOR005C PGC1Q08959 321 aa2.76□□□□□ -1.97
DNL4YOR005C ICL2Q12031 575 aa2.76□□□□□ -1.97
DNL4YOR005C LYS2P07702 1392 aa2.75□□□□□ -1.97
DNL4YOR005C YLR415CO13578 112 aa2.75□□□□□ -1.97
DNL4YOR005C RPB2P08518 1224 aaKnown RBP2.75□□□□□ -1.97
DNL4YOR005C SUI3P09064 285 aaKnown RBP2.75□□□□□ -1.97
DNL4YOR005C ORC2P32833 620 aa2.75□□□□□ -1.97
DNL4YOR005C LTV1P34078 463 aa2.75□□□□□ -1.97
DNL4YOR005C SAS3P34218 831 aa2.75□□□□□ -1.97
DNL4YOR005C CIN4P39110 191 aa2.75□□□□□ -1.97
DNL4YOR005C ECM1P39715 212 aa2.75□□□□□ -1.97
DNL4YOR005C YEL025CP39991 1188 aa2.75□□□□□ -1.97
DNL4YOR005C SPO22P40511 975 aa2.75□□□□□ -1.97
DNL4YOR005C RPS0BP46654 252 aaKnown RBP2.75□□□□□ -1.97
DNL4YOR005C MRX6P48564 524 aa2.75□□□□□ -1.97
DNL4YOR005C FOL2P51601 243 aaKnown RBP2.75□□□□□ -1.97
DNL4YOR005C YBP2P53169 641 aa2.75□□□□□ -1.97
DNL4YOR005C BTN2P53286 410 aa2.75□□□□□ -1.97
DNL4YOR005C RCM1P53972 490 aa2.75□□□□□ -1.97
DNL4YOR005C YLR345WQ06137 509 aa2.75□□□□□ -1.97
DNL4YOR005C WHI4Q07655 649 aaKnown RBP2.75□□□□□ -1.97
DNL4YOR005C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
DNL4YOR005C CIR2Q08822 631 aa2.75□□□□□ -1.97
DNL4YOR005C NMD4Q12129 218 aa2.75□□□□□ -1.97
DNL4YOR005C NBP2Q12163 236 aa2.75□□□□□ -1.97
DNL4YOR005C RTN2Q12443 393 aa2.75□□□□□ -1.97
DNL4YOR005C RPO41P13433 1351 aaKnown RBP2.75□□□□□ -1.97
DNL4YOR005C TUB2P02557 457 aaKnown RBP2.75□□□□□ -1.97
DNL4YOR005C TUB3P09734 445 aaKnown RBP2.75□□□□□ -1.97
DNL4YOR005C CDC24P11433 854 aaPredicted RBP2.75□□□□□ -1.97
DNL4YOR005C PRP22P24384 1145 aaKnown RBP2.75□□□□□ -1.97
DNL4YOR005C SIC1P38634 284 aa2.75□□□□□ -1.97
DNL4YOR005C YHR112CP38716 378 aa2.75□□□□□ -1.97
DNL4YOR005C MAM1P40065 302 aa2.75□□□□□ -1.97
DNL4YOR005C YNL195CP40168 261 aa2.75□□□□□ -1.97
DNL4YOR005C LTP1P40347 161 aa2.75□□□□□ -1.97
DNL4YOR005C VPS9P54787 451 aa2.75□□□□□ -1.97
DNL4YOR005C ATG21Q02887 496 aa2.75□□□□□ -1.97
DNL4YOR005C TRS31Q03337 283 aa2.75□□□□□ -1.97
DNL4YOR005C VAM6Q07468 1049 aa2.75□□□□□ -1.97
DNL4YOR005C SGO1Q08490 590 aa2.75□□□□□ -1.97
DNL4YOR005C SUL2Q12325 893 aa2.75□□□□□ -1.97
DNL4YOR005C YBR126W-AQ8TGU7 68 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms