RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W EMP46Q12396 444 aa6.37□□□□□ -1.39
CAF40YNL288W ERG11P10614 530 aa6.36□□□□□ -1.39
CAF40YNL288W PEX34P25584 144 aa6.36□□□□□ -1.39
CAF40YNL288W STO1P34160 861 aaKnown RBP6.36□□□□□ -1.39
CAF40YNL288W RDH54P38086 958 aa6.36□□□□□ -1.39
CAF40YNL288W ECM13P38195 257 aa6.36□□□□□ -1.39
CAF40YNL288W RCK2P38623 610 aa6.36□□□□□ -1.39
CAF40YNL288W NUP60P39705 539 aa6.36□□□□□ -1.39
CAF40YNL288W AVT2P39981 480 aa6.36□□□□□ -1.39
CAF40YNL288W TMN3P40071 706 aa6.36□□□□□ -1.39
CAF40YNL288W SEC9P40357 651 aa6.36□□□□□ -1.39
CAF40YNL288W CDC1P40986 491 aa6.36□□□□□ -1.39
CAF40YNL288W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
CAF40YNL288W APT1P49435 187 aaKnown RBP6.36□□□□□ -1.39
CAF40YNL288W MON1P53129 644 aa6.36□□□□□ -1.39
CAF40YNL288W BTN2P53286 410 aa6.36□□□□□ -1.39
CAF40YNL288W YNL247WP53852 767 aaKnown RBP6.36□□□□□ -1.39
CAF40YNL288W AIM32Q04689 311 aa6.36□□□□□ -1.39
CAF40YNL288W YDL073WQ07454 984 aa6.36□□□□□ -1.39
CAF40YNL288W SIL1Q08199 421 aa6.36□□□□□ -1.39
CAF40YNL288W THI20Q08224 551 aa6.36□□□□□ -1.39
CAF40YNL288W NDJ1Q12366 352 aa6.36□□□□□ -1.39
CAF40YNL288W RRD2Q12461 358 aa6.36□□□□□ -1.39
CAF40YNL288W GLT1Q12680 2145 aaKnown RBP6.36□□□□□ -1.39
CAF40YNL288W YPR117WQ06116 2489 aa6.36□□□□□ -1.39
CAF40YNL288W HTS1P07263 546 aaKnown RBP6.35□□□□□ -1.39
CAF40YNL288W YPK1P12688 680 aaKnown RBP6.35□□□□□ -1.39
CAF40YNL288W MCM5P29496 775 aaKnown RBP6.35□□□□□ -1.39
CAF40YNL288W YBR053CP38235 358 aa6.35□□□□□ -1.39
CAF40YNL288W HSL7P38274 827 aa6.35□□□□□ -1.39
CAF40YNL288W YBR225WP38321 900 aa6.35□□□□□ -1.39
CAF40YNL288W SWC5P38326 303 aa6.35□□□□□ -1.39
CAF40YNL288W TMA108P40462 946 aa6.35□□□□□ -1.39
CAF40YNL288W SAP185P40856 1058 aa6.35□□□□□ -1.39
CAF40YNL288W PEX31P53203 462 aa6.35□□□□□ -1.39
CAF40YNL288W NCE103P53615 221 aa6.35□□□□□ -1.39
CAF40YNL288W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
CAF40YNL288W GCN5Q03330 439 aa6.35□□□□□ -1.39
CAF40YNL288W GYL1Q04322 720 aa6.35□□□□□ -1.39
CAF40YNL288W IVY1Q04934 453 aa6.35□□□□□ -1.39
CAF40YNL288W ESC2Q06340 456 aa6.35□□□□□ -1.39
CAF40YNL288W VAC14Q06708 880 aa6.35□□□□□ -1.39
CAF40YNL288W YLR001CQ07895 862 aa6.35□□□□□ -1.39
CAF40YNL288W FMP25Q08023 583 aa6.35□□□□□ -1.39
CAF40YNL288W YLL054CQ12244 843 aa6.35□□□□□ -1.39
CAF40YNL288W PMS1P14242 873 aa6.34□□□□□ -1.39
CAF40YNL288W GCD6P32501 712 aaKnown RBP6.34□□□□□ -1.39
CAF40YNL288W KAE1P36132 386 aa6.34□□□□□ -1.39
CAF40YNL288W RRT2P38332 387 aa6.34□□□□□ -1.39
CAF40YNL288W YER189WP40104 122 aa6.34□□□□□ -1.39
CAF40YNL288W ASG1P40467 964 aa6.34□□□□□ -1.39
CAF40YNL288W NGL3Q03210 505 aa6.34□□□□□ -1.39
CAF40YNL288W SPG3Q04398 127 aaPredicted RBP6.34□□□□□ -1.39
CAF40YNL288W YCS4Q06156 1176 aa6.34□□□□□ -1.39
CAF40YNL288W BSP1Q06604 576 aa6.34□□□□□ -1.39
CAF40YNL288W AAD4Q07747 329 aa6.34□□□□□ -1.39
CAF40YNL288W SGO1Q08490 590 aa6.34□□□□□ -1.39
CAF40YNL288W YIG1Q08956 461 aa6.34□□□□□ -1.39
CAF40YNL288W YPQ1Q12010 308 aa6.34□□□□□ -1.39
CAF40YNL288W SVS1Q12254 260 aa6.34□□□□□ -1.39
CAF40YNL288W YLR462WO13556 202 aa6.33□□□□□ -1.4
CAF40YNL288W PET123P17558 318 aa6.33□□□□□ -1.4
CAF40YNL288W TRX1P22217 103 aaKnown RBP6.33□□□□□ -1.4
CAF40YNL288W IMG2P25642 146 aaPredicted RBP6.33□□□□□ -1.4
CAF40YNL288W DUG2P38149 878 aa6.33□□□□□ -1.4
CAF40YNL288W ATG12P38316 186 aa6.33□□□□□ -1.4
CAF40YNL288W YHL049CP38722 271 aa6.33□□□□□ -1.4
CAF40YNL288W YIL054WP40524 105 aa6.33□□□□□ -1.4
CAF40YNL288W YFL064CP43540 174 aa6.33□□□□□ -1.4
CAF40YNL288W GCV1P48015 400 aa6.33□□□□□ -1.4
CAF40YNL288W BRO1P48582 844 aa6.33□□□□□ -1.4
CAF40YNL288W YGR283CP53336 341 aaPredicted RBP6.33□□□□□ -1.4
CAF40YNL288W COP1P53622 1201 aaKnown RBP6.33□□□□□ -1.4
CAF40YNL288W BOP3P53958 396 aa6.33□□□□□ -1.4
CAF40YNL288W SND1Q04007 877 aa6.33□□□□□ -1.4
CAF40YNL288W SML1Q04964 104 aa6.33□□□□□ -1.4
CAF40YNL288W THI21Q08975 551 aa6.33□□□□□ -1.4
CAF40YNL288W YOR223WQ12015 292 aa6.33□□□□□ -1.4
CAF40YNL288W LCB4Q12246 624 aa6.33□□□□□ -1.4
CAF40YNL288W ARP7Q12406 477 aa6.33□□□□□ -1.4
CAF40YNL288W YBL111CQ3E7Y5 667 aa6.33□□□□□ -1.4
CAF40YNL288W PHO4P07270 312 aaKnown RBP6.32□□□□□ -1.4
CAF40YNL288W BET2P20133 325 aa6.32□□□□□ -1.4
CAF40YNL288W PPH22P23595 377 aa6.32□□□□□ -1.4
CAF40YNL288W YIH1P25637 258 aa6.32□□□□□ -1.4
CAF40YNL288W YBL055CP34220 418 aaPredicted RBP6.32□□□□□ -1.4
CAF40YNL288W COY1P34237 679 aa6.32□□□□□ -1.4
CAF40YNL288W PCA1P38360 1216 aa6.32□□□□□ -1.4
CAF40YNL288W ERP2P39704 215 aa6.32□□□□□ -1.4
CAF40YNL288W LCP5P40079 357 aaPredicted RBP6.32□□□□□ -1.4
CAF40YNL288W RTT101P47050 842 aa6.32□□□□□ -1.4
CAF40YNL288W NOG2P53742 486 aaKnown RBP6.32□□□□□ -1.4
CAF40YNL288W DIG1Q03063 452 aaKnown RBP6.32□□□□□ -1.4
CAF40YNL288W RKM2Q03942 479 aa6.32□□□□□ -1.4
CAF40YNL288W UFO1Q04511 668 aa6.32□□□□□ -1.4
CAF40YNL288W KAP95Q06142 861 aaKnown RBP6.32□□□□□ -1.4
CAF40YNL288W YLR122CQ12312 125 aa6.32□□□□□ -1.4
CAF40YNL288W RPS9AO13516 197 aaKnown RBP6.31□□□□□ -1.4
CAF40YNL288W PAB1P04147 577 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
CAF40YNL288W TUB3P09734 445 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms